RNA–Protein interactions for RNA: YMR086W

SEG1, Transcript of Component of eisosome required for proper eisosome assembly, yeast

Gene SEG1, Length 2,883 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SEG1	YMR086W	AHC1	Q12433	566 aa		4	□□□□□ -1.77
SEG1	YMR086W	BI4	P03879	638 aa		4	□□□□□ -1.77
SEG1	YMR086W	FBP1	P09201	348 aa		4	□□□□□ -1.77
SEG1	YMR086W	RGR1	P19263	1082 aa		4	□□□□□ -1.77
SEG1	YMR086W	DBP2	P24783	546 aa	Known RBP	4	□□□□□ -1.77
SEG1	YMR086W	YME2	P32843	850 aa		4	□□□□□ -1.77
SEG1	YMR086W	YBR225W	P38321	900 aa		4	□□□□□ -1.77
SEG1	YMR086W	REI1	P38344	393 aa	Predicted RBP	4	□□□□□ -1.77
SEG1	YMR086W	PRM9	P39551	298 aa		4	□□□□□ -1.77
SEG1	YMR086W	ZRG8	P40021	1076 aa		4	□□□□□ -1.77
SEG1	YMR086W	MNT2	P53059	558 aa		4	□□□□□ -1.77
SEG1	YMR086W	ARP5	P53946	755 aa		4	□□□□□ -1.77
SEG1	YMR086W	DCS1	Q06151	350 aa		4	□□□□□ -1.77
SEG1	YMR086W	MDM12	Q92328	271 aa		4	□□□□□ -1.77
SEG1	YMR086W	STE6	P12866	1290 aa		3.99	□□□□□ -1.77
SEG1	YMR086W	BAS1	P22035	811 aa		3.99	□□□□□ -1.77
SEG1	YMR086W	MNE1	P24720	663 aa		3.99	□□□□□ -1.77
SEG1	YMR086W	DBP1	P24784	617 aa	Known RBP	3.99	□□□□□ -1.77
SEG1	YMR086W	TYS1	P36421	394 aa	Known RBP	3.99	□□□□□ -1.77
SEG1	YMR086W	SEA4	P38164	1038 aa		3.99	□□□□□ -1.77
SEG1	YMR086W	PBY1	P38254	753 aa		3.99	□□□□□ -1.77
SEG1	YMR086W	MED8	P38304	223 aa		3.99	□□□□□ -1.77
SEG1	YMR086W	AXL2	P38928	823 aa		3.99	□□□□□ -1.77
SEG1	YMR086W	YNR063W	P53749	607 aa		3.99	□□□□□ -1.77
SEG1	YMR086W	MRPS17	Q03246	237 aa	Predicted RBP	3.99	□□□□□ -1.77
SEG1	YMR086W	ECM11	Q04110	302 aa		3.99	□□□□□ -1.77
SEG1	YMR086W	HFD1	Q04458	532 aa		3.99	□□□□□ -1.77
SEG1	YMR086W	SMC5	Q08204	1093 aa		3.99	□□□□□ -1.77
SEG1	YMR086W	CIR2	Q08822	631 aa		3.99	□□□□□ -1.77
SEG1	YMR086W	FAP7	Q12055	197 aa	Predicted RBP	3.99	□□□□□ -1.77
SEG1	YMR086W	CHS5	Q12114	671 aa	Known RBP	3.99	□□□□□ -1.77
SEG1	YMR086W	HAL9	Q12180	1030 aa		3.99	□□□□□ -1.77
SEG1	YMR086W	RPS24A	P0CX31	135 aa	Known RBP	3.99	□□□□□ -1.77
SEG1	YMR086W	RPS24B	P0CX32	135 aa	Known RBP	3.99	□□□□□ -1.77
SEG1	YMR086W	CAF20	P12962	161 aa	Known RBP	3.99	□□□□□ -1.77
SEG1	YMR086W	FUR1	P18562	216 aa	Known RBP	3.99	□□□□□ -1.77
SEG1	YMR086W	DAL7	P21826	554 aa		3.99	□□□□□ -1.77
SEG1	YMR086W	SEG2	P34250	1132 aa		3.99	□□□□□ -1.77
SEG1	YMR086W	PCS60	P38137	543 aa	Known RBP RIP-Chip data	3.99	□□□□□ -1.77	not detected
SEG1	YMR086W	VMA13	P41807	478 aa	Known RBP	3.99	□□□□□ -1.77
SEG1	YMR086W	SPR3	P41901	512 aa		3.99	□□□□□ -1.77
SEG1	YMR086W	BBC1	P47068	1157 aa		3.99	□□□□□ -1.77
SEG1	YMR086W	SSN8	P47821	323 aa		3.99	□□□□□ -1.77
SEG1	YMR086W	YGL242C	P53066	181 aa		3.99	□□□□□ -1.77
SEG1	YMR086W	DIP5	P53388	608 aa		3.99	□□□□□ -1.77
SEG1	YMR086W	RTT103	Q05543	409 aa		3.99	□□□□□ -1.77
SEG1	YMR086W	FUS2	Q05670	677 aa		3.99	□□□□□ -1.77
SEG1	YMR086W	YLL032C	Q07834	825 aa	Known RBP RIP-Chip data	3.99	□□□□□ -1.77	not detected
SEG1	YMR086W	FMP25	Q08023	583 aa		3.99	□□□□□ -1.77
