RNA–Protein interactions for RNA: ENST00000640072.1

NECAP1-222, Transcript of NECAP endocytosis associated 1, humanhuman

TSL 5

Gene NECAP1, Length 3,456 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAP1-222ENST00000640072 FNBP4Q8N3X1 1017 aaPredicted RBP7.04□□□□□ -1.28
NECAP1-222ENST00000640072 USP33Q8TEY7 942 aa7.04□□□□□ -1.28
NECAP1-222ENST00000640072 RUNDC1Q96C34 613 aa7.04□□□□□ -1.28
NECAP1-222ENST00000640072 FBXL5Q9UKA1 691 aa7.04□□□□□ -1.28
NECAP1-222ENST00000640072 USTQ9Y2C2 406 aa7.04□□□□□ -1.28
NECAP1-222ENST00000640072 TAGLNQ01995 201 aaKnown RBP7.04□□□□□ -1.28
NECAP1-222ENST00000640072 POU5F1BQ06416 359 aa7.04□□□□□ -1.28
NECAP1-222ENST00000640072 KIAA0825Q8IV33 1275 aa7.04□□□□□ -1.28
NECAP1-222ENST00000640072 PARP9Q8IXQ6 854 aa7.04□□□□□ -1.28
NECAP1-222ENST00000640072 N4BP2L2Q92802 583 aaPredicted RBP7.04□□□□□ -1.28
NECAP1-222ENST00000640072 CDCA7LQ96GN5 454 aa7.04□□□□□ -1.28
NECAP1-222ENST00000640072 GSDMAQ96QA5 445 aa7.04□□□□□ -1.28
NECAP1-222ENST00000640072 PDRG1Q9NUG6 133 aa7.04□□□□□ -1.28
NECAP1-222ENST00000640072 DCAF16Q9NXF7 216 aa7.04□□□□□ -1.28
NECAP1-222ENST00000640072 ATP8A1Q9Y2Q0 1164 aa7.04□□□□□ -1.28
NECAP1-222ENST00000640072 GRXCR2A6NFK2 248 aa7.04□□□□□ -1.28
NECAP1-222ENST00000640072 AP1G2O75843 785 aa7.04□□□□□ -1.28
NECAP1-222ENST00000640072 OAS2P29728 719 aaKnown RBP7.04□□□□□ -1.28
NECAP1-222ENST00000640072 ELF1P32519 619 aa7.04□□□□□ -1.28
NECAP1-222ENST00000640072 CCDC158Q5M9N0 1113 aa7.04□□□□□ -1.28
NECAP1-222ENST00000640072 HOOK3Q86VS8 718 aa7.04□□□□□ -1.28
NECAP1-222ENST00000640072 CHPFQ8IZ52 775 aa7.04□□□□□ -1.28
NECAP1-222ENST00000640072 DRAXINQ8NBI3 349 aaPredicted RBP7.04□□□□□ -1.28
NECAP1-222ENST00000640072 CTCFLQ8NI51 663 aaPredicted RBP7.04□□□□□ -1.28
NECAP1-222ENST00000640072 JPH2Q9BR39 696 aaPredicted RBP7.04□□□□□ -1.28
NECAP1-222ENST00000640072 TACO1Q9BSH4 297 aaKnown RBP7.04□□□□□ -1.28
NECAP1-222ENST00000640072 FAM107BQ9H098 131 aa7.04□□□□□ -1.28
NECAP1-222ENST00000640072 QTRT2Q9H974 415 aaKnown RBP7.04□□□□□ -1.28
NECAP1-222ENST00000640072 PCDH12Q9NPG4 1184 aa7.04□□□□□ -1.28
NECAP1-222ENST00000640072 RAD50Q92878 1312 aa7.04□□□□□ -1.28
NECAP1-222ENST00000640072 RNF187Q5TA31 235 aaPredicted RBP7.03□□□□□ -1.28
