RNA–Protein interactions for RNA: YLR221C

RSA3, Transcript of Protein with a likely role in ribosomal maturation, yeast

Gene RSA3, Length 663 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RSA3	YLR221C	TRM11	Q12463	433 aa		6.69	□□□□□ -1.34
RSA3	YLR221C	YKU70	P32807	602 aa		6.68	□□□□□ -1.34
RSA3	YLR221C	FAT1	P38225	669 aa		6.68	□□□□□ -1.34
RSA3	YLR221C	PLB1	P39105	664 aa		6.68	□□□□□ -1.34
RSA3	YLR221C	NOP15	P53927	220 aa	Predicted RBP	6.68	□□□□□ -1.34
RSA3	YLR221C	MET14	Q02196	202 aa		6.68	□□□□□ -1.34
RSA3	YLR221C	LEE1	Q02799	301 aa	Known RBP	6.68	□□□□□ -1.34
RSA3	YLR221C	YLR407W	Q06070	228 aa		6.68	□□□□□ -1.34
RSA3	YLR221C	TMA10	Q06177	86 aa		6.68	□□□□□ -1.34
RSA3	YLR221C	MCM21	Q06675	368 aa		6.68	□□□□□ -1.34
RSA3	YLR221C	NOP56	Q12460	504 aa	Known RBP RIP-Chip data	6.68	□□□□□ -1.34	not detected
RSA3	YLR221C	PRP4	P20053	465 aa	Known RBP	6.67	□□□□□ -1.34
RSA3	YLR221C	APL2	P36000	726 aa	Predicted RBP	6.67	□□□□□ -1.34
RSA3	YLR221C	YKL133C	P36066	463 aa		6.67	□□□□□ -1.34
RSA3	YLR221C	GID8	P40208	455 aa		6.67	□□□□□ -1.34
RSA3	YLR221C	TAN1	P53072	289 aa	Predicted RBP	6.67	□□□□□ -1.34
RSA3	YLR221C	ARG5,6	Q01217	863 aa		6.67	□□□□□ -1.34
RSA3	YLR221C	REC102	Q02721	264 aa		6.67	□□□□□ -1.34
RSA3	YLR221C	PWP2	P25635	923 aa	Known RBP	6.66	□□□□□ -1.34
RSA3	YLR221C	SER1	P33330	395 aa	Known RBP	6.66	□□□□□ -1.34
RSA3	YLR221C	LST4	P34239	828 aa		6.66	□□□□□ -1.34
RSA3	YLR221C	RPP1	P38786	293 aa		6.66	□□□□□ -1.34
RSA3	YLR221C	ENP2	P48234	707 aa	Known RBP	6.66	□□□□□ -1.34
RSA3	YLR221C	PIP2	P52960	996 aa		6.66	□□□□□ -1.34
RSA3	YLR221C	HOL1	P53389	586 aa		6.66	□□□□□ -1.34
RSA3	YLR221C	NRG1	Q03125	231 aa		6.66	□□□□□ -1.34
RSA3	YLR221C	PNS1	Q12412	539 aa		6.66	□□□□□ -1.34
RSA3	YLR221C	RPS17A	P02407	136 aa	Known RBP	6.65	□□□□□ -1.34
RSA3	YLR221C	PYC1	P11154	1178 aa	Known RBP	6.65	□□□□□ -1.34
RSA3	YLR221C	RPS17B	P14127	136 aa	Known RBP	6.65	□□□□□ -1.34
RSA3	YLR221C	ADE2	P21264	571 aa	Known RBP	6.65	□□□□□ -1.34
RSA3	YLR221C	IMG2	P25642	146 aa	Predicted RBP	6.65	□□□□□ -1.34
RSA3	YLR221C	PTP2	P29461	750 aa		6.65	□□□□□ -1.34
RSA3	YLR221C	CTF13	P35203	478 aa		6.65	□□□□□ -1.34
RSA3	YLR221C	VPS24	P36095	224 aa	Known RBP	6.65	□□□□□ -1.34
RSA3	YLR221C	MCM6	P53091	1017 aa	Known RBP	6.65	□□□□□ -1.34
RSA3	YLR221C	MLC2	Q06580	163 aa		6.65	□□□□□ -1.34
RSA3	YLR221C	GAL1	P04385	528 aa		6.64	□□□□□ -1.35
RSA3	YLR221C	GLN4	P13188	809 aa	Known RBP	6.64	□□□□□ -1.35
RSA3	YLR221C	CAD1	P24813	409 aa	Known RBP	6.64	□□□□□ -1.35
RSA3	YLR221C	KCC4	P25389	1037 aa		6.64	□□□□□ -1.35
RSA3	YLR221C	KAR4	P25583	335 aa		6.64	□□□□□ -1.35
RSA3	YLR221C	TRM2	P33753	639 aa		6.64	□□□□□ -1.35
RSA3	YLR221C	RIM4	P38741	713 aa		6.64	□□□□□ -1.35
RSA3	YLR221C	PMC1	P38929	1173 aa	Predicted RBP	6.64	□□□□□ -1.35
RSA3	YLR221C	DUN1	P39009	513 aa		6.64	□□□□□ -1.35
RSA3	YLR221C	VID28	P40547	921 aa		6.64	□□□□□ -1.35
RSA3	YLR221C	SLU7	Q02775	382 aa	Known RBP	6.64	□□□□□ -1.35
