RNA–Protein interactions for RNA: YGR141W

VPS62, Transcript of Vacuolar protein sorting (VPS) protein, yeastyeast

Gene VPS62, Length 1,404 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS62YGR141W PRP16P15938 1071 aaPredicted RBP9.49□□□□□ -0.89
VPS62YGR141W KIP2P28743 706 aa9.49□□□□□ -0.89
VPS62YGR141W SEG2P34250 1132 aa9.49□□□□□ -0.89
VPS62YGR141W PCM1P38628 557 aaKnown RBP9.49□□□□□ -0.89
VPS62YGR141W RPS7BP48164 190 aaKnown RBP9.49□□□□□ -0.89
VPS62YGR141W TRS130Q03660 1102 aa9.49□□□□□ -0.89
VPS62YGR141W FAR8Q05040 523 aa9.49□□□□□ -0.89
VPS62YGR141W ABP140Q08641 628 aaKnown RBP9.49□□□□□ -0.89
VPS62YGR141W JIP3O13555 125 aa9.48□□□□□ -0.89
VPS62YGR141W BI2P03873 423 aa9.48□□□□□ -0.89
VPS62YGR141W BI4P03879 638 aa9.48□□□□□ -0.89
VPS62YGR141W GCR1P07261 785 aa9.48□□□□□ -0.89
VPS62YGR141W SRV2P17555 526 aaKnown RBP9.48□□□□□ -0.89
VPS62YGR141W YMC2P38087 329 aa9.48□□□□□ -0.89
VPS62YGR141W PBP2P38151 413 aaKnown RBP RIP-Chip data9.48□□□□□ -0.89not detected
VPS62YGR141W VID24P38263 362 aa9.48□□□□□ -0.89
VPS62YGR141W NAB3P38996 802 aaKnown RBP RIP-Chip data9.48□□□□□ -0.89not detected
VPS62YGR141W MRX1P40050 688 aa9.48□□□□□ -0.89
VPS62YGR141W HLJ1P48353 224 aa9.48□□□□□ -0.89
VPS62YGR141W PUS2P53167 370 aa9.48□□□□□ -0.89
VPS62YGR141W NOG2P53742 486 aaKnown RBP9.48□□□□□ -0.89
VPS62YGR141W YMR027WQ04371 470 aa9.48□□□□□ -0.89
VPS62YGR141W YMR321CQ04898 105 aa9.48□□□□□ -0.89
VPS62YGR141W PUS5Q06244 254 aa9.48□□□□□ -0.89
VPS62YGR141W SDH5Q08230 162 aa9.48□□□□□ -0.89
VPS62YGR141W YPL225WQ08971 146 aaKnown RBP9.48□□□□□ -0.89
VPS62YGR141W BI3Q9ZZW7 517 aa9.48□□□□□ -0.89
VPS62YGR141W EST1P17214 699 aaPredicted RBP9.48□□□□□ -0.89
VPS62YGR141W RRT12P25381 491 aa9.48□□□□□ -0.89
VPS62YGR141W NIP1P32497 812 aaKnown RBP9.48□□□□□ -0.89
VPS62YGR141W TMT1P32643 299 aa9.48□□□□□ -0.89
VPS62YGR141W RGT1P32862 1170 aa9.48□□□□□ -0.89
VPS62YGR141W TMN3P40071 706 aa9.48□□□□□ -0.89
VPS62YGR141W RGD2P43556 714 aa9.48□□□□□ -0.89
VPS62YGR141W ACF4P47129 309 aa9.48□□□□□ -0.89
VPS62YGR141W YNL247WP53852 767 aaKnown RBP9.48□□□□□ -0.89
VPS62YGR141W YDR278CQ05612 105 aa9.48□□□□□ -0.89
VPS62YGR141W ACM1Q08981 209 aa9.48□□□□□ -0.89
VPS62YGR141W KAR3P17119 729 aa9.47□□□□□ -0.89
VPS62YGR141W AEP2P22136 580 aa9.47□□□□□ -0.89
VPS62YGR141W PUF4P25339 888 aaKnown RBP RIP-Chip data9.47□□□□□ -0.89not detected
VPS62YGR141W APM2P38700 605 aa9.47□□□□□ -0.89
VPS62YGR141W ARG2P40360 574 aa9.47□□□□□ -0.89
VPS62YGR141W YIL089WP40500 205 aa9.47□□□□□ -0.89
VPS62YGR141W COG6P53959 839 aa9.47□□□□□ -0.89
VPS62YGR141W SHS1Q07657 551 aa9.47□□□□□ -0.89
VPS62YGR141W VHS3Q08438 674 aa9.47□□□□□ -0.89
VPS62YGR141W CIR2Q08822 631 aa9.47□□□□□ -0.89
VPS62YGR141W GAL10P04397 699 aa9.46□□□□□ -0.9
VPS62YGR141W ASP3-2P0CX77 362 aa9.46□□□□□ -0.9
VPS62YGR141W ASP3-3P0CX78 362 aa9.46□□□□□ -0.9
VPS62YGR141W ASP3-4P0CX79 362 aa9.46□□□□□ -0.9
VPS62YGR141W ASP3-1P0CZ17 362 aa9.46□□□□□ -0.9
VPS62YGR141W HEM15P16622 393 aa9.46□□□□□ -0.9
VPS62YGR141W GYP6P32806 458 aa9.46□□□□□ -0.9
VPS62YGR141W SMY2P32909 740 aaKnown RBP9.46□□□□□ -0.9
VPS62YGR141W NOP4P37838 685 aaKnown RBP9.46□□□□□ -0.9
VPS62YGR141W DSF2P38213 736 aa9.46□□□□□ -0.9
VPS62YGR141W BSD2P38356 321 aa9.46□□□□□ -0.9
VPS62YGR141W ECM1P39715 212 aa9.46□□□□□ -0.9
VPS62YGR141W SAH1P39954 449 aaKnown RBP9.46□□□□□ -0.9
VPS62YGR141W TMA108P40462 946 aa9.46□□□□□ -0.9
VPS62YGR141W SNZ3P43545 298 aa9.46□□□□□ -0.9
VPS62YGR141W MNP1P53163 194 aaPredicted RBP9.46□□□□□ -0.9
VPS62YGR141W SNZ2P53824 298 aa9.46□□□□□ -0.9
VPS62YGR141W YNL108CP53929 270 aa9.46□□□□□ -0.9
VPS62YGR141W PRM6Q04705 352 aa9.46□□□□□ -0.9
VPS62YGR141W YDR018CQ12185 396 aa9.46□□□□□ -0.9
VPS62YGR141W ILV2P07342 687 aaKnown RBP9.45□□□□□ -0.9
VPS62YGR141W TRX1P22217 103 aaKnown RBP9.45□□□□□ -0.9
VPS62YGR141W TRM2P33753 639 aa9.45□□□□□ -0.9
VPS62YGR141W SET3P36124 751 aa9.45□□□□□ -0.9
VPS62YGR141W MED8P38304 223 aa9.45□□□□□ -0.9
VPS62YGR141W MXR1P40029 184 aa9.45□□□□□ -0.9
VPS62YGR141W SPR3P41901 512 aa9.45□□□□□ -0.9
VPS62YGR141W ZIP2P53061 704 aa9.45□□□□□ -0.9
VPS62YGR141W JIP4Q03361 876 aa9.45□□□□□ -0.9
VPS62YGR141W THI7Q05998 598 aa9.45□□□□□ -0.9
VPS62YGR141W KAP95Q06142 861 aaKnown RBP9.45□□□□□ -0.9
VPS62YGR141W NOB1Q08444 459 aaKnown RBP9.45□□□□□ -0.9
VPS62YGR141W WHI2P12611 486 aa9.44□□□□□ -0.9
VPS62YGR141W CBF1P17106 351 aa9.44□□□□□ -0.9
VPS62YGR141W YUR1P26725 428 aa9.44□□□□□ -0.9
VPS62YGR141W HEK2P38199 381 aaKnown RBP RIP-Chip data9.44□□□□□ -0.9not detected
VPS62YGR141W OCA5P38738 679 aa9.44□□□□□ -0.9
VPS62YGR141W TDA10P42938 290 aa9.44□□□□□ -0.9
VPS62YGR141W MND1P53102 219 aa9.44□□□□□ -0.9
VPS62YGR141W ATG1P53104 897 aa9.44□□□□□ -0.9
VPS62YGR141W GPD1Q00055 391 aaKnown RBP9.44□□□□□ -0.9
VPS62YGR141W VPS16Q03308 798 aa9.44□□□□□ -0.9
VPS62YGR141W YDR338CQ05497 695 aa9.44□□□□□ -0.9
VPS62YGR141W CMS1Q07897 291 aaKnown RBP9.44□□□□□ -0.9
VPS62YGR141W PCD1Q12524 340 aa9.44□□□□□ -0.9
VPS62YGR141W PMR1P13586 950 aa9.43□□□□□ -0.9
VPS62YGR141W AFT1P22149 690 aa9.43□□□□□ -0.9
VPS62YGR141W KAR4P25583 335 aa9.43□□□□□ -0.9
VPS62YGR141W OXP1P28273 1286 aa9.43□□□□□ -0.9
VPS62YGR141W SWC5P38326 303 aa9.43□□□□□ -0.9
VPS62YGR141W REV7P38927 245 aa9.43□□□□□ -0.9
VPS62YGR141W SAE2P46946 345 aa9.43□□□□□ -0.9
Retrieved 100 of 5,963 RNA–protein pairs in 9.3 ms