NECAP1-222ENST00000640072 TMCO5AQ8N6Q1 288 aa7.03□□□□□ -1.28
NECAP1-222ENST00000640072 SMARCE1Q969G3 411 aa7.03□□□□□ -1.28
NECAP1-222ENST00000640072 CCDC102AQ96A19 550 aa7.03□□□□□ -1.28
NECAP1-222ENST00000640072 DDX11Q96FC9 970 aa7.03□□□□□ -1.28
NECAP1-222ENST00000640072 SH3GL1Q99961 368 aa7.03□□□□□ -1.28
NECAP1-222ENST00000640072 CCDC88BA6NC98 1476 aa7.03□□□□□ -1.28
NECAP1-222ENST00000640072 E2F6O75461 281 aa7.03□□□□□ -1.28
NECAP1-222ENST00000640072 ACTN2P35609 894 aa7.03□□□□□ -1.28
NECAP1-222ENST00000640072 TAF11Q15544 211 aa7.03□□□□□ -1.28
NECAP1-222ENST00000640072 PTPN14Q15678 1187 aa7.03□□□□□ -1.28
NECAP1-222ENST00000640072 ELF2Q15723 593 aa7.03□□□□□ -1.28
NECAP1-222ENST00000640072 NBPF8Q3BBV2 869 aa7.03□□□□□ -1.28
NECAP1-222ENST00000640072 FBXO38Q6PIJ6 1188 aa7.03□□□□□ -1.28
NECAP1-222ENST00000640072 BTN2A1Q7KYR7 527 aa7.03□□□□□ -1.28
NECAP1-222ENST00000640072 KIF1BPQ96EK5 621 aa7.03□□□□□ -1.28
NECAP1-222ENST00000640072 LRRCC1Q9C099 1032 aa7.03□□□□□ -1.28
NECAP1-222ENST00000640072 COG6Q9Y2V7 657 aa7.03□□□□□ -1.28
NECAP1-222ENST00000640072 TMEM98Q9Y2Y6 226 aa7.03□□□□□ -1.28
NECAP1-222ENST00000640072 CEP164Q9UPV0 1460 aa7.03□□□□□ -1.28
NECAP1-222ENST00000640072 MBD3O95983 291 aa7.03□□□□□ -1.28
NECAP1-222ENST00000640072 RLBP1P12271 317 aa7.03□□□□□ -1.28
NECAP1-222ENST00000640072 CLNS1AP54105 237 aaKnown RBP7.03□□□□□ -1.28
NECAP1-222ENST00000640072 RBM6P78332 1123 aaKnown RBP7.03□□□□□ -1.28
NECAP1-222ENST00000640072 SIM2Q14190 667 aaPredicted RBP7.03□□□□□ -1.28
NECAP1-222ENST00000640072 SKIDA1Q1XH10 827 aa7.03□□□□□ -1.28
NECAP1-222ENST00000640072 NUTM1Q86Y26 1132 aa7.03□□□□□ -1.28
NECAP1-222ENST00000640072 ERC1Q8IUD2 1116 aa7.03□□□□□ -1.28
NECAP1-222ENST00000640072 SNUPNO95149 360 aaKnown RBP7.02□□□□□ -1.29
NECAP1-222ENST00000640072 DMPKQ09013 629 aa7.02□□□□□ -1.29
NECAP1-222ENST00000640072 MRPL28Q13084 256 aaKnown RBP7.02□□□□□ -1.29
NECAP1-222ENST00000640072 KIAA1328Q86T90 577 aa7.02□□□□□ -1.29
NECAP1-222ENST00000640072 PEX5LQ8IYB4 626 aa7.02□□□□□ -1.29
NECAP1-222ENST00000640072 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP7.02□□□□□ -1.292e-6■■■■■ 29
NECAP1-222ENST00000640072 NACC2Q96BF6 587 aa7.02□□□□□ -1.29
NECAP1-222ENST00000640072 IER2Q9BTL4 223 aa7.02□□□□□ -1.29
