RNA–Protein interactions for RNA: YKL184W

SPE1, Transcript of Ornithine decarboxylase, yeast

Gene SPE1, Length 1,401 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SPE1	YKL184W	PEX1	P24004	1043 aa		3.5	□□□□□ -1.85
SPE1	YKL184W	CCR4	P31384	837 aa	Known RBP	3.5	□□□□□ -1.85
SPE1	YKL184W	PPZ2	P33329	710 aa		3.5	□□□□□ -1.85
SPE1	YKL184W	YPT53	P36019	220 aa		3.5	□□□□□ -1.85
SPE1	YKL184W	CUE2	P36075	443 aa	Known RBP	3.5	□□□□□ -1.85
SPE1	YKL184W	RRP14	P36080	434 aa	Known RBP	3.5	□□□□□ -1.85
SPE1	YKL184W	CRP1	P38845	465 aa	Known RBP	3.5	□□□□□ -1.85
SPE1	YKL184W	SET2	P46995	733 aa	Known RBP	3.5	□□□□□ -1.85
SPE1	YKL184W	AIM14	P53109	570 aa		3.5	□□□□□ -1.85
SPE1	YKL184W	HRP1	Q99383	534 aa	Known RBP	3.5	□□□□□ -1.85
SPE1	YKL184W	ABF1	P14164	731 aa		3.49	□□□□□ -1.85
SPE1	YKL184W	MNN4	P36044	1178 aa		3.49	□□□□□ -1.85
SPE1	YKL184W	PCM1	P38628	557 aa	Known RBP	3.49	□□□□□ -1.85
SPE1	YKL184W	LYS9	P38999	446 aa		3.49	□□□□□ -1.85
SPE1	YKL184W	RNH70	P53331	553 aa		3.49	□□□□□ -1.85
SPE1	YKL184W	ATG4	P53867	494 aa		3.49	□□□□□ -1.85
SPE1	YKL184W	TFB2	Q02939	513 aa		3.49	□□□□□ -1.85
SPE1	YKL184W	GUD1	Q07729	489 aa		3.49	□□□□□ -1.85
SPE1	YKL184W	RPN13	O13563	156 aa		3.48	□□□□□ -1.85
SPE1	YKL184W	SPO11	P23179	398 aa		3.48	□□□□□ -1.85
SPE1	YKL184W	MIH1	P23748	554 aa		3.48	□□□□□ -1.85
SPE1	YKL184W	ERG6	P25087	383 aa	Known RBP	3.48	□□□□□ -1.85
SPE1	YKL184W	ILV6	P25605	309 aa	Known RBP	3.48	□□□□□ -1.85
SPE1	YKL184W	PHO11	P35842	467 aa		3.48	□□□□□ -1.85
SPE1	YKL184W	MAL31	P38156	614 aa		3.48	□□□□□ -1.85
SPE1	YKL184W	PHO12	P38693	467 aa		3.48	□□□□□ -1.85
SPE1	YKL184W	ATF1	P40353	525 aa		3.48	□□□□□ -1.85
SPE1	YKL184W	TAH11	P47112	604 aa		3.48	□□□□□ -1.85
SPE1	YKL184W	YNL193W	P53870	558 aa		3.48	□□□□□ -1.85
SPE1	YKL184W	UTP14	Q04500	899 aa	Known RBP	3.48	□□□□□ -1.85
SPE1	YKL184W	ISA1	Q07821	250 aa	Predicted RBP	3.48	□□□□□ -1.85
SPE1	YKL184W	HMG1	P12683	1054 aa		3.47	□□□□□ -1.85
SPE1	YKL184W	SSZ1	P38788	538 aa	Known RBP	3.47	□□□□□ -1.85
SPE1	YKL184W	YHR202W	P38887	602 aa		3.47	□□□□□ -1.85
SPE1	YKL184W	BDH2	P39713	417 aa		3.47	□□□□□ -1.85
SPE1	YKL184W	PIG2	P40187	538 aa		3.47	□□□□□ -1.85
SPE1	YKL184W	GID8	P40208	455 aa		3.47	□□□□□ -1.85
SPE1	YKL184W	NOP9	P47077	666 aa	Known RBP	3.47	□□□□□ -1.85
SPE1	YKL184W	SDA1	P53313	767 aa	Known RBP	3.47	□□□□□ -1.85
SPE1	YKL184W	APM1	Q00776	475 aa	Predicted RBP	3.47	□□□□□ -1.85
SPE1	YKL184W	LGE1	Q02796	332 aa	Known RBP	3.47	□□□□□ -1.85
SPE1	YKL184W	HMO1	Q03973	246 aa	Known RBP	3.47	□□□□□ -1.85
SPE1	YKL184W	ERG20	P08524	352 aa	Known RBP	3.46	□□□□□ -1.86
SPE1	YKL184W	PRP28	P23394	588 aa		3.46	□□□□□ -1.86
SPE1	YKL184W	HRB1	P38922	454 aa	Known RBP RIP-Chip data	3.46	□□□□□ -1.86	not detected
SPE1	YKL184W	GET2	P40056	285 aa		3.46	□□□□□ -1.86
SPE1	YKL184W	RSC8	P43609	557 aa	Known RBP	3.46	□□□□□ -1.86
SPE1	YKL184W	MET13	P53128	600 aa		3.46	□□□□□ -1.86