SEG1	YMR086W	APC11	Q12157	165 aa		3.99	□□□□□ -1.77
SEG1	YMR086W	SNF1	P06782	633 aa	Known RBP	3.98	□□□□□ -1.77
SEG1	YMR086W	SRD1	P09007	221 aa		3.98	□□□□□ -1.77
SEG1	YMR086W	DAP2	P18962	818 aa		3.98	□□□□□ -1.77
SEG1	YMR086W	YUH1	P35127	236 aa		3.98	□□□□□ -1.77
SEG1	YMR086W	SPT8	P38915	602 aa		3.98	□□□□□ -1.77
SEG1	YMR086W	MND2	P40577	368 aa		3.98	□□□□□ -1.77
SEG1	YMR086W	ROK1	P45818	564 aa	Predicted RBP	3.98	□□□□□ -1.77
SEG1	YMR086W	TIM21	P53220	239 aa		3.98	□□□□□ -1.77
SEG1	YMR086W	YNL146W	P53906	100 aa		3.98	□□□□□ -1.77
SEG1	YMR086W	PEX25	Q02969	394 aa		3.98	□□□□□ -1.77
SEG1	YMR086W	TRM8	Q12009	286 aa		3.98	□□□□□ -1.77
SEG1	YMR086W	TAH18	Q12181	623 aa		3.98	□□□□□ -1.77
SEG1	YMR086W	YOL159C-A	Q3E769	90 aa		3.98	□□□□□ -1.77
SEG1	YMR086W	LAG2	Q92325	660 aa		3.98	□□□□□ -1.77
SEG1	YMR086W	YRF1-4	O13559	1382 aa		3.98	□□□□□ -1.77
SEG1	YMR086W	YML133C	Q03099	1374 aa		3.98	□□□□□ -1.77
SEG1	YMR086W	YLL067C	Q07888	1374 aa		3.98	□□□□□ -1.77
SEG1	YMR086W	YLL066C	Q99208	1374 aa		3.98	□□□□□ -1.77
SEG1	YMR086W	GPI10	P30777	616 aa		3.98	□□□□□ -1.77
SEG1	YMR086W	MLS1	P30952	554 aa		3.98	□□□□□ -1.77
SEG1	YMR086W	FUN30	P31380	1131 aa		3.98	□□□□□ -1.77
SEG1	YMR086W	HEM12	P32347	362 aa	Predicted RBP	3.98	□□□□□ -1.77
SEG1	YMR086W	MDL1	P33310	695 aa		3.98	□□□□□ -1.77
SEG1	YMR086W	SHM2	P37291	469 aa	Known RBP	3.98	□□□□□ -1.77
SEG1	YMR086W	GDH3	P39708	457 aa		3.98	□□□□□ -1.77
SEG1	YMR086W	FLC2	P39719	783 aa		3.98	□□□□□ -1.77
SEG1	YMR086W	TIF4631	P39935	952 aa	Known RBP	3.98	□□□□□ -1.77
SEG1	YMR086W	YER137C	P40083	148 aa	Known RBP	3.98	□□□□□ -1.77
SEG1	YMR086W	CCT7	P42943	550 aa	Known RBP	3.98	□□□□□ -1.77
SEG1	YMR086W	CAF120	P53836	1060 aa		3.98	□□□□□ -1.77
SEG1	YMR086W	YDR444W	Q04093	687 aa		3.98	□□□□□ -1.77
SEG1	YMR086W	RTN1	Q04947	295 aa	Known RBP	3.98	□□□□□ -1.77
SEG1	YMR086W	PEX19	Q07418	342 aa		3.98	□□□□□ -1.77
SEG1	YMR086W	NGL1	Q08213	363 aa	Known RBP	3.98	□□□□□ -1.77
SEG1	YMR086W	VPS54	Q12071	889 aa		3.98	□□□□□ -1.77
SEG1	YMR086W	NUP145	P49687	1317 aa		3.98	□□□□□ -1.77
SEG1	YMR086W	HXK2	P04807	486 aa	Known RBP	3.97	□□□□□ -1.77
SEG1	YMR086W	MET17	P06106	444 aa		3.97	□□□□□ -1.77
SEG1	YMR086W	HO	P09932	586 aa		3.97	□□□□□ -1.77
SEG1	YMR086W	OLE1	P21147	510 aa	Known RBP	3.97	□□□□□ -1.77
SEG1	YMR086W	ISF1	P32488	338 aa		3.97	□□□□□ -1.77
SEG1	YMR086W	YME1	P32795	747 aa		3.97	□□□□□ -1.77
SEG1	YMR086W	AFR1	P33304	620 aa		3.97	□□□□□ -1.77
SEG1	YMR086W	DUR3	P33413	735 aa		3.97	□□□□□ -1.77
SEG1	YMR086W	STS1	P38637	319 aa		3.97	□□□□□ -1.77
SEG1	YMR086W	YRB1	P41920	201 aa	Known RBP	3.97	□□□□□ -1.77
SEG1	YMR086W	DLD2	P46681	530 aa	Known RBP	3.97	□□□□□ -1.77
SEG1	YMR086W	GCD14	P46959	383 aa	Predicted RBP	3.97	□□□□□ -1.77
SEG1	YMR086W	URB2	P47108	1174 aa		3.97	□□□□□ -1.77
SEG1	YMR086W	YMR1	P47147	688 aa	Known RBP RIP-Chip data	3.97	□□□□□ -1.77	not detected

Retrieved 100 of 5,963 RNA–protein pairs in 151.1 ms