RNA–Protein interactions for RNA: YMR044W

IOC4, Transcript of Member of a complex (Isw1b) with Isw1p and Ioc2p, yeast

Gene IOC4, Length 1,428 nt, Biotype protein coding, Subcellular localisation Mitochondria .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
IOC4	YMR044W	PEX5	P35056	612 aa		4.85	□□□□□ -1.63
IOC4	YMR044W	CCT8	P47079	568 aa	Known RBP	4.85	□□□□□ -1.63
IOC4	YMR044W	SGM1	P47166	707 aa		4.85	□□□□□ -1.63
IOC4	YMR044W	NSG2	P53898	299 aa		4.85	□□□□□ -1.63
IOC4	YMR044W	SSY1	Q03770	852 aa		4.85	□□□□□ -1.63
IOC4	YMR044W	CDA1	Q06702	301 aa		4.85	□□□□□ -1.63
IOC4	YMR044W	SDH5	Q08230	162 aa		4.85	□□□□□ -1.63
IOC4	YMR044W	THI21	Q08975	551 aa		4.85	□□□□□ -1.63
IOC4	YMR044W	PHM7	Q12252	991 aa		4.85	□□□□□ -1.63
IOC4	YMR044W	DGR2	P32330	852 aa		4.84	□□□□□ -1.63
IOC4	YMR044W	RPT3	P33298	428 aa	Known RBP	4.84	□□□□□ -1.63
IOC4	YMR044W	PXA2	P34230	853 aa		4.84	□□□□□ -1.63
IOC4	YMR044W	YKL050C	P35736	922 aa		4.84	□□□□□ -1.63
IOC4	YMR044W	MUD2	P36084	527 aa	Known RBP	4.84	□□□□□ -1.63
IOC4	YMR044W	YKR018C	P36114	725 aa		4.84	□□□□□ -1.63
IOC4	YMR044W	SRP68	P38687	599 aa	Known RBP	4.84	□□□□□ -1.63
IOC4	YMR044W	STL1	P39932	569 aa		4.84	□□□□□ -1.63
IOC4	YMR044W	YIL108W	P40483	696 aa	Known RBP	4.84	□□□□□ -1.63
IOC4	YMR044W	FAF1	P40546	346 aa	Predicted RBP	4.84	□□□□□ -1.63
IOC4	YMR044W	RBG2	P53295	368 aa	Known RBP	4.84	□□□□□ -1.63
IOC4	YMR044W	MSC2	Q03455	724 aa		4.84	□□□□□ -1.63
IOC4	YMR044W	YLR352W	Q06479	807 aa		4.84	□□□□□ -1.63
IOC4	YMR044W	NGL1	Q08213	363 aa	Known RBP	4.84	□□□□□ -1.63
IOC4	YMR044W	DCS2	Q12123	353 aa		4.84	□□□□□ -1.63
IOC4	YMR044W	KIN2	P13186	1147 aa	Known RBP	4.83	□□□□□ -1.64
IOC4	YMR044W	PGM1	P33401	570 aa	Known RBP	4.83	□□□□□ -1.64
IOC4	YMR044W	TAT1	P38085	619 aa		4.83	□□□□□ -1.64
IOC4	YMR044W	FLR1	P38124	548 aa		4.83	□□□□□ -1.64
IOC4	YMR044W	POA1	P38218	177 aa		4.83	□□□□□ -1.64
IOC4	YMR044W	UBS1	P38290	277 aa		4.83	□□□□□ -1.64
IOC4	YMR044W	BCD1	P38772	366 aa		4.83	□□□□□ -1.64
IOC4	YMR044W	YHR202W	P38887	602 aa		4.83	□□□□□ -1.64
IOC4	YMR044W	EAF5	P39995	279 aa		4.83	□□□□□ -1.64
IOC4	YMR044W	NOP16	P40007	231 aa	Known RBP	4.83	□□□□□ -1.64
IOC4	YMR044W	SCS2	P40075	244 aa	Known RBP	4.83	□□□□□ -1.64
IOC4	YMR044W	PUS2	P53167	370 aa		4.83	□□□□□ -1.64
IOC4	YMR044W	RSC1	P53236	928 aa		4.83	□□□□□ -1.64
IOC4	YMR044W	YMR187C	Q03236	431 aa		4.83	□□□□□ -1.64
IOC4	YMR044W	SGD1	Q06132	899 aa		4.83	□□□□□ -1.64
IOC4	YMR044W	GCD1	P09032	578 aa	Predicted RBP	4.82	□□□□□ -1.64
IOC4	YMR044W	SWI6	P09959	803 aa		4.82	□□□□□ -1.64
IOC4	YMR044W	HSF1	P10961	833 aa		4.82	□□□□□ -1.64
IOC4	YMR044W	GLN4	P13188	809 aa	Known RBP	4.82	□□□□□ -1.64
IOC4	YMR044W	FUR1	P18562	216 aa	Known RBP	4.82	□□□□□ -1.64
IOC4	YMR044W	MSB1	P21339	1137 aa	Known RBP	4.82	□□□□□ -1.64
IOC4	YMR044W	CDC60	P26637	1090 aa	Known RBP	4.82	□□□□□ -1.64
IOC4	YMR044W	CMK1	P27466	446 aa	Known RBP	4.82	□□□□□ -1.64
