RNA–Protein interactions for RNA: ENST00000636640.1

SYNGAP1-216, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5

Gene SYNGAP1, Length 118 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-216ENST00000636640 ABHD8Q96I13 439 aa2.09□□□□□ -2.07
SYNGAP1-216ENST00000636640 KAZALD1Q96I82 304 aa2.09□□□□□ -2.07
SYNGAP1-216ENST00000636640 CSRNP1Q96S65 589 aa2.09□□□□□ -2.07
SYNGAP1-216ENST00000636640 METTL22Q9BUU2 404 aaPredicted RBP2.09□□□□□ -2.07
SYNGAP1-216ENST00000636640 BCL2L13Q9BXK5 485 aa2.09□□□□□ -2.07
SYNGAP1-216ENST00000636640 PUS3Q9BZE2 481 aaKnown RBP2.09□□□□□ -2.07
SYNGAP1-216ENST00000636640 PRDM10Q9NQV6 1147 aa2.09□□□□□ -2.07
SYNGAP1-216ENST00000636640 ADARB2Q9NS39 739 aaKnown RBP2.09□□□□□ -2.07
SYNGAP1-216ENST00000636640 IFT57Q9NWB7 429 aa2.09□□□□□ -2.07
SYNGAP1-216ENST00000636640 BABAM1Q9NWV8 329 aa2.09□□□□□ -2.07
SYNGAP1-216ENST00000636640 HYPKQ9NX55 129 aa2.09□□□□□ -2.07
SYNGAP1-216ENST00000636640 DBF4Q9UBU7 674 aaPredicted RBP2.09□□□□□ -2.07
SYNGAP1-216ENST00000636640 TNNQ9UQP3 1299 aa2.09□□□□□ -2.07
SYNGAP1-216ENST00000636640 CDHR2Q9BYE9 1310 aa2.09□□□□□ -2.08
SYNGAP1-216ENST00000636640 FANCIQ9NVI1 1328 aa2.09□□□□□ -2.08
SYNGAP1-216ENST00000636640 KIAA1217Q5T5P2 1943 aa2.09□□□□□ -2.08
SYNGAP1-216ENST00000636640 TRIP12Q14669 1992 aaPredicted RBP2.09□□□□□ -2.08
SYNGAP1-216ENST00000636640 REV3LO60673 3130 aa2.08□□□□□ -2.08
SYNGAP1-216ENST00000636640 COL1A1P02452 1464 aaPredicted RBP2.08□□□□□ -2.08
SYNGAP1-216ENST00000636640 MKI67P46013 3256 aaKnown RBP2.08□□□□□ -2.08
SYNGAP1-216ENST00000636640 LAMA4Q16363 1823 aa2.08□□□□□ -2.08
SYNGAP1-216ENST00000636640 ZNF236Q9UL36 1845 aa2.08□□□□□ -2.08
SYNGAP1-216ENST00000636640 MYO9BQ13459 2157 aa2.08□□□□□ -2.08
SYNGAP1-216ENST00000636640 CCDC85CA6NKD9 419 aa2.08□□□□□ -2.08
SYNGAP1-216ENST00000636640 PLIN1O60240 522 aa2.08□□□□□ -2.08
SYNGAP1-216ENST00000636640 PDE8AO60658 829 aa2.08□□□□□ -2.08
SYNGAP1-216ENST00000636640 TRPA1O75762 1119 aa2.08□□□□□ -2.08
SYNGAP1-216ENST00000636640 TBC1D8O95759 1140 aa2.08□□□□□ -2.08
SYNGAP1-216ENST00000636640 SLC4A2P04920 1241 aa2.08□□□□□ -2.08
SYNGAP1-216ENST00000636640 CSF1RP07333 972 aa2.08□□□□□ -2.08
SYNGAP1-216ENST00000636640 LMOD1P29536 600 aaPredicted RBP2.08□□□□□ -2.08
SYNGAP1-216ENST00000636640 GJA5P36382 358 aa2.08□□□□□ -2.08
SYNGAP1-216ENST00000636640 CTCFP49711 727 aaPredicted RBP2.08□□□□□ -2.08
SYNGAP1-216ENST00000636640 CCT4P50991 539 aaKnown RBP2.08□□□□□ -2.08
SYNGAP1-216ENST00000636640 CTSWP56202 376 aa2.08□□□□□ -2.08
SYNGAP1-216ENST00000636640 HUNKP57058 714 aa2.08□□□□□ -2.08
SYNGAP1-216ENST00000636640 ZNF280AP59817 542 aaPredicted RBP2.08□□□□□ -2.08
SYNGAP1-216ENST00000636640 GNAI1P63096 354 aa2.08□□□□□ -2.08
SYNGAP1-216ENST00000636640 PTPN12Q05209 780 aaKnown RBP2.08□□□□□ -2.08
SYNGAP1-216ENST00000636640 LMOD3Q0VAK6 560 aa2.08□□□□□ -2.08
SYNGAP1-216ENST00000636640 SCARF1Q14162 830 aa2.08□□□□□ -2.08
SYNGAP1-216ENST00000636640 GCKRQ14397 625 aa2.08□□□□□ -2.08
SYNGAP1-216ENST00000636640 KIF4BQ2VIQ3 1234 aa2.08□□□□□ -2.08