RSA3	YLR221C	ECM38	Q05902	660 aa	Predicted RBP	6.64	□□□□□ -1.35
RSA3	YLR221C	ISA1	Q07821	250 aa	Predicted RBP	6.64	□□□□□ -1.35
RSA3	YLR221C	ENB1	Q08299	606 aa		6.64	□□□□□ -1.35
RSA3	YLR221C	RRP6	Q12149	733 aa	Known RBP	6.64	□□□□□ -1.35
RSA3	YLR221C	STE11	P23561	717 aa		6.63	□□□□□ -1.35
RSA3	YLR221C	HCM1	P25364	564 aa		6.63	□□□□□ -1.35
RSA3	YLR221C	PET127	P32606	800 aa		6.63	□□□□□ -1.35
RSA3	YLR221C	IES1	P43579	692 aa		6.63	□□□□□ -1.35
RSA3	YLR221C	RSC8	P43609	557 aa	Known RBP	6.63	□□□□□ -1.35
RSA3	YLR221C	MNN10	P50108	393 aa	Known RBP	6.63	□□□□□ -1.35
RSA3	YLR221C	EXG2	P52911	562 aa		6.63	□□□□□ -1.35
RSA3	YLR221C	PAP2	P53632	584 aa	Known RBP	6.63	□□□□□ -1.35
RSA3	YLR221C	UBX4	P54730	416 aa		6.63	□□□□□ -1.35
RSA3	YLR221C	GAD1	Q04792	585 aa		6.63	□□□□□ -1.35
RSA3	YLR221C	VHS3	Q08438	674 aa		6.63	□□□□□ -1.35
RSA3	YLR221C	SRP68	P38687	599 aa	Known RBP	6.62	□□□□□ -1.35
RSA3	YLR221C	CNM67	P53865	581 aa	Known RBP	6.62	□□□□□ -1.35
RSA3	YLR221C	CEF1	Q03654	590 aa	Predicted RBP	6.62	□□□□□ -1.35
RSA3	YLR221C	SGO1	Q08490	590 aa		6.62	□□□□□ -1.35
RSA3	YLR221C	ATP12	P22135	325 aa		6.61	□□□□□ -1.35
RSA3	YLR221C	DPB3	P27344	201 aa		6.61	□□□□□ -1.35
RSA3	YLR221C	DGR2	P32330	852 aa		6.61	□□□□□ -1.35
RSA3	YLR221C	YHR112C	P38716	378 aa		6.61	□□□□□ -1.35
RSA3	YLR221C	COX18	P53239	316 aa		6.61	□□□□□ -1.35
RSA3	YLR221C	HMO1	Q03973	246 aa	Known RBP	6.61	□□□□□ -1.35
RSA3	YLR221C	PUS9	Q12069	462 aa		6.61	□□□□□ -1.35
RSA3	YLR221C	PGI1	P12709	554 aa	Known RBP	6.6	□□□□□ -1.35
RSA3	YLR221C	CDC26	P14724	124 aa		6.6	□□□□□ -1.35
RSA3	YLR221C	FRS1	P15624	595 aa	Known RBP	6.6	□□□□□ -1.35
RSA3	YLR221C	ACO1	P19414	778 aa	Known RBP RIP-Chip data	6.6	□□□□□ -1.35	not detected
RSA3	YLR221C	ATG16	Q03818	150 aa		6.6	□□□□□ -1.35
RSA3	YLR221C	PPN1	Q04119	674 aa		6.6	□□□□□ -1.35
RSA3	YLR221C	YPS7	Q06325	596 aa		6.6	□□□□□ -1.35
RSA3	YLR221C	NGL1	Q08213	363 aa	Known RBP	6.6	□□□□□ -1.35
RSA3	YLR221C	TGL5	Q12043	749 aa		6.6	□□□□□ -1.35
RSA3	YLR221C	ATG11	Q12527	1178 aa		6.6	□□□□□ -1.35
RSA3	YLR221C	ERG20	P08524	352 aa	Known RBP	6.59	□□□□□ -1.35
RSA3	YLR221C	PFK1	P16861	987 aa	Known RBP	6.59	□□□□□ -1.35
RSA3	YLR221C	RRP8	P38961	392 aa	Known RBP	6.59	□□□□□ -1.35
RSA3	YLR221C	MSE1	P48525	536 aa		6.59	□□□□□ -1.35
RSA3	YLR221C	SUB1	P54000	292 aa	Known RBP	6.59	□□□□□ -1.35
RSA3	YLR221C	VBA4	Q04602	768 aa	Known RBP	6.59	□□□□□ -1.35
RSA3	YLR221C	CWC2	Q12046	339 aa	Predicted RBP	6.59	□□□□□ -1.35
RSA3	YLR221C	PIF1	P07271	859 aa		6.58	□□□□□ -1.36
RSA3	YLR221C	RNR1	P21524	888 aa	Known RBP	6.58	□□□□□ -1.36
RSA3	YLR221C	MF(ALPHA)2	P32435	120 aa		6.58	□□□□□ -1.36
RSA3	YLR221C	HXT4	P32467	576 aa		6.58	□□□□□ -1.36
RSA3	YLR221C	TEX1	P53851	422 aa	Known RBP	6.58	□□□□□ -1.36
RSA3	YLR221C	NSE5	Q03718	556 aa		6.58	□□□□□ -1.36
RSA3	YLR221C	CTK1	Q03957	528 aa	Known RBP	6.58	□□□□□ -1.36
RSA3	YLR221C	STP4	Q07351	490 aa		6.58	□□□□□ -1.36
RSA3	YLR221C	NTO1	Q12311	748 aa		6.58	□□□□□ -1.36

Retrieved 100 of 5,963 RNA–protein pairs in 65 ms