RNA–Protein interactions for RNA: YDR126W

SWF1, Transcript of Palmitoyltransferase that acts on transmembrane proteins, yeast

Gene SWF1, Length 1,011 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SWF1	YDR126W	USV1	Q12132	391 aa		3.58	□□□□□ -1.84
SWF1	YDR126W	STI1	P15705	589 aa	Known RBP RIP-Chip data	3.57	□□□□□ -1.84	not detected
SWF1	YDR126W	GMH1	P36125	273 aa		3.57	□□□□□ -1.84
SWF1	YDR126W	MAL11	P53048	616 aa		3.57	□□□□□ -1.84
SWF1	YDR126W	SNP1	Q00916	300 aa	Predicted RBP	3.57	□□□□□ -1.84
SWF1	YDR126W	RIM13	Q03792	727 aa		3.57	□□□□□ -1.84
SWF1	YDR126W	NSE3	Q05541	303 aa		3.57	□□□□□ -1.84
SWF1	YDR126W	CDC53	Q12018	815 aa	Known RBP	3.57	□□□□□ -1.84
SWF1	YDR126W	Q0142	Q9ZZW4	58 aa		3.57	□□□□□ -1.84
SWF1	YDR126W	SET3	P36124	751 aa		3.56	□□□□□ -1.84
SWF1	YDR126W	CHZ1	P40019	153 aa	Predicted RBP	3.56	□□□□□ -1.84
SWF1	YDR126W	CAF16	P43569	289 aa		3.56	□□□□□ -1.84
SWF1	YDR126W	SLK19	Q08581	821 aa	Known RBP	3.56	□□□□□ -1.84
SWF1	YDR126W	ABF1	P14164	731 aa		3.55	□□□□□ -1.84
SWF1	YDR126W	KCC4	P25389	1037 aa		3.55	□□□□□ -1.84
SWF1	YDR126W	YKR018C	P36114	725 aa		3.55	□□□□□ -1.84
SWF1	YDR126W	YKR051W	P36142	418 aa		3.55	□□□□□ -1.84
SWF1	YDR126W	HSL7	P38274	827 aa		3.55	□□□□□ -1.84
SWF1	YDR126W	NOP9	P47077	666 aa	Known RBP	3.55	□□□□□ -1.84
SWF1	YDR126W	PCL10	P53124	433 aa		3.55	□□□□□ -1.84
SWF1	YDR126W	RPN7	Q06103	429 aa	Known RBP	3.55	□□□□□ -1.84
SWF1	YDR126W	MDM12	Q92328	271 aa		3.55	□□□□□ -1.84
SWF1	YDR126W	PRP28	P23394	588 aa		3.54	□□□□□ -1.84
SWF1	YDR126W	MIH1	P23748	554 aa		3.54	□□□□□ -1.84
SWF1	YDR126W	BIT2	P38346	545 aa		3.54	□□□□□ -1.84
SWF1	YDR126W	PIG2	P40187	538 aa		3.54	□□□□□ -1.84
SWF1	YDR126W	THI22	Q06490	572 aa		3.54	□□□□□ -1.84
SWF1	YDR126W	DIA2	Q08496	732 aa	Predicted RBP	3.54	□□□□□ -1.84
SWF1	YDR126W	BMS1	Q08965	1183 aa	Known RBP	3.54	□□□□□ -1.84
SWF1	YDR126W	CDC9	P04819	755 aa		3.53	□□□□□ -1.84
SWF1	YDR126W	GSY1	P23337	708 aa		3.53	□□□□□ -1.84
SWF1	YDR126W	BCS1	P32839	456 aa		3.53	□□□□□ -1.84
SWF1	YDR126W	SEC6	P32844	805 aa		3.53	□□□□□ -1.84
SWF1	YDR126W	LTP1	P40347	161 aa		3.53	□□□□□ -1.84
SWF1	YDR126W	RSC8	P43609	557 aa	Known RBP	3.53	□□□□□ -1.84
SWF1	YDR126W	BNA3	P47039	444 aa	Known RBP	3.53	□□□□□ -1.84
SWF1	YDR126W	YGR151C	P53287	111 aa		3.53	□□□□□ -1.84
SWF1	YDR126W	NHX1	Q04121	633 aa		3.53	□□□□□ -1.84
SWF1	YDR126W	ERR1	P0CX10	437 aa		3.52	□□□□□ -1.85
SWF1	YDR126W	ERR2	P0CX11	437 aa		3.52	□□□□□ -1.85
SWF1	YDR126W	HOG1	P32485	435 aa		3.52	□□□□□ -1.85
SWF1	YDR126W	YMC2	P38087	329 aa		3.52	□□□□□ -1.85
SWF1	YDR126W	NNF1	P47149	201 aa		3.52	□□□□□ -1.85
SWF1	YDR126W	COX18	P53239	316 aa		3.52	□□□□□ -1.85
SWF1	YDR126W	YOR131C	Q12486	218 aa		3.52	□□□□□ -1.85
SWF1	YDR126W	ECM3	Q99252	613 aa		3.52	□□□□□ -1.85
SWF1	YDR126W	RAD18	P10862	487 aa		3.51	□□□□□ -1.85
SWF1	YDR126W	RPA135	P22138	1203 aa	Known RBP	3.51	□□□□□ -1.85
