RNA–Protein interactions for RNA: YLR394W

CST9, Transcript of SUMO E3 ligase, yeast

Gene CST9, Length 1,449 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
CST9	YLR394W	RET2	P43621	546 aa		4.29	□□□□□ -1.72
CST9	YLR394W	MUP1	P50276	574 aa		4.29	□□□□□ -1.72
CST9	YLR394W	ORC4	P54791	529 aa		4.29	□□□□□ -1.72
CST9	YLR394W	HMO1	Q03973	246 aa	Known RBP	4.29	□□□□□ -1.72
CST9	YLR394W	HFD1	Q04458	532 aa		4.29	□□□□□ -1.72
CST9	YLR394W	TMA17	Q12513	150 aa		4.29	□□□□□ -1.72
CST9	YLR394W	EUG1	P32474	517 aa		4.28	□□□□□ -1.72
CST9	YLR394W	ENP1	P38333	483 aa	Known RBP	4.28	□□□□□ -1.72
CST9	YLR394W	YBR259W	P38338	688 aa		4.28	□□□□□ -1.72
CST9	YLR394W	TDA3	P38758	523 aa		4.28	□□□□□ -1.72
CST9	YLR394W	YNL195C	P40168	261 aa		4.28	□□□□□ -1.72
CST9	YLR394W	HOS4	P40480	1083 aa		4.28	□□□□□ -1.72
CST9	YLR394W	GND2	P53319	492 aa		4.28	□□□□□ -1.72
CST9	YLR394W	YTM1	Q12024	460 aa	Predicted RBP	4.28	□□□□□ -1.72
CST9	YLR394W	HRP1	Q99383	534 aa	Known RBP	4.28	□□□□□ -1.72
CST9	YLR394W	NGG1	P32494	702 aa		4.27	□□□□□ -1.73
CST9	YLR394W	APL2	P36000	726 aa	Predicted RBP	4.27	□□□□□ -1.73
CST9	YLR394W	FAT1	P38225	669 aa		4.27	□□□□□ -1.73
CST9	YLR394W	YHR202W	P38887	602 aa		4.27	□□□□□ -1.73
CST9	YLR394W	ECM1	P39715	212 aa		4.27	□□□□□ -1.73
CST9	YLR394W	MNN11	P46985	422 aa	Known RBP	4.27	□□□□□ -1.73
CST9	YLR394W	SET2	P46995	733 aa	Known RBP	4.27	□□□□□ -1.73
CST9	YLR394W	YGR153W	P48238	217 aa		4.27	□□□□□ -1.73
CST9	YLR394W	HFI1	Q12060	488 aa		4.27	□□□□□ -1.73
CST9	YLR394W	SWI6	P09959	803 aa		4.26	□□□□□ -1.73
CST9	YLR394W	SSB1	P11484	613 aa	Known RBP	4.26	□□□□□ -1.73
CST9	YLR394W	MAL31	P38156	614 aa		4.26	□□□□□ -1.73
CST9	YLR394W	SSB2	P40150	613 aa	Known RBP	4.26	□□□□□ -1.73
CST9	YLR394W	MTL1	P53214	551 aa		4.26	□□□□□ -1.73
CST9	YLR394W	FRE5	Q08908	694 aa		4.26	□□□□□ -1.73
CST9	YLR394W	YPT7	P32939	208 aa		4.25	□□□□□ -1.73
CST9	YLR394W	OAF3	P36023	863 aa		4.25	□□□□□ -1.73
CST9	YLR394W	APN2	P38207	520 aa		4.25	□□□□□ -1.73
CST9	YLR394W	PAF1	P38351	445 aa		4.25	□□□□□ -1.73
CST9	YLR394W	GET2	P40056	285 aa		4.25	□□□□□ -1.73
CST9	YLR394W	GPP2	P40106	250 aa	Known RBP	4.25	□□□□□ -1.73
CST9	YLR394W	ELO3	P40319	345 aa		4.25	□□□□□ -1.73
CST9	YLR394W	YIR042C	P40586	236 aa		4.25	□□□□□ -1.73
CST9	YLR394W	BAP3	P41815	604 aa		4.25	□□□□□ -1.73
CST9	YLR394W	YBP2	P53169	641 aa		4.25	□□□□□ -1.73
CST9	YLR394W	FOL1	P53848	824 aa		4.25	□□□□□ -1.73
CST9	YLR394W	YLR407W	Q06070	228 aa		4.25	□□□□□ -1.73
CST9	YLR394W	MCM21	Q06675	368 aa		4.25	□□□□□ -1.73
CST9	YLR394W	MET3	P08536	511 aa		4.24	□□□□□ -1.73
CST9	YLR394W	PYC1	P11154	1178 aa	Known RBP	4.24	□□□□□ -1.73
CST9	YLR394W	LAT1	P12695	482 aa	Known RBP	4.24	□□□□□ -1.73
CST9	YLR394W	IMG2	P25642	146 aa	Predicted RBP	4.24	□□□□□ -1.73
CST9	YLR394W	YKU70	P32807	602 aa		4.24	□□□□□ -1.73
CST9	YLR394W	SER1	P33330	395 aa	Known RBP	4.24	□□□□□ -1.73
CST9	YLR394W	PPS1	P38148	807 aa		4.24	□□□□□ -1.73
