RNA–Protein interactions for RNA: YBL006C

LDB7, Transcript of Component of the RSC chromatin remodeling complex, yeastyeast

Gene LDB7, Length 543 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
LDB7YBL006C CEG1Q01159 459 aaPredicted RBP7.37□□□□□ -1.23
LDB7YBL006C AFT2Q08957 416 aa7.37□□□□□ -1.23
LDB7YBL006C NDJ1Q12366 352 aa7.37□□□□□ -1.23
LDB7YBL006C YDL206WQ12424 762 aa7.37□□□□□ -1.23
LDB7YBL006C MEX67Q99257 599 aaKnown RBP7.37□□□□□ -1.23
LDB7YBL006C TRP2P00899 507 aaKnown RBP7.36□□□□□ -1.23
LDB7YBL006C FUS1P11710 512 aa7.36□□□□□ -1.23
LDB7YBL006C EFB1P32471 206 aaKnown RBP7.36□□□□□ -1.23
LDB7YBL006C CBF2P32504 956 aa7.36□□□□□ -1.23
LDB7YBL006C ECM32P32644 1121 aaKnown RBP7.36□□□□□ -1.23
LDB7YBL006C YKL023WP36103 277 aaKnown RBP7.36□□□□□ -1.23
LDB7YBL006C KIC1P38692 1080 aa7.36□□□□□ -1.23
LDB7YBL006C RAD55P38953 406 aa7.36□□□□□ -1.23
LDB7YBL006C GEM1P39722 662 aa7.36□□□□□ -1.23
LDB7YBL006C CCT5P40413 562 aaKnown RBP7.36□□□□□ -1.23
LDB7YBL006C GYP8P43570 497 aa7.36□□□□□ -1.23
LDB7YBL006C YNR061CP53747 219 aa7.36□□□□□ -1.23
LDB7YBL006C MZM1Q03429 123 aaPredicted RBP7.36□□□□□ -1.23
LDB7YBL006C VMS1Q04311 632 aaKnown RBP7.36□□□□□ -1.23
LDB7YBL006C COG4Q06096 861 aa7.36□□□□□ -1.23
LDB7YBL006C VBA3P25594 458 aa7.35□□□□□ -1.23
LDB7YBL006C VBA5P36172 582 aa7.35□□□□□ -1.23
LDB7YBL006C FHL1P39521 936 aa7.35□□□□□ -1.23
LDB7YBL006C CHS6P40955 746 aa7.35□□□□□ -1.23
LDB7YBL006C YGR237CP50089 785 aa7.35□□□□□ -1.23
LDB7YBL006C GIR2Q03768 265 aaPredicted RBP7.35□□□□□ -1.23
LDB7YBL006C ECM22Q05958 814 aaPredicted RBP7.35□□□□□ -1.23
LDB7YBL006C TSR1Q07381 788 aaKnown RBP7.35□□□□□ -1.23
LDB7YBL006C YAP7Q08182 245 aa7.35□□□□□ -1.23
LDB7YBL006C SAM3Q08986 587 aa7.35□□□□□ -1.23
LDB7YBL006C LSP1Q12230 341 aaKnown RBP7.35□□□□□ -1.23
LDB7YBL006C ECM3Q99252 613 aa7.35□□□□□ -1.23
LDB7YBL006C MSB2P32334 1306 aa7.34□□□□□ -1.23
LDB7YBL006C KEX1P09620 729 aa7.34□□□□□ -1.23
LDB7YBL006C PDC6P26263 563 aaKnown RBP7.34□□□□□ -1.23
LDB7YBL006C DSS4P32601 143 aa7.34□□□□□ -1.23
LDB7YBL006C YBL036CP38197 257 aa7.34□□□□□ -1.23
LDB7YBL006C NEM1P38757 446 aa7.34□□□□□ -1.23
LDB7YBL006C CTM1P38818 585 aa7.34□□□□□ -1.23
LDB7YBL006C NUP60P39705 539 aa7.34□□□□□ -1.23
LDB7YBL006C AVT2P39981 480 aa7.34□□□□□ -1.23
LDB7YBL006C SHQ1P40486 507 aaPredicted RBP7.34□□□□□ -1.23
LDB7YBL006C SBE2P42223 864 aaKnown RBP7.34□□□□□ -1.23
LDB7YBL006C GUF1P46943 645 aa7.34□□□□□ -1.23
LDB7YBL006C FAA4P47912 694 aaKnown RBP7.34□□□□□ -1.23
LDB7YBL006C GCN5Q03330 439 aa7.34□□□□□ -1.23
LDB7YBL006C STE20Q03497 939 aaKnown RBP7.34□□□□□ -1.23
LDB7YBL006C YOR238WQ08634 303 aa7.34□□□□□ -1.23