SWF1	YDR126W	SAT4	P25333	603 aa	Known RBP	3.51	□□□□□ -1.85
SWF1	YDR126W	MIT1	P40002	666 aa		3.51	□□□□□ -1.85
SWF1	YDR126W	SET2	P46995	733 aa	Known RBP	3.51	□□□□□ -1.85
SWF1	YDR126W	SPC98	P53540	846 aa		3.51	□□□□□ -1.85
SWF1	YDR126W	ARP4	P80428	489 aa		3.51	□□□□□ -1.85
SWF1	YDR126W	YDL086W	Q07505	273 aa		3.51	□□□□□ -1.85
SWF1	YDR126W	CHS5	Q12114	671 aa	Known RBP	3.51	□□□□□ -1.85
SWF1	YDR126W	PGK1	P00560	416 aa	Known RBP	3.5	□□□□□ -1.85
SWF1	YDR126W	CIT2	P08679	460 aa		3.5	□□□□□ -1.85
SWF1	YDR126W	ERG11	P10614	530 aa		3.5	□□□□□ -1.85
SWF1	YDR126W	PTP1	P25044	335 aa		3.5	□□□□□ -1.85
SWF1	YDR126W	UGP1	P32861	499 aa	Known RBP	3.5	□□□□□ -1.85
SWF1	YDR126W	CTP1	P38152	299 aa		3.5	□□□□□ -1.85
SWF1	YDR126W	APN2	P38207	520 aa		3.5	□□□□□ -1.85
SWF1	YDR126W	KSP1	P38691	1029 aa	Known RBP	3.5	□□□□□ -1.85
SWF1	YDR126W	PHO5	P00635	467 aa		3.49	□□□□□ -1.85
SWF1	YDR126W	ADE5,7	P07244	802 aa	Known RBP	3.49	□□□□□ -1.85
SWF1	YDR126W	SRD1	P09007	221 aa		3.49	□□□□□ -1.85
SWF1	YDR126W	STE12	P13574	688 aa		3.49	□□□□□ -1.85
SWF1	YDR126W	PMC1	P38929	1173 aa	Predicted RBP	3.49	□□□□□ -1.85
SWF1	YDR126W	GAT1	P43574	510 aa		3.49	□□□□□ -1.85
SWF1	YDR126W	MPS3	P47069	682 aa		3.49	□□□□□ -1.85
SWF1	YDR126W	LEE1	Q02799	301 aa	Known RBP	3.49	□□□□□ -1.85
SWF1	YDR126W	FMP30	Q02883	468 aa		3.49	□□□□□ -1.85
SWF1	YDR126W	COG8	Q04632	607 aa		3.49	□□□□□ -1.85
SWF1	YDR126W	YSH1	Q06224	779 aa	Predicted RBP	3.49	□□□□□ -1.85
SWF1	YDR126W	MEF1	P25039	761 aa		3.48	□□□□□ -1.85
SWF1	YDR126W	VBA3	P25594	458 aa		3.48	□□□□□ -1.85
SWF1	YDR126W	FEN2	P25621	512 aa	Known RBP	3.48	□□□□□ -1.85
SWF1	YDR126W	YHR097C	P38809	366 aa	Known RBP	3.48	□□□□□ -1.85
SWF1	YDR126W	DSS1	P39112	969 aa		3.48	□□□□□ -1.85
SWF1	YDR126W	YNL195C	P40168	261 aa		3.48	□□□□□ -1.85
SWF1	YDR126W	NET1	P47035	1189 aa		3.48	□□□□□ -1.85
SWF1	YDR126W	ASN1	P49089	572 aa	Known RBP	3.48	□□□□□ -1.85
SWF1	YDR126W	BRE5	P53741	515 aa	Known RBP	3.48	□□□□□ -1.85
SWF1	YDR126W	RPN4	Q03465	531 aa		3.48	□□□□□ -1.85
SWF1	YDR126W	RKI1	Q12189	258 aa		3.48	□□□□□ -1.85
SWF1	YDR126W	YOL098C	Q12496	1037 aa		3.48	□□□□□ -1.85
SWF1	YDR126W	YMC1	P32331	307 aa		3.47	□□□□□ -1.85
SWF1	YDR126W	TIM23	P32897	222 aa		3.47	□□□□□ -1.85
SWF1	YDR126W	APL3	P38065	1025 aa		3.47	□□□□□ -1.85
SWF1	YDR126W	SSZ1	P38788	538 aa	Known RBP	3.47	□□□□□ -1.85
SWF1	YDR126W	KHA1	P40309	873 aa		3.47	□□□□□ -1.85
SWF1	YDR126W	RFX1	P48743	811 aa		3.47	□□□□□ -1.85
SWF1	YDR126W	NMA2	P53204	395 aa		3.47	□□□□□ -1.85
SWF1	YDR126W	HFD1	Q04458	532 aa		3.47	□□□□□ -1.85
SWF1	YDR126W	ULA1	Q12059	462 aa		3.47	□□□□□ -1.85
SWF1	YDR126W	POM34	Q12445	299 aa		3.47	□□□□□ -1.85
SWF1	YDR126W	LAM4	P38800	1345 aa		3.46	□□□□□ -1.85
SWF1	YDR126W	TPK2	P06245	380 aa		3.46	□□□□□ -1.86
SWF1	YDR126W	NTH1	P32356	751 aa		3.46	□□□□□ -1.86
SWF1	YDR126W	SRP40	P32583	406 aa	Predicted RBP	3.46	□□□□□ -1.86

Retrieved 100 of 5,963 RNA–protein pairs in 13.1 ms