RNA–Protein interactions for RNA: YDR515W

SLF1, Transcript of RNA binding protein that associates with polysomes, yeast

Gene SLF1, Length 1,344 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SLF1	YDR515W	AKL1	P38080	1108 aa	Known RBP	4.22	□□□□□ -1.73
SLF1	YDR515W	PCL5	P38794	229 aa		4.22	□□□□□ -1.73
SLF1	YDR515W	YJR096W	P47137	282 aa		4.22	□□□□□ -1.73
SLF1	YDR515W	PAN2	P53010	1115 aa	Predicted RBP	4.22	□□□□□ -1.73
SLF1	YDR515W	GND2	P53319	492 aa		4.22	□□□□□ -1.73
SLF1	YDR515W	DOS2	P54858	310 aa		4.22	□□□□□ -1.73
SLF1	YDR515W	MVD1	P32377	396 aa	Known RBP	4.21	□□□□□ -1.73
SLF1	YDR515W	MTH1	P35198	433 aa		4.21	□□□□□ -1.73
SLF1	YDR515W	HRB1	P38922	454 aa	Known RBP RIP-Chip data	4.21	□□□□□ -1.73	not detected
SLF1	YDR515W	REV7	P38927	245 aa		4.21	□□□□□ -1.73
SLF1	YDR515W	NUG1	P40010	520 aa	Known RBP	4.21	□□□□□ -1.73
SLF1	YDR515W	NOP9	P47077	666 aa	Known RBP	4.21	□□□□□ -1.73
SLF1	YDR515W	YAP1802	P53309	568 aa		4.21	□□□□□ -1.73
SLF1	YDR515W	IRC10	Q08118	586 aa		4.21	□□□□□ -1.73
SLF1	YDR515W	YKL033W-A	Q86ZR7	236 aa		4.21	□□□□□ -1.73
SLF1	YDR515W	PEX1	P24004	1043 aa		4.21	□□□□□ -1.74
SLF1	YDR515W	MAL31	P38156	614 aa		4.21	□□□□□ -1.74
SLF1	YDR515W	SFB3	P38810	929 aa		4.21	□□□□□ -1.74
SLF1	YDR515W	CKB2	P38930	258 aa		4.21	□□□□□ -1.74
SLF1	YDR515W	BEM4	P39011	633 aa		4.21	□□□□□ -1.74
SLF1	YDR515W	YNL195C	P40168	261 aa		4.21	□□□□□ -1.74
SLF1	YDR515W	QRI1	P43123	477 aa	Known RBP	4.21	□□□□□ -1.74
SLF1	YDR515W	STU2	P46675	888 aa		4.21	□□□□□ -1.74
SLF1	YDR515W	HLJ1	P48353	224 aa		4.21	□□□□□ -1.74
SLF1	YDR515W	SSL2	Q00578	843 aa		4.21	□□□□□ -1.74
SLF1	YDR515W	THI73	Q07904	523 aa		4.21	□□□□□ -1.74
SLF1	YDR515W	YGR161W-C	Q3E744	92 aa		4.21	□□□□□ -1.74
SLF1	YDR515W	ECM3	Q99252	613 aa		4.21	□□□□□ -1.74
SLF1	YDR515W	SSD1	P24276	1250 aa	Known RBP RIP-Chip data	4.2	□□□□□ -1.74	not detected
SLF1	YDR515W	SPC42	P36094	363 aa		4.2	□□□□□ -1.74
SLF1	YDR515W	YHR202W	P38887	602 aa		4.2	□□□□□ -1.74
SLF1	YDR515W	RET2	P43621	546 aa		4.2	□□□□□ -1.74
SLF1	YDR515W	COX18	P53239	316 aa		4.2	□□□□□ -1.74
SLF1	YDR515W	FHN1	P53279	174 aa		4.2	□□□□□ -1.74
SLF1	YDR515W	YNR029C	P53729	429 aa	Known RBP	4.2	□□□□□ -1.74
SLF1	YDR515W	SMX3	P54999	86 aa	Predicted RBP	4.2	□□□□□ -1.74
SLF1	YDR515W	GPD1	Q00055	391 aa	Known RBP	4.2	□□□□□ -1.74
SLF1	YDR515W	THI22	Q06490	572 aa		4.2	□□□□□ -1.74
SLF1	YDR515W	PRP19	P32523	503 aa	Known RBP	4.19	□□□□□ -1.74
SLF1	YDR515W	SEC6	P32844	805 aa		4.19	□□□□□ -1.74
SLF1	YDR515W	YPT7	P32939	208 aa		4.19	□□□□□ -1.74
SLF1	YDR515W	PHO11	P35842	467 aa		4.19	□□□□□ -1.74
SLF1	YDR515W	PHO12	P38693	467 aa		4.19	□□□□□ -1.74
SLF1	YDR515W	CRP1	P38845	465 aa	Known RBP	4.19	□□□□□ -1.74
SLF1	YDR515W	RSC8	P43609	557 aa	Known RBP	4.19	□□□□□ -1.74
SLF1	YDR515W	MTQ2	Q03920	221 aa	Predicted RBP	4.19	□□□□□ -1.74
SLF1	YDR515W	ISA1	Q07821	250 aa	Predicted RBP	4.19	□□□□□ -1.74
SLF1	YDR515W	MLH3	Q12083	715 aa		4.19	□□□□□ -1.74
