RNA–Protein interactions for RNA: YDR146C

SWI5, Transcript of Transcription factor that recruits Mediator and Swi/Snf complexes, yeastyeast

Gene SWI5, Length 2,130 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SWI5YDR146C RPS21BQ3E754 87 aaKnown RBP2.32□□□□□ -2.04
SWI5YDR146C ALG7P07286 448 aa2.32□□□□□ -2.04
SWI5YDR146C PYC1P11154 1178 aaKnown RBP2.32□□□□□ -2.04
SWI5YDR146C RNR1P21524 888 aaKnown RBP2.32□□□□□ -2.04
SWI5YDR146C OAF3P36023 863 aa2.32□□□□□ -2.04
SWI5YDR146C APN2P38207 520 aa2.32□□□□□ -2.04
SWI5YDR146C TDA3P38758 523 aa2.32□□□□□ -2.04
SWI5YDR146C BCD1P38772 366 aa2.32□□□□□ -2.04
SWI5YDR146C NOP9P47077 666 aaKnown RBP2.32□□□□□ -2.04
SWI5YDR146C YGR153WP48238 217 aa2.32□□□□□ -2.04
SWI5YDR146C UBC11P52492 156 aa2.32□□□□□ -2.04
SWI5YDR146C MTL1P53214 551 aa2.32□□□□□ -2.04
SWI5YDR146C REC102Q02721 264 aa2.32□□□□□ -2.04
SWI5YDR146C HFD1Q04458 532 aa2.32□□□□□ -2.04
SWI5YDR146C GAD1Q04792 585 aa2.32□□□□□ -2.04
SWI5YDR146C URN1Q06525 465 aaKnown RBP2.32□□□□□ -2.04
SWI5YDR146C RPS21AP0C0V8 87 aaKnown RBP2.31□□□□□ -2.04
SWI5YDR146C TSR4P25040 408 aa2.31□□□□□ -2.04
SWI5YDR146C IMG2P25642 146 aaPredicted RBP2.31□□□□□ -2.04
SWI5YDR146C HIR1P32479 840 aa2.31□□□□□ -2.04
SWI5YDR146C YKU70P32807 602 aa2.31□□□□□ -2.04
SWI5YDR146C TRZ1P36159 838 aaPredicted RBP2.31□□□□□ -2.04
SWI5YDR146C ENP1P38333 483 aaKnown RBP2.31□□□□□ -2.04
SWI5YDR146C FMO1P38866 432 aa2.31□□□□□ -2.04
SWI5YDR146C YHR202WP38887 602 aa2.31□□□□□ -2.04
SWI5YDR146C IES1P43579 692 aa2.31□□□□□ -2.04
SWI5YDR146C RCR2Q03446 210 aaKnown RBP2.31□□□□□ -2.04
SWI5YDR146C YLR407WQ06070 228 aa2.31□□□□□ -2.04
SWI5YDR146C THI22Q06490 572 aa2.31□□□□□ -2.04
SWI5YDR146C IRC13Q08630 104 aa2.31□□□□□ -2.04
SWI5YDR146C FAP7Q12055 197 aaPredicted RBP2.31□□□□□ -2.04
SWI5YDR146C CDC26P14724 124 aa2.3□□□□□ -2.04
SWI5YDR146C PEX1P24004 1043 aa2.3□□□□□ -2.04
SWI5YDR146C EUG1P32474 517 aa2.3□□□□□ -2.04
SWI5YDR146C APT2P36973 181 aa2.3□□□□□ -2.04
SWI5YDR146C PPS1P38148 807 aa2.3□□□□□ -2.04
SWI5YDR146C FAT1P38225 669 aa2.3□□□□□ -2.04
SWI5YDR146C HRB1P38922 454 aaKnown RBP RIP-Chip data2.3□□□□□ -2.04not detected
SWI5YDR146C CCT3P39077 534 aaKnown RBP2.3□□□□□ -2.04
SWI5YDR146C NUP60P39705 539 aa2.3□□□□□ -2.04
SWI5YDR146C FMP52P40008 231 aa2.3□□□□□ -2.04
SWI5YDR146C GPP2P40106 250 aaKnown RBP2.3□□□□□ -2.04
SWI5YDR146C YNL195CP40168 261 aa2.3□□□□□ -2.04
SWI5YDR146C DUG1P43616 481 aaKnown RBP2.3□□□□□ -2.04
SWI5YDR146C YPS7Q06325 596 aa2.3□□□□□ -2.04
SWI5YDR146C OMS1Q06668 471 aa2.3□□□□□ -2.04
SWI5YDR146C SSB1P11484 613 aaKnown RBP2.3□□□□□ -2.04
SWI5YDR146C DID4P36108 232 aa2.3□□□□□ -2.04
SWI5YDR146C SUL1P38359 859 aa2.3□□□□□ -2.04