NECAP1-222ENST00000640072 ABCG4Q9H172 646 aa7.02□□□□□ -1.29
NECAP1-222ENST00000640072 MRPL42Q9Y6G3 142 aaKnown RBP7.02□□□□□ -1.29
NECAP1-222ENST00000640072 PLEKHG2Q9H7P9 1386 aa7.02□□□□□ -1.29
NECAP1-222ENST00000640072 ANKRD65E5RJM6 399 aa7.02□□□□□ -1.29
NECAP1-222ENST00000640072 ERLIN2O94905 339 aa7.02□□□□□ -1.29
NECAP1-222ENST00000640072 ZBTB17Q13105 803 aa7.02□□□□□ -1.29
NECAP1-222ENST00000640072 UBE4AQ14139 1066 aa7.02□□□□□ -1.29
NECAP1-222ENST00000640072 KRT77Q7Z794 578 aa7.02□□□□□ -1.29
NECAP1-222ENST00000640072 GSDMBQ8TAX9 411 aa7.02□□□□□ -1.29
NECAP1-222ENST00000640072 KIAA1524Q8TCG1 905 aa7.02□□□□□ -1.29
NECAP1-222ENST00000640072 EPAS1Q99814 870 aa7.02□□□□□ -1.29
NECAP1-222ENST00000640072 STK31Q9BXU1 1019 aa7.02□□□□□ -1.29
NECAP1-222ENST00000640072 ZNF304Q9HCX3 659 aa7.02□□□□□ -1.29
NECAP1-222ENST00000640072 GPCPD1Q9NPB8 672 aa7.02□□□□□ -1.29
NECAP1-222ENST00000640072 DDX56Q9NY93 547 aaKnown RBP7.02□□□□□ -1.29
NECAP1-222ENST00000640072 PPP1R9AQ9ULJ8 1098 aa7.02□□□□□ -1.29
NECAP1-222ENST00000640072 TBX22Q9Y458 520 aa7.02□□□□□ -1.29
NECAP1-222ENST00000640072 CFAP65Q6ZU64 1925 aaKnown RBP7.02□□□□□ -1.29
NECAP1-222ENST00000640072 VPS8Q8N3P4 1428 aa7.02□□□□□ -1.29
NECAP1-222ENST00000640072 ROCK2O75116 1388 aaKnown RBP7.02□□□□□ -1.29
NECAP1-222ENST00000640072 CCNB3Q8WWL7 1395 aa7.02□□□□□ -1.29
NECAP1-222ENST00000640072 INPP5BP32019 993 aa7.02□□□□□ -1.29
NECAP1-222ENST00000640072 TRAPPC10P48553 1259 aa7.02□□□□□ -1.29
NECAP1-222ENST00000640072 ST5P78524 1137 aa7.02□□□□□ -1.29
NECAP1-222ENST00000640072 IQCB1Q15051 598 aa7.02□□□□□ -1.29
NECAP1-222ENST00000640072 RCN1Q15293 331 aa7.02□□□□□ -1.29
NECAP1-222ENST00000640072 CCDC152Q4G0S7 254 aa7.02□□□□□ -1.29
NECAP1-222ENST00000640072 JAZF1Q86VZ6 243 aa7.02□□□□□ -1.29
NECAP1-222ENST00000640072 RAVER1Q8IY67 606 aaKnown RBP7.02□□□□□ -1.29
NECAP1-222ENST00000640072 IPCEF1Q8WWN9 437 aaPredicted RBP7.02□□□□□ -1.29
NECAP1-222ENST00000640072 SNX21Q969T3 373 aa7.02□□□□□ -1.29
NECAP1-222ENST00000640072 TMEM87BQ96K49 555 aa7.02□□□□□ -1.29
NECAP1-222ENST00000640072 POLG2Q9UHN1 485 aa7.02□□□□□ -1.29
NECAP1-222ENST00000640072 ACAD8Q9UKU7 415 aa7.02□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms