RNA–Protein interactions for RNA: YMR017W

SPO20, Transcript of Meiosis-specific subunit of the t-SNARE complex, yeastyeast

Gene SPO20, Length 1,194 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SPO20YMR017W SUN4P53616 420 aa5.66□□□□□ -1.5
SPO20YMR017W CTK1Q03957 528 aaKnown RBP5.66□□□□□ -1.5
SPO20YMR017W ISA1Q07821 250 aaPredicted RBP5.66□□□□□ -1.5
SPO20YMR017W HRP1Q99383 534 aaKnown RBP5.66□□□□□ -1.5
SPO20YMR017W ALG7P07286 448 aa5.65□□□□□ -1.5
SPO20YMR017W SWI6P09959 803 aa5.65□□□□□ -1.5
SPO20YMR017W RNR1P21524 888 aaKnown RBP5.65□□□□□ -1.5
SPO20YMR017W ERG6P25087 383 aaKnown RBP5.65□□□□□ -1.5
SPO20YMR017W IMG2P25642 146 aaPredicted RBP5.65□□□□□ -1.5
SPO20YMR017W SEC65P29478 273 aa5.65□□□□□ -1.5
SPO20YMR017W EUG1P32474 517 aa5.65□□□□□ -1.5
SPO20YMR017W OAF3P36023 863 aa5.65□□□□□ -1.5
SPO20YMR017W PAF1P38351 445 aa5.65□□□□□ -1.5
SPO20YMR017W BAP3P41815 604 aa5.65□□□□□ -1.5
SPO20YMR017W YJR120WP47157 116 aa5.65□□□□□ -1.5
SPO20YMR017W MSE1P48525 536 aa5.65□□□□□ -1.5
SPO20YMR017W MTL1P53214 551 aa5.65□□□□□ -1.5
SPO20YMR017W PTA1Q01329 785 aaPredicted RBP5.65□□□□□ -1.5
SPO20YMR017W ADY4Q05955 493 aa5.65□□□□□ -1.5
SPO20YMR017W YLR407WQ06070 228 aa5.65□□□□□ -1.5
SPO20YMR017W TRE2Q08693 809 aa5.65□□□□□ -1.5
SPO20YMR017W PPR1P07272 904 aaPredicted RBP5.64□□□□□ -1.51
SPO20YMR017W RPS21AP0C0V8 87 aaKnown RBP5.64□□□□□ -1.51
SPO20YMR017W LYS9P38999 446 aa5.64□□□□□ -1.51
SPO20YMR017W YNL195CP40168 261 aa5.64□□□□□ -1.51
SPO20YMR017W YJL163CP46996 555 aa5.64□□□□□ -1.51
SPO20YMR017W YMR210WQ03649 449 aa5.64□□□□□ -1.51
SPO20YMR017W YOL073CQ08232 322 aa5.64□□□□□ -1.51
SPO20YMR017W SGO1Q08490 590 aa5.64□□□□□ -1.51
SPO20YMR017W HFI1Q12060 488 aa5.64□□□□□ -1.51
SPO20YMR017W APM4Q99186 491 aa5.64□□□□□ -1.51
SPO20YMR017W ECM3Q99252 613 aa5.64□□□□□ -1.51
SPO20YMR017W YKU70P32807 602 aa5.63□□□□□ -1.51
SPO20YMR017W BCD1P38772 366 aa5.63□□□□□ -1.51
SPO20YMR017W GET2P40056 285 aa5.63□□□□□ -1.51
SPO20YMR017W DUG1P43616 481 aaKnown RBP5.63□□□□□ -1.51
SPO20YMR017W IRC13Q08630 104 aa5.63□□□□□ -1.51
SPO20YMR017W PUS9Q12069 462 aa5.63□□□□□ -1.51
SPO20YMR017W MRC1P25588 1096 aa5.62□□□□□ -1.51
SPO20YMR017W DAL3P32459 195 aa5.62□□□□□ -1.51
SPO20YMR017W YBR071WP38243 211 aa5.62□□□□□ -1.51
SPO20YMR017W FMO1P38866 432 aa5.62□□□□□ -1.51
SPO20YMR017W CCT3P39077 534 aaKnown RBP5.62□□□□□ -1.51
SPO20YMR017W NOP9P47077 666 aaKnown RBP5.62□□□□□ -1.51
SPO20YMR017W NOP15P53927 220 aaPredicted RBP5.62□□□□□ -1.51
SPO20YMR017W GSF2Q04697 403 aaKnown RBP5.62□□□□□ -1.51
SPO20YMR017W VHS3Q08438 674 aa5.62□□□□□ -1.51
SPO20YMR017W RMP1Q12530 201 aa5.62□□□□□ -1.51
SPO20YMR017W AEP2P22136 580 aa5.61□□□□□ -1.51