SPE1	YKL184W	FHN1	P53279	174 aa		3.46	□□□□□ -1.86
SPE1	YKL184W	ALG12	P53730	551 aa		3.46	□□□□□ -1.86
SPE1	YKL184W	ARP4	P80428	489 aa		3.46	□□□□□ -1.86
SPE1	YKL184W	USV1	Q12132	391 aa		3.46	□□□□□ -1.86
SPE1	YKL184W	TAF3	Q12297	353 aa		3.46	□□□□□ -1.86
SPE1	YKL184W	NDJ1	Q12366	352 aa		3.46	□□□□□ -1.86
SPE1	YKL184W	NOP14	Q99207	810 aa	Known RBP	3.46	□□□□□ -1.86
SPE1	YKL184W	ECM3	Q99252	613 aa		3.46	□□□□□ -1.86
SPE1	YKL184W	TUB1	P09733	447 aa	Known RBP	3.45	□□□□□ -1.86
SPE1	YKL184W	NTH1	P32356	751 aa		3.45	□□□□□ -1.86
SPE1	YKL184W	YJR039W	P47107	1121 aa		3.45	□□□□□ -1.86
SPE1	YKL184W	BRE5	P53741	515 aa	Known RBP	3.45	□□□□□ -1.86
SPE1	YKL184W	VHS3	Q08438	674 aa		3.45	□□□□□ -1.86
SPE1	YKL184W	MLH3	Q12083	715 aa		3.45	□□□□□ -1.86
SPE1	YKL184W	KCC4	P25389	1037 aa		3.44	□□□□□ -1.86
SPE1	YKL184W	BCS1	P32839	456 aa		3.44	□□□□□ -1.86
SPE1	YKL184W	GMH1	P36125	273 aa		3.44	□□□□□ -1.86
SPE1	YKL184W	AKL1	P38080	1108 aa	Known RBP	3.44	□□□□□ -1.86
SPE1	YKL184W	BIT2	P38346	545 aa		3.44	□□□□□ -1.86
SPE1	YKL184W	TDA3	P38758	523 aa		3.44	□□□□□ -1.86
SPE1	YKL184W	NMD2	P38798	1089 aa	Known RBP	3.44	□□□□□ -1.86
SPE1	YKL184W	RIX1	P38883	763 aa	Predicted RBP	3.44	□□□□□ -1.86
SPE1	YKL184W	MNN1	P39106	762 aa		3.44	□□□□□ -1.86
SPE1	YKL184W	YNL195C	P40168	261 aa		3.44	□□□□□ -1.86
SPE1	YKL184W	HLJ1	P48353	224 aa		3.44	□□□□□ -1.86
SPE1	YKL184W	SPC98	P53540	846 aa		3.44	□□□□□ -1.86
SPE1	YKL184W	LEE1	Q02799	301 aa	Known RBP	3.44	□□□□□ -1.86
SPE1	YKL184W	YMR210W	Q03649	449 aa		3.44	□□□□□ -1.86
SPE1	YKL184W	THI22	Q06490	572 aa		3.44	□□□□□ -1.86
SPE1	YKL184W	SUT2	Q12286	268 aa		3.44	□□□□□ -1.86
SPE1	YKL184W	POM34	Q12445	299 aa		3.44	□□□□□ -1.86
SPE1	YKL184W	RPS9B	P05755	195 aa	Known RBP	3.44	□□□□□ -1.86
SPE1	YKL184W	RPL8A	P17076	256 aa	Known RBP	3.44	□□□□□ -1.86
SPE1	YKL184W	THR1	P17423	357 aa	Known RBP	3.44	□□□□□ -1.86
SPE1	YKL184W	KIN82	P25341	720 aa		3.44	□□□□□ -1.86
SPE1	YKL184W	FUB1	P25659	250 aa		3.44	□□□□□ -1.86
SPE1	YKL184W	PEX2	P32800	271 aa		3.44	□□□□□ -1.86
SPE1	YKL184W	CCT7	P42943	550 aa	Known RBP	3.44	□□□□□ -1.86
SPE1	YKL184W	YGR151C	P53287	111 aa		3.44	□□□□□ -1.86
SPE1	YKL184W	VBA4	Q04602	768 aa	Known RBP	3.44	□□□□□ -1.86
SPE1	YKL184W	YLR001C	Q07895	862 aa		3.44	□□□□□ -1.86
SPE1	YKL184W	CHS5	Q12114	671 aa	Known RBP	3.44	□□□□□ -1.86
SPE1	YKL184W	PRP22	P24384	1145 aa	Known RBP	3.43	□□□□□ -1.86
SPE1	YKL184W	ADY2	P25613	283 aa		3.43	□□□□□ -1.86
SPE1	YKL184W	PET127	P32606	800 aa		3.43	□□□□□ -1.86
SPE1	YKL184W	APL3	P38065	1025 aa		3.43	□□□□□ -1.86
SPE1	YKL184W	YEL020C	P39994	560 aa		3.43	□□□□□ -1.86
SPE1	YKL184W	MGS1	P40151	587 aa		3.43	□□□□□ -1.86
SPE1	YKL184W	YDL086W	Q07505	273 aa		3.43	□□□□□ -1.86
SPE1	YKL184W	DCS2	Q12123	353 aa		3.43	□□□□□ -1.86
SPE1	YKL184W	ADR1	P07248	1323 aa		3.42	□□□□□ -1.86
SPE1	YKL184W	FRS1	P15624	595 aa	Known RBP	3.42	□□□□□ -1.86

Retrieved 100 of 5,963 RNA–protein pairs in 82.5 ms