RNA–Protein interactions for RNA: YLL049W

LDB18, Transcript of Component of the dynactin complex, yeastyeast

Gene LDB18, Length 540 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
LDB18YLL049W TDA7P53882 636 aaPredicted RBP5.76□□□□□ -1.49
LDB18YLL049W TBF1Q02457 562 aa5.76□□□□□ -1.49
LDB18YLL049W TIF35Q04067 274 aaKnown RBP5.76□□□□□ -1.49
LDB18YLL049W YLH47Q06493 454 aa5.76□□□□□ -1.49
LDB18YLL049W YEL076C-AP0CX16 216 aa5.75□□□□□ -1.49
LDB18YLL049W YLR464WP0CX17 216 aa5.75□□□□□ -1.49
LDB18YLL049W RPC53P25441 422 aa5.75□□□□□ -1.49
LDB18YLL049W NUD1P32336 851 aa5.75□□□□□ -1.49
LDB18YLL049W YSC83P32792 385 aa5.75□□□□□ -1.49
LDB18YLL049W PIK1P39104 1066 aa5.75□□□□□ -1.49
LDB18YLL049W YEL076CP39971 216 aa5.75□□□□□ -1.49
LDB18YLL049W AIM9P40053 627 aaKnown RBP5.75□□□□□ -1.49
LDB18YLL049W OSW5P40219 148 aa5.75□□□□□ -1.49
LDB18YLL049W NUP82P40368 713 aa5.75□□□□□ -1.49
LDB18YLL049W YIL161WP40449 235 aaKnown RBP5.75□□□□□ -1.49
LDB18YLL049W YGR153WP48238 217 aa5.75□□□□□ -1.49
LDB18YLL049W ASN1P49089 572 aaKnown RBP5.75□□□□□ -1.49
LDB18YLL049W CUE3P53137 624 aaKnown RBP5.75□□□□□ -1.49
LDB18YLL049W NOP13P53883 403 aaKnown RBP RIP-Chip data5.75□□□□□ -1.49not detected
LDB18YLL049W CEG1Q01159 459 aaPredicted RBP5.75□□□□□ -1.49
LDB18YLL049W SEG1Q04279 960 aa5.75□□□□□ -1.49
LDB18YLL049W ERF2Q06551 359 aa5.75□□□□□ -1.49
LDB18YLL049W ASP3-2P0CX77 362 aa5.74□□□□□ -1.49
LDB18YLL049W ASP3-3P0CX78 362 aa5.74□□□□□ -1.49
LDB18YLL049W ASP3-4P0CX79 362 aa5.74□□□□□ -1.49
LDB18YLL049W ASP3-1P0CZ17 362 aa5.74□□□□□ -1.49
LDB18YLL049W SSB1P11484 613 aaKnown RBP5.74□□□□□ -1.49
LDB18YLL049W TAF13P11747 167 aa5.74□□□□□ -1.49
LDB18YLL049W SRX1P36077 127 aa5.74□□□□□ -1.49
LDB18YLL049W NUP60P39705 539 aa5.74□□□□□ -1.49
LDB18YLL049W SSB2P40150 613 aaKnown RBP5.74□□□□□ -1.49
LDB18YLL049W SPO22P40511 975 aa5.74□□□□□ -1.49
LDB18YLL049W ERG10P41338 398 aaKnown RBP5.74□□□□□ -1.49
LDB18YLL049W SCD6P45978 349 aaKnown RBP RIP-Chip data5.74□□□□□ -1.49 RIP-Chip
LDB18YLL049W HXT17P53631 564 aa5.74□□□□□ -1.49
LDB18YLL049W CBK1P53894 756 aa5.74□□□□□ -1.49
LDB18YLL049W YBL113CQ7M4S9 792 aa5.74□□□□□ -1.49
LDB18YLL049W FRS2P15625 503 aaKnown RBP5.73□□□□□ -1.49
LDB18YLL049W CBP3P21560 335 aa5.73□□□□□ -1.49
LDB18YLL049W SSD1P24276 1250 aaKnown RBP RIP-Chip data5.73□□□□□ -1.49not detected
LDB18YLL049W ASF1P32447 279 aa5.73□□□□□ -1.49
LDB18YLL049W TKL2P33315 681 aa5.73□□□□□ -1.49
LDB18YLL049W BRN1P38170 754 aa5.73□□□□□ -1.49
LDB18YLL049W BAT1P38891 393 aaKnown RBP5.73□□□□□ -1.49
LDB18YLL049W UME6P39001 836 aa5.73□□□□□ -1.49
LDB18YLL049W GDH3P39708 457 aa5.73□□□□□ -1.49
LDB18YLL049W NAM8Q00539 523 aaKnown RBP5.73□□□□□ -1.49