SPO20YMR017W PET127P32606 800 aa5.61□□□□□ -1.51
SPO20YMR017W HIS7P33734 552 aaKnown RBP5.61□□□□□ -1.51
SPO20YMR017W FAT1P38225 669 aa5.61□□□□□ -1.51
SPO20YMR017W GPP2P40106 250 aaKnown RBP5.61□□□□□ -1.51
SPO20YMR017W UBC11P52492 156 aa5.61□□□□□ -1.51
SPO20YMR017W FOL1P53848 824 aa5.61□□□□□ -1.51
SPO20YMR017W YPS7Q06325 596 aa5.61□□□□□ -1.51
SPO20YMR017W VPS36Q06696 566 aa5.61□□□□□ -1.51
SPO20YMR017W RPS17AP02407 136 aaKnown RBP5.6□□□□□ -1.51
SPO20YMR017W ERG20P08524 352 aaKnown RBP5.6□□□□□ -1.51
SPO20YMR017W RPS17BP14127 136 aaKnown RBP5.6□□□□□ -1.51
SPO20YMR017W FRS1P15624 595 aaKnown RBP5.6□□□□□ -1.51
SPO20YMR017W MVD1P32377 396 aaKnown RBP5.6□□□□□ -1.51
SPO20YMR017W PPS1P38148 807 aa5.6□□□□□ -1.51
SPO20YMR017W CHS7P38843 316 aa5.6□□□□□ -1.51
SPO20YMR017W NUP60P39705 539 aa5.6□□□□□ -1.51
SPO20YMR017W FMP52P40008 231 aa5.6□□□□□ -1.51
SPO20YMR017W RSC8P43609 557 aaKnown RBP5.6□□□□□ -1.51
SPO20YMR017W NIT2P47016 307 aa5.6□□□□□ -1.51
SPO20YMR017W COG6P53959 839 aa5.6□□□□□ -1.51
SPO20YMR017W RCR2Q03446 210 aaKnown RBP5.6□□□□□ -1.51
SPO20YMR017W GLN4P13188 809 aaKnown RBP5.59□□□□□ -1.51
SPO20YMR017W PEX1P24004 1043 aa5.59□□□□□ -1.51
SPO20YMR017W TOM20P35180 183 aa5.59□□□□□ -1.51
SPO20YMR017W RGC1Q06108 1083 aaKnown RBP5.59□□□□□ -1.51
SPO20YMR017W THI22Q06490 572 aa5.59□□□□□ -1.51
SPO20YMR017W DIA2Q08496 732 aaPredicted RBP5.59□□□□□ -1.51
SPO20YMR017W YPR027CQ12079 277 aa5.59□□□□□ -1.51
SPO20YMR017W HIR1P32479 840 aa5.58□□□□□ -1.52
SPO20YMR017W SER1P33330 395 aaKnown RBP5.58□□□□□ -1.52
SPO20YMR017W DUN1P39009 513 aa5.58□□□□□ -1.52
SPO20YMR017W VID28P40547 921 aa5.58□□□□□ -1.52
SPO20YMR017W SKY1Q03656 742 aa5.58□□□□□ -1.52
SPO20YMR017W IME1P21190 360 aa5.57□□□□□ -1.52
SPO20YMR017W ENP1P38333 483 aaKnown RBP5.57□□□□□ -1.52
SPO20YMR017W REV7P38927 245 aa5.57□□□□□ -1.52
SPO20YMR017W IES1P43579 692 aa5.57□□□□□ -1.52
SPO20YMR017W DAS1P47005 663 aa5.57□□□□□ -1.52
SPO20YMR017W BIT61P47041 543 aa5.57□□□□□ -1.52
SPO20YMR017W RNR4P49723 345 aaKnown RBP5.57□□□□□ -1.52
SPO20YMR017W PAN2P53010 1115 aaPredicted RBP5.57□□□□□ -1.52
SPO20YMR017W PEX14P53112 341 aa5.57□□□□□ -1.52
SPO20YMR017W YMR206WQ03695 313 aa5.57□□□□□ -1.52
SPO20YMR017W VBA4Q04602 768 aaKnown RBP5.57□□□□□ -1.52
SPO20YMR017W OMS1Q06668 471 aa5.57□□□□□ -1.52
SPO20YMR017W STP4Q07351 490 aa5.57□□□□□ -1.52
SPO20YMR017W POM34Q12445 299 aa5.57□□□□□ -1.52
SPO20YMR017W SIR3P06701 978 aa5.56□□□□□ -1.52
SPO20YMR017W YPT7P32939 208 aa5.56□□□□□ -1.52
SPO20YMR017W TFC4P33339 1025 aa5.56□□□□□ -1.52
SPO20YMR017W SFB3P38810 929 aa5.56□□□□□ -1.52
Retrieved 100 of 5,963 RNA–protein pairs in 17.9 ms