RNA–Protein interactions for RNA: YEL031W

SPF1, Transcript of P-type ATPase, ion transporter of the ER membrane, yeastyeast

Gene SPF1, Length 3,648 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SPF1YEL031W KAR4P25583 335 aa2.49□□□□□ -2.01
SPF1YEL031W SLA1P32790 1244 aa2.49□□□□□ -2.01
SPF1YEL031W HES1P35843 434 aa2.49□□□□□ -2.01
SPF1YEL031W TPO5P36029 618 aa2.49□□□□□ -2.01
SPF1YEL031W NTR2P36118 322 aaPredicted RBP2.49□□□□□ -2.01
SPF1YEL031W CCL1P37366 393 aa2.49□□□□□ -2.01
SPF1YEL031W YBR259WP38338 688 aa2.49□□□□□ -2.01
SPF1YEL031W GGA2P38817 585 aaKnown RBP2.49□□□□□ -2.01
SPF1YEL031W SPC97P38863 823 aa2.49□□□□□ -2.01
SPF1YEL031W TIF11P38912 153 aaKnown RBP2.49□□□□□ -2.01
SPF1YEL031W YFL034WP43564 1073 aa2.49□□□□□ -2.01
SPF1YEL031W ALB1P47019 175 aaPredicted RBP2.49□□□□□ -2.01
SPF1YEL031W LIA1P47120 325 aaKnown RBP2.49□□□□□ -2.01
SPF1YEL031W BIR1P47134 954 aa2.49□□□□□ -2.01
SPF1YEL031W GCV2P49095 1034 aa2.49□□□□□ -2.01
SPF1YEL031W CLU1Q03690 1277 aaKnown RBP2.49□□□□□ -2.01
SPF1YEL031W FMN1Q03778 218 aa2.49□□□□□ -2.01
SPF1YEL031W VPS64Q03944 604 aa2.49□□□□□ -2.01
SPF1YEL031W ITT1Q04638 464 aa2.49□□□□□ -2.01
SPF1YEL031W MLH2Q07980 695 aa2.49□□□□□ -2.01
SPF1YEL031W HER1Q12276 1246 aa2.49□□□□□ -2.01
SPF1YEL031W HTZ1Q12692 134 aaKnown RBP2.49□□□□□ -2.01
SPF1YEL031W VPS5Q92331 675 aa2.49□□□□□ -2.01
SPF1YEL031W LAM4P38800 1345 aa2.48□□□□□ -2.01
SPF1YEL031W PAB1P04147 577 aaKnown RBP RIP-Chip data2.48□□□□□ -2.01not detected
SPF1YEL031W ILV2P07342 687 aaKnown RBP2.48□□□□□ -2.01
SPF1YEL031W PET494P07390 489 aaPredicted RBP2.48□□□□□ -2.01
SPF1YEL031W SEN2P16658 377 aa2.48□□□□□ -2.01
SPF1YEL031W TFC1P32367 649 aa2.48□□□□□ -2.01
SPF1YEL031W VPS35P34110 944 aa2.48□□□□□ -2.01
SPF1YEL031W MYO3P36006 1272 aa2.48□□□□□ -2.01
SPF1YEL031W CUE2P36075 443 aaKnown RBP2.48□□□□□ -2.01
SPF1YEL031W ETR1P38071 380 aa2.48□□□□□ -2.01
SPF1YEL031W GOS1P38736 223 aa2.48□□□□□ -2.01
SPF1YEL031W UTP9P38882 575 aaKnown RBP2.48□□□□□ -2.01
SPF1YEL031W ARC1P46672 376 aaKnown RBP2.48□□□□□ -2.01
SPF1YEL031W UBA2P52488 636 aa2.48□□□□□ -2.01
SPF1YEL031W TEL2P53038 688 aa2.48□□□□□ -2.01
SPF1YEL031W ZIP2P53061 704 aa2.48□□□□□ -2.01
SPF1YEL031W MND1P53102 219 aa2.48□□□□□ -2.01
SPF1YEL031W RCF2P53721 224 aa2.48□□□□□ -2.01
SPF1YEL031W YNL040WP53960 456 aaPredicted RBP2.48□□□□□ -2.01
SPF1YEL031W RPL6AQ02326 176 aaKnown RBP2.48□□□□□ -2.01
SPF1YEL031W NOG1Q02892 647 aaKnown RBP2.48□□□□□ -2.01
SPF1YEL031W PKH3Q03306 898 aaPredicted RBP2.48□□□□□ -2.01
SPF1YEL031W SPO71Q03868 1245 aa2.48□□□□□ -2.01
SPF1YEL031W PPM1Q04081 328 aa2.48□□□□□ -2.01