SWI5YDR146C SSB2P40150 613 aaKnown RBP2.3□□□□□ -2.04
SWI5YDR146C NIT2P47016 307 aa2.3□□□□□ -2.04
SWI5YDR146C FHN1P53279 174 aa2.3□□□□□ -2.04
SWI5YDR146C NOP15P53927 220 aaPredicted RBP2.3□□□□□ -2.04
SWI5YDR146C COG6P53959 839 aa2.3□□□□□ -2.04
SWI5YDR146C CTF4Q01454 927 aa2.3□□□□□ -2.04
SWI5YDR146C VPS36Q06696 566 aa2.3□□□□□ -2.04
SWI5YDR146C STP4Q07351 490 aa2.3□□□□□ -2.04
SWI5YDR146C TMA17Q12513 150 aa2.3□□□□□ -2.04
SWI5YDR146C ECM3Q99252 613 aa2.3□□□□□ -2.04
SWI5YDR146C FRS1P15624 595 aaKnown RBP2.29□□□□□ -2.04
SWI5YDR146C DAL3P32459 195 aa2.29□□□□□ -2.04
SWI5YDR146C PET127P32606 800 aa2.29□□□□□ -2.04
SWI5YDR146C SER1P33330 395 aaKnown RBP2.29□□□□□ -2.04
SWI5YDR146C YBR071WP38243 211 aa2.29□□□□□ -2.04
SWI5YDR146C RSC8P43609 557 aaKnown RBP2.29□□□□□ -2.04
SWI5YDR146C BIT61P47041 543 aa2.29□□□□□ -2.04
SWI5YDR146C YJR120WP47157 116 aa2.29□□□□□ -2.04
SWI5YDR146C GPD1Q00055 391 aaKnown RBP2.29□□□□□ -2.04
SWI5YDR146C CTK1Q03957 528 aaKnown RBP2.29□□□□□ -2.04
SWI5YDR146C RPS17AP02407 136 aaKnown RBP2.29□□□□□ -2.04
SWI5YDR146C RPS17BP14127 136 aaKnown RBP2.29□□□□□ -2.04
SWI5YDR146C MRC1P25588 1096 aa2.29□□□□□ -2.04
SWI5YDR146C SEC65P29478 273 aa2.29□□□□□ -2.04
SWI5YDR146C BUD8P41698 603 aa2.29□□□□□ -2.04
SWI5YDR146C PAN2P53010 1115 aaPredicted RBP2.29□□□□□ -2.04
SWI5YDR146C TEL2P53038 688 aa2.29□□□□□ -2.04
SWI5YDR146C MUK1Q02866 612 aa2.29□□□□□ -2.04
SWI5YDR146C ISA1Q07821 250 aaPredicted RBP2.29□□□□□ -2.04
SWI5YDR146C SGO1Q08490 590 aa2.29□□□□□ -2.04
SWI5YDR146C ACO1P19414 778 aaKnown RBP RIP-Chip data2.28□□□□□ -2.04not detected
SWI5YDR146C MF(ALPHA)2P32435 120 aa2.28□□□□□ -2.04
SWI5YDR146C MSS1P32559 526 aaPredicted RBP2.28□□□□□ -2.04
SWI5YDR146C MTC7P32633 139 aa2.28□□□□□ -2.04
SWI5YDR146C OAR1P35731 278 aa2.28□□□□□ -2.04
SWI5YDR146C MOH1P38191 138 aa2.28□□□□□ -2.04
SWI5YDR146C UBS1P38290 277 aa2.28□□□□□ -2.04
SWI5YDR146C BIT2P38346 545 aa2.28□□□□□ -2.04
SWI5YDR146C YHM2Q04013 314 aa2.28□□□□□ -2.04
SWI5YDR146C VHS3Q08438 674 aa2.28□□□□□ -2.04
SWI5YDR146C NOP56Q12460 504 aaKnown RBP RIP-Chip data2.28□□□□□ -2.04not detected
SWI5YDR146C YKL033W-AQ86ZR7 236 aa2.28□□□□□ -2.04
SWI5YDR146C GLN4P13188 809 aaKnown RBP2.27□□□□□ -2.05
SWI5YDR146C ATP12P22135 325 aa2.27□□□□□ -2.05
SWI5YDR146C BCS1P32839 456 aa2.27□□□□□ -2.05
SWI5YDR146C PHO11P35842 467 aa2.27□□□□□ -2.05
SWI5YDR146C PHO12P38693 467 aa2.27□□□□□ -2.05
SWI5YDR146C YHL017WP38745 532 aa2.27□□□□□ -2.05
SWI5YDR146C VID28P40547 921 aa2.27□□□□□ -2.05
SWI5YDR146C RIA1P53893 1110 aa2.27□□□□□ -2.05
SWI5YDR146C SMX3P54999 86 aaPredicted RBP2.27□□□□□ -2.05
Retrieved 100 of 5,963 RNA–protein pairs in 10.4 ms