RNA–Protein interactions for RNA: YGR171C

MSM1, Transcript of Mitochondrial methionyl-tRNA synthetase (MetRS), yeastyeast

Gene MSM1, Length 1,728 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
MSM1YGR171C RIM4P38741 713 aa4.19□□□□□ -1.74
MSM1YGR171C BRE5P53741 515 aaKnown RBP4.19□□□□□ -1.74
MSM1YGR171C TMA10Q06177 86 aa4.19□□□□□ -1.74
MSM1YGR171C YPR027CQ12079 277 aa4.19□□□□□ -1.74
MSM1YGR171C RPS21BQ3E754 87 aaKnown RBP4.19□□□□□ -1.74
MSM1YGR171C SEC65P29478 273 aa4.18□□□□□ -1.74
MSM1YGR171C SIC1P38634 284 aa4.18□□□□□ -1.74
MSM1YGR171C YHR202WP38887 602 aa4.18□□□□□ -1.74
MSM1YGR171C SET2P46995 733 aaKnown RBP4.18□□□□□ -1.74
MSM1YGR171C EXG2P52911 562 aa4.18□□□□□ -1.74
MSM1YGR171C LEE1Q02799 301 aaKnown RBP4.18□□□□□ -1.74
MSM1YGR171C MLC2Q06580 163 aa4.18□□□□□ -1.74
MSM1YGR171C APM4Q99186 491 aa4.18□□□□□ -1.74
MSM1YGR171C STE11P23561 717 aa4.18□□□□□ -1.74
MSM1YGR171C ELM1P32801 640 aa4.18□□□□□ -1.74
MSM1YGR171C YKU70P32807 602 aa4.18□□□□□ -1.74
MSM1YGR171C CTF13P35203 478 aa4.18□□□□□ -1.74
MSM1YGR171C OAF3P36023 863 aa4.18□□□□□ -1.74
MSM1YGR171C APT2P36973 181 aa4.18□□□□□ -1.74
MSM1YGR171C AKL1P38080 1108 aaKnown RBP4.18□□□□□ -1.74
MSM1YGR171C APN2P38207 520 aa4.18□□□□□ -1.74
MSM1YGR171C IES5P40060 125 aa4.18□□□□□ -1.74
MSM1YGR171C RSC8P43609 557 aaKnown RBP4.18□□□□□ -1.74
MSM1YGR171C TAN1P53072 289 aaPredicted RBP4.18□□□□□ -1.74
MSM1YGR171C MCM6P53091 1017 aaKnown RBP4.18□□□□□ -1.74
MSM1YGR171C PEX15Q08215 383 aa4.18□□□□□ -1.74
MSM1YGR171C ENB1Q08299 606 aa4.18□□□□□ -1.74
MSM1YGR171C HIS6P40545 261 aa4.17□□□□□ -1.74
MSM1YGR171C MNN10P50108 393 aaKnown RBP4.17□□□□□ -1.74
MSM1YGR171C ARG5,6Q01217 863 aa4.17□□□□□ -1.74
MSM1YGR171C NRG1Q03125 231 aa4.17□□□□□ -1.74
MSM1YGR171C YDL121CQ07541 149 aa4.17□□□□□ -1.74
MSM1YGR171C SWI6P09959 803 aa4.16□□□□□ -1.74
MSM1YGR171C PFK1P16861 987 aaKnown RBP4.16□□□□□ -1.74
MSM1YGR171C HCA4P20448 770 aaKnown RBP4.16□□□□□ -1.74
MSM1YGR171C ADE2P21264 571 aaKnown RBP4.16□□□□□ -1.74
MSM1YGR171C SER1P33330 395 aaKnown RBP4.16□□□□□ -1.74
MSM1YGR171C PTH2P34222 208 aa4.16□□□□□ -1.74
MSM1YGR171C THI80P35202 319 aa4.16□□□□□ -1.74
MSM1YGR171C APL2P36000 726 aaPredicted RBP4.16□□□□□ -1.74
MSM1YGR171C BEM4P39011 633 aa4.16□□□□□ -1.74
MSM1YGR171C ECM1P39715 212 aa4.16□□□□□ -1.74
MSM1YGR171C RNR4P49723 345 aaKnown RBP4.16□□□□□ -1.74
MSM1YGR171C PAP2P53632 584 aaKnown RBP4.16□□□□□ -1.74
MSM1YGR171C REC102Q02721 264 aa4.16□□□□□ -1.74
MSM1YGR171C YMR210WQ03649 449 aa4.16□□□□□ -1.74
MSM1YGR171C YLR407WQ06070 228 aa4.16□□□□□ -1.74
MSM1YGR171C FAT1P38225 669 aa4.15□□□□□ -1.74
MSM1YGR171C RRP8P38961 392 aaKnown RBP4.15□□□□□ -1.74
MSM1YGR171C GID8P40208 455 aa4.15□□□□□ -1.74