LDB18YLL049W SMA1Q02651 245 aa5.73□□□□□ -1.49
LDB18YLL049W GCN5Q03330 439 aa5.73□□□□□ -1.49
LDB18YLL049W WAR1Q03631 944 aa5.73□□□□□ -1.49
LDB18YLL049W CUR1Q06469 252 aa5.73□□□□□ -1.49
LDB18YLL049W GPM2Q12008 311 aa5.73□□□□□ -1.49
LDB18YLL049W SGT2Q12118 346 aaKnown RBP5.73□□□□□ -1.49
LDB18YLL049W MSF1P08425 469 aa5.72□□□□□ -1.49
LDB18YLL049W MATALPHA2P0CY08 210 aa5.72□□□□□ -1.49
LDB18YLL049W HMLALPHA2P0CY09 210 aa5.72□□□□□ -1.49
LDB18YLL049W PFK1P16861 987 aaKnown RBP5.72□□□□□ -1.49
LDB18YLL049W CCR4P31384 837 aaKnown RBP5.72□□□□□ -1.49
LDB18YLL049W AGP2P38090 596 aa5.72□□□□□ -1.49
LDB18YLL049W PPE1P38796 400 aa5.72□□□□□ -1.49
LDB18YLL049W SDA1P53313 767 aaKnown RBP5.72□□□□□ -1.49
LDB18YLL049W YNL011CP53980 444 aa5.72□□□□□ -1.49
LDB18YLL049W PRM6Q04705 352 aa5.72□□□□□ -1.49
LDB18YLL049W ADY4Q05955 493 aa5.72□□□□□ -1.49
LDB18YLL049W TAF10Q12030 206 aa5.72□□□□□ -1.49
LDB18YLL049W TIP41Q12199 356 aa5.72□□□□□ -1.49
LDB18YLL049W TRA1P38811 3744 aa5.72□□□□□ -1.49
LDB18YLL049W TUF1P02992 437 aaKnown RBP5.71□□□□□ -1.5
LDB18YLL049W CKA2P19454 339 aa5.71□□□□□ -1.5
LDB18YLL049W PRS1P32895 427 aaKnown RBP5.71□□□□□ -1.5
LDB18YLL049W ATG12P38316 186 aa5.71□□□□□ -1.5
LDB18YLL049W YBR225WP38321 900 aa5.71□□□□□ -1.5
LDB18YLL049W PPX1P38698 397 aa5.71□□□□□ -1.5
LDB18YLL049W ERP5P38819 212 aa5.71□□□□□ -1.5
LDB18YLL049W HXT13P39924 564 aa5.71□□□□□ -1.5
LDB18YLL049W HEM14P40012 539 aa5.71□□□□□ -1.5
LDB18YLL049W YPS6P40583 537 aa5.71□□□□□ -1.5
LDB18YLL049W DUG1P43616 481 aaKnown RBP5.71□□□□□ -1.5
LDB18YLL049W YGL036WP53185 909 aaPredicted RBP5.71□□□□□ -1.5
LDB18YLL049W YGR266WP53326 701 aa5.71□□□□□ -1.5
LDB18YLL049W TOF2Q02208 771 aa5.71□□□□□ -1.5
LDB18YLL049W YPL014WQ02606 381 aa5.71□□□□□ -1.5
LDB18YLL049W YLR407WQ06070 228 aa5.71□□□□□ -1.5
LDB18YLL049W YCG1Q06680 1035 aa5.71□□□□□ -1.5
LDB18YLL049W RTK1Q12100 620 aaPredicted RBP5.71□□□□□ -1.5
LDB18YLL049W HFA1P32874 2273 aa5.71□□□□□ -1.5
LDB18YLL049W UTP20P35194 2493 aaKnown RBP5.7□□□□□ -1.5
LDB18YLL049W YBR056W-AI2HB52 66 aa5.7□□□□□ -1.5
LDB18YLL049W RML2P32611 393 aa5.7□□□□□ -1.5
LDB18YLL049W TBS1P38114 1094 aa5.7□□□□□ -1.5
LDB18YLL049W UBP13P38187 747 aa5.7□□□□□ -1.5
LDB18YLL049W SHE3P38272 425 aaKnown RBP5.7□□□□□ -1.5
LDB18YLL049W ATG3P40344 310 aa5.7□□□□□ -1.5
LDB18YLL049W SUM1P46676 1062 aa5.7□□□□□ -1.5
LDB18YLL049W YKE2P52553 114 aa5.7□□□□□ -1.5
LDB18YLL049W GUP1P53154 560 aa5.7□□□□□ -1.5
LDB18YLL049W YNR065CP53751 1116 aa5.7□□□□□ -1.5
LDB18YLL049W TOF1P53840 1238 aa5.7□□□□□ -1.5
LDB18YLL049W UTP14Q04500 899 aaKnown RBP5.7□□□□□ -1.5
LDB18YLL049W ECM22Q05958 814 aaPredicted RBP5.7□□□□□ -1.5
Retrieved 100 of 5,963 RNA–protein pairs in 30.6 ms