IOC4	YMR044W	TGL1	P34163	548 aa		4.82	□□□□□ -1.64
IOC4	YMR044W	SPC72	P39723	622 aa		4.82	□□□□□ -1.64
IOC4	YMR044W	YEL068C	P39977	110 aa		4.82	□□□□□ -1.64
IOC4	YMR044W	VHR1	P40522	640 aa		4.82	□□□□□ -1.64
IOC4	YMR044W	VID28	P40547	921 aa		4.82	□□□□□ -1.64
IOC4	YMR044W	MAD3	P47074	515 aa		4.82	□□□□□ -1.64
IOC4	YMR044W	PCL10	P53124	433 aa		4.82	□□□□□ -1.64
IOC4	YMR044W	YGR012W	P53206	393 aa		4.82	□□□□□ -1.64
IOC4	YMR044W	DUS1	P53759	423 aa	Known RBP	4.82	□□□□□ -1.64
IOC4	YMR044W	ARP4	P80428	489 aa		4.82	□□□□□ -1.64
IOC4	YMR044W	MEH1	Q02205	184 aa		4.82	□□□□□ -1.64
IOC4	YMR044W	TIM50	Q02776	476 aa		4.82	□□□□□ -1.64
IOC4	YMR044W	RSM24	Q03976	319 aa		4.82	□□□□□ -1.64
IOC4	YMR044W	SIZ1	Q04195	904 aa		4.82	□□□□□ -1.64
IOC4	YMR044W	GSF2	Q04697	403 aa	Known RBP	4.82	□□□□□ -1.64
IOC4	YMR044W	YLR287C	Q05881	355 aa		4.82	□□□□□ -1.64
IOC4	YMR044W	MCA1	Q08601	432 aa		4.82	□□□□□ -1.64
IOC4	YMR044W	MCH5	Q08777	521 aa		4.82	□□□□□ -1.64
IOC4	YMR044W	PSF3	Q12146	194 aa		4.82	□□□□□ -1.64
IOC4	YMR044W	TAH18	Q12181	623 aa		4.82	□□□□□ -1.64
IOC4	YMR044W	LEU2	P04173	364 aa	Predicted RBP	4.81	□□□□□ -1.64
IOC4	YMR044W	CHS2	P14180	963 aa		4.81	□□□□□ -1.64
IOC4	YMR044W	AAC3	P18238	307 aa		4.81	□□□□□ -1.64
IOC4	YMR044W	PGS1	P25578	521 aa		4.81	□□□□□ -1.64
IOC4	YMR044W	COQ2	P32378	372 aa		4.81	□□□□□ -1.64
IOC4	YMR044W	TAF5	P38129	798 aa		4.81	□□□□□ -1.64
IOC4	YMR044W	LAM1	P38851	1228 aa		4.81	□□□□□ -1.64
IOC4	YMR044W	ZRG8	P40021	1076 aa		4.81	□□□□□ -1.64
IOC4	YMR044W	PSF2	P40359	213 aa		4.81	□□□□□ -1.64
IOC4	YMR044W	YJR039W	P47107	1121 aa		4.81	□□□□□ -1.64
IOC4	YMR044W	SAP4	P53036	818 aa		4.81	□□□□□ -1.64
IOC4	YMR044W	ARC35	P53731	342 aa	Known RBP	4.81	□□□□□ -1.64
IOC4	YMR044W	NOP15	P53927	220 aa	Predicted RBP	4.81	□□□□□ -1.64
IOC4	YMR044W	SPN1	Q06505	410 aa	Predicted RBP	4.81	□□□□□ -1.64
IOC4	YMR044W	IMH1	Q06704	911 aa	Known RBP	4.81	□□□□□ -1.64
IOC4	YMR044W	YLR122C	Q12312	125 aa		4.81	□□□□□ -1.64
IOC4	YMR044W	HSH49	Q99181	213 aa	Predicted RBP	4.81	□□□□□ -1.64
IOC4	YMR044W	SNF1	P06782	633 aa	Known RBP	4.8	□□□□□ -1.64
IOC4	YMR044W	VAS1	P07806	1104 aa	Known RBP	4.8	□□□□□ -1.64
IOC4	YMR044W	FBP1	P09201	348 aa		4.8	□□□□□ -1.64
IOC4	YMR044W	ADH4	P10127	382 aa		4.8	□□□□□ -1.64
IOC4	YMR044W	PAH1	P32567	862 aa		4.8	□□□□□ -1.64
IOC4	YMR044W	SSZ1	P38788	538 aa	Known RBP	4.8	□□□□□ -1.64
IOC4	YMR044W	UME6	P39001	836 aa		4.8	□□□□□ -1.64
IOC4	YMR044W	SWD1	P39706	426 aa		4.8	□□□□□ -1.64
IOC4	YMR044W	IRC5	P43610	853 aa		4.8	□□□□□ -1.64
IOC4	YMR044W	UPF3	P48412	387 aa	Known RBP	4.8	□□□□□ -1.64
IOC4	YMR044W	PUS4	P48567	403 aa	Known RBP	4.8	□□□□□ -1.64
IOC4	YMR044W	MRPL19	P53875	158 aa		4.8	□□□□□ -1.64
IOC4	YMR044W	CBK1	P53894	756 aa		4.8	□□□□□ -1.64
IOC4	YMR044W	ERO1	Q03103	563 aa		4.8	□□□□□ -1.64
IOC4	YMR044W	RCF1	Q03713	159 aa		4.8	□□□□□ -1.64
IOC4	YMR044W	TDA9	Q04545	1251 aa		4.8	□□□□□ -1.64

Retrieved 100 of 5,963 RNA–protein pairs in 55.8 ms