SLF1	YDR515W	MRH1	Q12117	320 aa	Predicted RBP	4.19	□□□□□ -1.74
SLF1	YDR515W	TYS1	P36421	394 aa	Known RBP	4.18	□□□□□ -1.74
SLF1	YDR515W	TDA3	P38758	523 aa		4.18	□□□□□ -1.74
SLF1	YDR515W	PMT3	P47190	753 aa		4.18	□□□□□ -1.74
SLF1	YDR515W	GPG1	P53130	126 aa		4.18	□□□□□ -1.74
SLF1	YDR515W	VPS36	Q06696	566 aa		4.18	□□□□□ -1.74
SLF1	YDR515W	MSL5	Q12186	476 aa	Known RBP RIP-Chip data	4.18	□□□□□ -1.74	not detected
SLF1	YDR515W	NUP145	P49687	1317 aa		4.17	□□□□□ -1.74
SLF1	YDR515W	IMG2	P25642	146 aa	Predicted RBP	4.17	□□□□□ -1.74
SLF1	YDR515W	BRN1	P38170	754 aa		4.17	□□□□□ -1.74
SLF1	YDR515W	CBR1	P38626	284 aa	Known RBP	4.17	□□□□□ -1.74
SLF1	YDR515W	CCT5	P40413	562 aa	Known RBP	4.17	□□□□□ -1.74
SLF1	YDR515W	UME1	Q03010	460 aa		4.17	□□□□□ -1.74
SLF1	YDR515W	YLR407W	Q06070	228 aa		4.17	□□□□□ -1.74
SLF1	YDR515W	DIA2	Q08496	732 aa	Predicted RBP	4.17	□□□□□ -1.74
SLF1	YDR515W	CLF1	Q12309	687 aa	Predicted RBP	4.17	□□□□□ -1.74
SLF1	YDR515W	ZRT2	Q12436	422 aa		4.17	□□□□□ -1.74
SLF1	YDR515W	SWI6	P09959	803 aa		4.16	□□□□□ -1.74
SLF1	YDR515W	THR1	P17423	357 aa	Known RBP	4.16	□□□□□ -1.74
SLF1	YDR515W	PET127	P32606	800 aa		4.16	□□□□□ -1.74
SLF1	YDR515W	YKU70	P32807	602 aa		4.16	□□□□□ -1.74
SLF1	YDR515W	BCS1	P32839	456 aa		4.16	□□□□□ -1.74
SLF1	YDR515W	YKR075C	P36155	307 aa		4.16	□□□□□ -1.74
SLF1	YDR515W	UBS1	P38290	277 aa		4.16	□□□□□ -1.74
SLF1	YDR515W	BIT2	P38346	545 aa		4.16	□□□□□ -1.74
SLF1	YDR515W	NDC80	P40460	691 aa		4.16	□□□□□ -1.74
SLF1	YDR515W	CCT7	P42943	550 aa	Known RBP	4.16	□□□□□ -1.74
SLF1	YDR515W	GZF3	P42944	551 aa	Known RBP	4.16	□□□□□ -1.74
SLF1	YDR515W	YGR153W	P48238	217 aa		4.16	□□□□□ -1.74
SLF1	YDR515W	VHS3	Q08438	674 aa		4.16	□□□□□ -1.74
SLF1	YDR515W	ERG20	P08524	352 aa	Known RBP	4.15	□□□□□ -1.75
SLF1	YDR515W	FRS1	P15624	595 aa	Known RBP	4.15	□□□□□ -1.75
SLF1	YDR515W	IME1	P21190	360 aa		4.15	□□□□□ -1.75
SLF1	YDR515W	HXT6	P39003	570 aa	Known RBP	4.15	□□□□□ -1.75
SLF1	YDR515W	HXT7	P39004	570 aa		4.15	□□□□□ -1.75
SLF1	YDR515W	PIG2	P40187	538 aa		4.15	□□□□□ -1.75
SLF1	YDR515W	BIT61	P47041	543 aa		4.15	□□□□□ -1.75
SLF1	YDR515W	ATG4	P53867	494 aa		4.15	□□□□□ -1.75
SLF1	YDR515W	ECM9	Q02202	377 aa		4.15	□□□□□ -1.75
SLF1	YDR515W	YPS7	Q06325	596 aa		4.15	□□□□□ -1.75
SLF1	YDR515W	TAF3	Q12297	353 aa		4.15	□□□□□ -1.75
SLF1	YDR515W	POM34	Q12445	299 aa		4.15	□□□□□ -1.75
SLF1	YDR515W	RPS21B	Q3E754	87 aa	Known RBP	4.15	□□□□□ -1.75
SLF1	YDR515W	KIN3	P22209	435 aa		4.14	□□□□□ -1.75
SLF1	YDR515W	PRP28	P23394	588 aa		4.14	□□□□□ -1.75
SLF1	YDR515W	FEN2	P25621	512 aa	Known RBP	4.14	□□□□□ -1.75
SLF1	YDR515W	SET3	P36124	751 aa		4.14	□□□□□ -1.75
SLF1	YDR515W	OAF1	P39720	1047 aa	Predicted RBP	4.14	□□□□□ -1.75
SLF1	YDR515W	ARG2	P40360	574 aa		4.14	□□□□□ -1.75
SLF1	YDR515W	GPP1	P41277	250 aa	Known RBP	4.14	□□□□□ -1.75
SLF1	YDR515W	BFA1	P47113	574 aa		4.14	□□□□□ -1.75
SLF1	YDR515W	RCR2	Q03446	210 aa	Known RBP	4.14	□□□□□ -1.75

Retrieved 100 of 5,963 RNA–protein pairs in 37.8 ms