CST9	YLR394W	YBR071W	P38243	211 aa		4.24	□□□□□ -1.73
CST9	YLR394W	SDS3	P40505	327 aa		4.24	□□□□□ -1.73
CST9	YLR394W	COG6	P53959	839 aa		4.24	□□□□□ -1.73
CST9	YLR394W	IOC4	Q04213	475 aa		4.24	□□□□□ -1.73
CST9	YLR394W	DLT1	Q04216	342 aa		4.24	□□□□□ -1.73
CST9	YLR394W	YPS7	Q06325	596 aa		4.24	□□□□□ -1.73
CST9	YLR394W	ISA1	Q07821	250 aa	Predicted RBP	4.24	□□□□□ -1.73
CST9	YLR394W	IRC13	Q08630	104 aa		4.24	□□□□□ -1.73
CST9	YLR394W	CAF20	P12962	161 aa	Known RBP	4.23	□□□□□ -1.73
CST9	YLR394W	SEC65	P29478	273 aa		4.23	□□□□□ -1.73
CST9	YLR394W	NOP9	P47077	666 aa	Known RBP	4.23	□□□□□ -1.73
CST9	YLR394W	RCR2	Q03446	210 aa	Known RBP	4.23	□□□□□ -1.73
CST9	YLR394W	YHM2	Q04013	314 aa		4.23	□□□□□ -1.73
CST9	YLR394W	GAD1	Q04792	585 aa		4.23	□□□□□ -1.73
CST9	YLR394W	ADY4	Q05955	493 aa		4.23	□□□□□ -1.73
CST9	YLR394W	VPS36	Q06696	566 aa		4.23	□□□□□ -1.73
CST9	YLR394W	APM4	Q99186	491 aa		4.23	□□□□□ -1.73
CST9	YLR394W	IME1	P21190	360 aa		4.22	□□□□□ -1.73
CST9	YLR394W	RNR1	P21524	888 aa	Known RBP	4.22	□□□□□ -1.73
CST9	YLR394W	ATP12	P22135	325 aa		4.22	□□□□□ -1.73
CST9	YLR394W	DID4	P36108	232 aa		4.22	□□□□□ -1.73
CST9	YLR394W	DUG1	P43616	481 aa	Known RBP	4.22	□□□□□ -1.73
CST9	YLR394W	NIT2	P47016	307 aa		4.22	□□□□□ -1.73
CST9	YLR394W	GPD1	Q00055	391 aa	Known RBP	4.22	□□□□□ -1.73
CST9	YLR394W	MSL5	Q12186	476 aa	Known RBP RIP-Chip data	4.22	□□□□□ -1.73	not detected
CST9	YLR394W	ECM3	Q99252	613 aa		4.22	□□□□□ -1.73
CST9	YLR394W	CDC26	P14724	124 aa		4.21	□□□□□ -1.73
CST9	YLR394W	TRZ1	P36159	838 aa	Predicted RBP	4.21	□□□□□ -1.73
CST9	YLR394W	BCD1	P38772	366 aa		4.21	□□□□□ -1.73
CST9	YLR394W	FMO1	P38866	432 aa		4.21	□□□□□ -1.73
CST9	YLR394W	HRB1	P38922	454 aa	Known RBP RIP-Chip data	4.21	□□□□□ -1.73	not detected
CST9	YLR394W	YJL163C	P46996	555 aa		4.21	□□□□□ -1.73
CST9	YLR394W	AMA1	P50082	593 aa		4.21	□□□□□ -1.73
CST9	YLR394W	NOP15	P53927	220 aa	Predicted RBP	4.21	□□□□□ -1.73
CST9	YLR394W	REC102	Q02721	264 aa		4.21	□□□□□ -1.73
CST9	YLR394W	STP4	Q07351	490 aa		4.21	□□□□□ -1.73
CST9	YLR394W	HBT1	Q07653	1046 aa	Known RBP	4.21	□□□□□ -1.73
CST9	YLR394W	ATG11	Q12527	1178 aa		4.21	□□□□□ -1.73
CST9	YLR394W	GLN4	P13188	809 aa	Known RBP	4.21	□□□□□ -1.74
CST9	YLR394W	YHL017W	P38745	532 aa		4.21	□□□□□ -1.74
CST9	YLR394W	RSC8	P43609	557 aa	Known RBP	4.21	□□□□□ -1.74
CST9	YLR394W	UBC11	P52492	156 aa		4.21	□□□□□ -1.74
CST9	YLR394W	COX18	P53239	316 aa		4.21	□□□□□ -1.74
CST9	YLR394W	RPS17A	P02407	136 aa	Known RBP	4.2	□□□□□ -1.74
CST9	YLR394W	RPS17B	P14127	136 aa	Known RBP	4.2	□□□□□ -1.74
CST9	YLR394W	FRS1	P15624	595 aa	Known RBP	4.2	□□□□□ -1.74
CST9	YLR394W	MRC1	P25588	1096 aa		4.2	□□□□□ -1.74
CST9	YLR394W	PLC1	P32383	869 aa		4.2	□□□□□ -1.74
CST9	YLR394W	HIR1	P32479	840 aa		4.2	□□□□□ -1.74
CST9	YLR394W	SEC6	P32844	805 aa		4.2	□□□□□ -1.74

Retrieved 100 of 5,963 RNA–protein pairs in 54.4 ms