SPF1YEL031W CSM3Q04659 317 aa2.48□□□□□ -2.01
SPF1YEL031W TOS4Q06266 489 aa2.48□□□□□ -2.01
SPF1YEL031W NOP12Q08208 459 aaKnown RBP2.48□□□□□ -2.01
SPF1YEL031W TY1B-AO13527 1196 aaKnown RBP2.48□□□□□ -2.01
SPF1YEL031W YLR462WO13556 202 aa2.48□□□□□ -2.01
SPF1YEL031W TIF1P10081 395 aaKnown RBP2.48□□□□□ -2.01
SPF1YEL031W RSR1P13856 272 aa2.48□□□□□ -2.01
SPF1YEL031W PMS1P14242 873 aa2.48□□□□□ -2.01
SPF1YEL031W YAK1P14680 807 aa2.48□□□□□ -2.01
SPF1YEL031W VMA2P16140 517 aaKnown RBP2.48□□□□□ -2.01
SPF1YEL031W KTR2P33550 425 aa2.48□□□□□ -2.01
SPF1YEL031W HCS1P34243 683 aa2.48□□□□□ -2.01
SPF1YEL031W WHI3P34761 661 aaKnown RBP2.48□□□□□ -2.01
SPF1YEL031W RCN1P36054 211 aa2.48□□□□□ -2.01
SPF1YEL031W SPC42P36094 363 aa2.48□□□□□ -2.01
SPF1YEL031W MUM2P38236 366 aa2.48□□□□□ -2.01
SPF1YEL031W POP4P38336 279 aa2.48□□□□□ -2.01
SPF1YEL031W YHL049CP38722 271 aa2.48□□□□□ -2.01
SPF1YEL031W KEL1P38853 1164 aaKnown RBP2.48□□□□□ -2.01
SPF1YEL031W RTS1P38903 757 aa2.48□□□□□ -2.01
SPF1YEL031W YEL075CP39972 122 aa2.48□□□□□ -2.01
SPF1YEL031W DLD3P39976 496 aaKnown RBP2.48□□□□□ -2.01
SPF1YEL031W YER189WP40104 122 aa2.48□□□□□ -2.01
SPF1YEL031W PRK1P40494 810 aa2.48□□□□□ -2.01
SPF1YEL031W YFL064CP43540 174 aa2.48□□□□□ -2.01
SPF1YEL031W ROG3P43602 733 aa2.48□□□□□ -2.01
SPF1YEL031W CSN12P47130 423 aa2.48□□□□□ -2.01
SPF1YEL031W NUP84P52891 726 aa2.48□□□□□ -2.01
SPF1YEL031W ZDS2P54786 942 aa2.48□□□□□ -2.01
SPF1YEL031W ATG16Q03818 150 aa2.48□□□□□ -2.01
SPF1YEL031W YMR027WQ04371 470 aa2.48□□□□□ -2.01
SPF1YEL031W TDA9Q04545 1251 aa2.48□□□□□ -2.01
SPF1YEL031W PNP1Q05788 311 aa2.48□□□□□ -2.01
SPF1YEL031W GPI13Q07830 1017 aa2.48□□□□□ -2.01
SPF1YEL031W YLR001CQ07895 862 aa2.48□□□□□ -2.01
SPF1YEL031W PEX15Q08215 383 aa2.48□□□□□ -2.01
SPF1YEL031W CIR2Q08822 631 aa2.48□□□□□ -2.01
SPF1YEL031W SNX3Q08826 162 aaKnown RBP2.48□□□□□ -2.01
SPF1YEL031W VPS54Q12071 889 aa2.48□□□□□ -2.01
SPF1YEL031W SLM3Q12093 417 aa2.48□□□□□ -2.01
SPF1YEL031W MED1Q12321 566 aa2.48□□□□□ -2.01
SPF1YEL031W YBL111CQ3E7Y5 667 aa2.48□□□□□ -2.01
SPF1YEL031W CDC6P09119 513 aa2.48□□□□□ -2.01
SPF1YEL031W TSR4P25040 408 aa2.48□□□□□ -2.01
SPF1YEL031W ATP7P30902 174 aa2.48□□□□□ -2.01
SPF1YEL031W FRD1P32614 470 aaKnown RBP2.48□□□□□ -2.01
SPF1YEL031W TRZ1P36159 838 aaPredicted RBP2.48□□□□□ -2.01
SPF1YEL031W YBL036CP38197 257 aa2.48□□□□□ -2.01
SPF1YEL031W KIC1P38692 1080 aa2.48□□□□□ -2.01
SPF1YEL031W YHR020WP38708 688 aaKnown RBP2.48□□□□□ -2.01
SPF1YEL031W TRM5P38793 499 aa2.48□□□□□ -2.01
SPF1YEL031W PEX18P38855 283 aa2.48□□□□□ -2.01
SPF1YEL031W ATG7P38862 630 aa2.48□□□□□ -2.01
Retrieved 100 of 5,963 RNA–protein pairs in 167 ms