MSM1YGR171C MRPS35P53292 345 aa4.15□□□□□ -1.74
MSM1YGR171C ECM38Q05902 660 aaPredicted RBP4.15□□□□□ -1.74
MSM1YGR171C MCM21Q06675 368 aa4.15□□□□□ -1.74
MSM1YGR171C ISA1Q07821 250 aaPredicted RBP4.15□□□□□ -1.74
MSM1YGR171C MRS6P32864 603 aaKnown RBP4.15□□□□□ -1.75
MSM1YGR171C YHR112CP38716 378 aa4.15□□□□□ -1.75
MSM1YGR171C YHL041WP38730 149 aa4.15□□□□□ -1.75
MSM1YGR171C MPT5P39016 859 aaKnown RBP RIP-Chip data4.15□□□□□ -1.75not detected
MSM1YGR171C NOP15P53927 220 aaPredicted RBP4.15□□□□□ -1.75
MSM1YGR171C TMA64Q04600 565 aaKnown RBP4.15□□□□□ -1.75
MSM1YGR171C GAD1Q04792 585 aa4.15□□□□□ -1.75
MSM1YGR171C NOP56Q12460 504 aaKnown RBP RIP-Chip data4.15□□□□□ -1.75not detected
MSM1YGR171C PYC1P11154 1178 aaKnown RBP4.14□□□□□ -1.75
MSM1YGR171C GLN4P13188 809 aaKnown RBP4.14□□□□□ -1.75
MSM1YGR171C IMG2P25642 146 aaPredicted RBP4.14□□□□□ -1.75
MSM1YGR171C DCG1P32460 244 aa4.14□□□□□ -1.75
MSM1YGR171C YKL222CP35995 705 aa4.14□□□□□ -1.75
MSM1YGR171C FKH2P41813 862 aa4.14□□□□□ -1.75
MSM1YGR171C NRD1P53617 575 aaKnown RBP RIP-Chip data4.14□□□□□ -1.75not detected
MSM1YGR171C CLU1Q03690 1277 aaKnown RBP4.14□□□□□ -1.75
MSM1YGR171C VHS3Q08438 674 aa4.14□□□□□ -1.75
MSM1YGR171C TGL5Q12043 749 aa4.14□□□□□ -1.75
MSM1YGR171C LAS17Q12446 633 aa4.14□□□□□ -1.75
MSM1YGR171C TRP4P07285 380 aaPredicted RBP4.13□□□□□ -1.75
MSM1YGR171C KTR4P38131 464 aa4.13□□□□□ -1.75
MSM1YGR171C COX18P53239 316 aa4.13□□□□□ -1.75
MSM1YGR171C HOL1P53389 586 aa4.13□□□□□ -1.75
MSM1YGR171C TEX1P53851 422 aaKnown RBP4.13□□□□□ -1.75
MSM1YGR171C CNM67P53865 581 aaKnown RBP4.13□□□□□ -1.75
MSM1YGR171C SGO1Q08490 590 aa4.13□□□□□ -1.75
MSM1YGR171C NKP1Q12493 238 aa4.13□□□□□ -1.75
MSM1YGR171C RPS17AP02407 136 aaKnown RBP4.12□□□□□ -1.75
MSM1YGR171C MET3P08536 511 aa4.12□□□□□ -1.75
MSM1YGR171C RPS17BP14127 136 aaKnown RBP4.12□□□□□ -1.75
MSM1YGR171C ATP12P22135 325 aa4.12□□□□□ -1.75
MSM1YGR171C MFT1P33441 392 aaKnown RBP4.12□□□□□ -1.75
MSM1YGR171C DUN1P39009 513 aa4.12□□□□□ -1.75
MSM1YGR171C AMA1P50082 593 aa4.12□□□□□ -1.75
MSM1YGR171C ERG5P54781 538 aa4.12□□□□□ -1.75
MSM1YGR171C CTK1Q03957 528 aaKnown RBP4.12□□□□□ -1.75
MSM1YGR171C DLT1Q04216 342 aa4.12□□□□□ -1.75
MSM1YGR171C PSR2Q07949 397 aa4.12□□□□□ -1.75
MSM1YGR171C ATG11Q12527 1178 aa4.12□□□□□ -1.75
MSM1YGR171C FRS1P15624 595 aaKnown RBP4.12□□□□□ -1.75
MSM1YGR171C RNR1P21524 888 aaKnown RBP4.12□□□□□ -1.75
MSM1YGR171C PET127P32606 800 aa4.12□□□□□ -1.75
MSM1YGR171C VID28P40547 921 aa4.12□□□□□ -1.75
MSM1YGR171C HMO1Q03973 246 aaKnown RBP4.12□□□□□ -1.75
MSM1YGR171C YPS7Q06325 596 aa4.12□□□□□ -1.75
MSM1YGR171C ERG20P08524 352 aaKnown RBP4.11□□□□□ -1.75
Retrieved 100 of 5,963 RNA–protein pairs in 9.9 ms