LDB7YBL006C NBP2Q12163 236 aa7.34□□□□□ -1.23
LDB7YBL006C MPD2Q99316 277 aa7.34□□□□□ -1.23
LDB7YBL006C AI5_BETAQ9ZZX0 354 aa7.34□□□□□ -1.23
LDB7YBL006C MST1P07236 462 aa7.33□□□□□ -1.24
LDB7YBL006C DAL1P32375 460 aa7.33□□□□□ -1.24
LDB7YBL006C SWE1P32944 819 aa7.33□□□□□ -1.24
LDB7YBL006C YBR225WP38321 900 aa7.33□□□□□ -1.24
LDB7YBL006C TIF5P38431 405 aaKnown RBP7.33□□□□□ -1.24
LDB7YBL006C CIR1P42940 261 aa7.33□□□□□ -1.24
LDB7YBL006C COS5P47187 383 aa7.33□□□□□ -1.24
LDB7YBL006C MFB1Q04922 465 aa7.33□□□□□ -1.24
LDB7YBL006C HOM2P13663 365 aaKnown RBP7.32□□□□□ -1.24
LDB7YBL006C YIL161WP40449 235 aaKnown RBP7.32□□□□□ -1.24
LDB7YBL006C EBS1Q03466 884 aaKnown RBP7.32□□□□□ -1.24
LDB7YBL006C YLR297WQ05899 129 aa7.32□□□□□ -1.24
LDB7YBL006C CSR1Q06705 408 aaKnown RBP7.32□□□□□ -1.24
LDB7YBL006C DDC1Q08949 612 aa7.32□□□□□ -1.24
LDB7YBL006C YBL029C-AQ3E756 94 aa7.32□□□□□ -1.24
LDB7YBL006C REV1P12689 985 aa7.31□□□□□ -1.24
LDB7YBL006C LRE1P25579 583 aaKnown RBP7.31□□□□□ -1.24
LDB7YBL006C APL1P27351 700 aa7.31□□□□□ -1.24
LDB7YBL006C GPI10P30777 616 aa7.31□□□□□ -1.24
LDB7YBL006C SPT23P35210 1082 aa7.31□□□□□ -1.24
LDB7YBL006C RPC25P35718 212 aa7.31□□□□□ -1.24
LDB7YBL006C EFM2P38347 419 aa7.31□□□□□ -1.24
LDB7YBL006C FMO1P38866 432 aa7.31□□□□□ -1.24
LDB7YBL006C DOT6P40059 670 aaKnown RBP7.31□□□□□ -1.24
LDB7YBL006C RMD8P43620 662 aa7.31□□□□□ -1.24
LDB7YBL006C RSM26P47141 266 aa7.31□□□□□ -1.24
LDB7YBL006C VPS70P47161 811 aa7.31□□□□□ -1.24
LDB7YBL006C CAF120P53836 1060 aa7.31□□□□□ -1.24
LDB7YBL006C UBP3Q01477 912 aaKnown RBP RIP-Chip data7.31□□□□□ -1.24not detected
LDB7YBL006C MTD1Q02046 320 aaKnown RBP7.31□□□□□ -1.24
LDB7YBL006C YPL062WQ02781 134 aa7.31□□□□□ -1.24
LDB7YBL006C YML053CQ04978 212 aa7.31□□□□□ -1.24
LDB7YBL006C YPR084WQ06821 456 aa7.31□□□□□ -1.24
LDB7YBL006C RCL1Q08096 367 aaPredicted RBP7.31□□□□□ -1.24
LDB7YBL006C FLC1Q08967 793 aa7.31□□□□□ -1.24
LDB7YBL006C AIM44Q99299 758 aa7.31□□□□□ -1.24
LDB7YBL006C IRA1P18963 3092 aa7.31□□□□□ -1.24
LDB7YBL006C CET1O13297 549 aaPredicted RBP7.3□□□□□ -1.24
LDB7YBL006C DAL2P25335 343 aa7.3□□□□□ -1.24
LDB7YBL006C MRC1P25588 1096 aa7.3□□□□□ -1.24
LDB7YBL006C MSH2P25847 964 aa7.3□□□□□ -1.24
LDB7YBL006C NOP4P37838 685 aaKnown RBP7.3□□□□□ -1.24
LDB7YBL006C YMC2P38087 329 aa7.3□□□□□ -1.24
LDB7YBL006C CDC1P40986 491 aa7.3□□□□□ -1.24
LDB7YBL006C ASG7P46993 209 aa7.3□□□□□ -1.24
LDB7YBL006C YGL036WP53185 909 aaPredicted RBP7.3□□□□□ -1.24
LDB7YBL006C CWC24P53769 259 aa7.3□□□□□ -1.24
LDB7YBL006C NIS1P53939 407 aa7.3□□□□□ -1.24
LDB7YBL006C IMP4P53941 290 aaKnown RBP7.3□□□□□ -1.24
Retrieved 100 of 5,963 RNA–protein pairs in 68.1 ms