SYNGAP1-216ENST00000636640 TWISTNBQ3B726 338 aaPredicted RBP2.08□□□□□ -2.08
SYNGAP1-216ENST00000636640 HSP90AB3PQ58FF7 597 aa2.08□□□□□ -2.08
SYNGAP1-216ENST00000636640 DACT2Q5SW24 774 aa2.08□□□□□ -2.08
SYNGAP1-216ENST00000636640 ANGEL2Q5VTE6 544 aaKnown RBP2.08□□□□□ -2.08
SYNGAP1-216ENST00000636640 RSBN1LQ6PCB5 846 aaPredicted RBP2.08□□□□□ -2.08
SYNGAP1-216ENST00000636640 KSR2Q6VAB6 950 aa2.08□□□□□ -2.08
SYNGAP1-216ENST00000636640 KRT26Q7Z3Y9 468 aa2.08□□□□□ -2.08
SYNGAP1-216ENST00000636640 PNMA8AQ86V59 439 aaPredicted RBP2.08□□□□□ -2.08
SYNGAP1-216ENST00000636640 RASAL3Q86YV0 1011 aa2.08□□□□□ -2.08
SYNGAP1-216ENST00000636640 FAM9BQ8IZU0 186 aa2.08□□□□□ -2.08
SYNGAP1-216ENST00000636640 CCDC191Q8NCU4 936 aa2.08□□□□□ -2.08
SYNGAP1-216ENST00000636640 KLHDC4Q8TBB5 520 aa2.08□□□□□ -2.08
SYNGAP1-216ENST00000636640 CNKSR2Q8WXI2 1034 aa2.08□□□□□ -2.08
SYNGAP1-216ENST00000636640 FBXW7Q969H0 707 aa2.08□□□□□ -2.08
SYNGAP1-216ENST00000636640 CDCA7LQ96GN5 454 aa2.08□□□□□ -2.08
SYNGAP1-216ENST00000636640 SUCLG2Q96I99 432 aa2.08□□□□□ -2.08
SYNGAP1-216ENST00000636640 ZBED3Q96IU2 234 aaPredicted RBP2.08□□□□□ -2.08
SYNGAP1-216ENST00000636640 CLMNQ96JQ2 1002 aa2.08□□□□□ -2.08
SYNGAP1-216ENST00000636640 MCOLN1Q9GZU1 580 aa2.08□□□□□ -2.08
SYNGAP1-216ENST00000636640 PNNQ9H307 717 aaKnown RBP2.08□□□□□ -2.08
SYNGAP1-216ENST00000636640 CWC25Q9NXE8 425 aaPredicted RBP2.08□□□□□ -2.08
SYNGAP1-216ENST00000636640 GGA3Q9NZ52 723 aa2.08□□□□□ -2.08
SYNGAP1-216ENST00000636640 PODXL2Q9NZ53 605 aa2.08□□□□□ -2.08
SYNGAP1-216ENST00000636640 PCDH10Q9P2E7 1040 aa2.08□□□□□ -2.08
SYNGAP1-216ENST00000636640 MINPP1Q9UNW1 487 aa2.08□□□□□ -2.08
SYNGAP1-216ENST00000636640 IQSEC3Q9UPP2 1182 aaPredicted RBP2.08□□□□□ -2.08
SYNGAP1-216ENST00000636640 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP2.08□□□□□ -2.08
SYNGAP1-216ENST00000636640 PTPRSQ13332 1948 aa2.08□□□□□ -2.08
SYNGAP1-216ENST00000636640 ZNF609O15014 1411 aa2.08□□□□□ -2.08
SYNGAP1-216ENST00000636640 LTBP2Q14767 1821 aa2.07□□□□□ -2.08
SYNGAP1-216ENST00000636640 BRCA2P51587 3418 aa2.07□□□□□ -2.08
SYNGAP1-216ENST00000636640 ATG2AQ2TAZ0 1938 aa2.07□□□□□ -2.08
SYNGAP1-216ENST00000636640 GREB1LQ9C091 1923 aaPredicted RBP2.07□□□□□ -2.08
SYNGAP1-216ENST00000636640 TRIOBPQ9H2D6 2365 aa2.07□□□□□ -2.08
SYNGAP1-216ENST00000636640 SCN5AQ14524 2016 aa2.07□□□□□ -2.08
SYNGAP1-216ENST00000636640 CLRN2A0PK11 232 aa2.07□□□□□ -2.08
SYNGAP1-216ENST00000636640 F8W031 263 aaPredicted RBP2.07□□□□□ -2.08
SYNGAP1-216ENST00000636640 H7C1D1 291 aa2.07□□□□□ -2.08
SYNGAP1-216ENST00000636640 WNT10BO00744 389 aa2.07□□□□□ -2.08
SYNGAP1-216ENST00000636640 ECM2O94769 699 aaPredicted RBP2.07□□□□□ -2.08
SYNGAP1-216ENST00000636640 SLC10A3P09131 477 aa2.07□□□□□ -2.08
SYNGAP1-216ENST00000636640 HOXB7P09629 217 aa2.07□□□□□ -2.08
SYNGAP1-216ENST00000636640 NBPF7P0C2Y1 421 aaPredicted RBP2.07□□□□□ -2.08
SYNGAP1-216ENST00000636640 ITGA6P23229 1130 aa2.07□□□□□ -2.08
SYNGAP1-216ENST00000636640 GYG1P46976 350 aa2.07□□□□□ -2.08
SYNGAP1-216ENST00000636640 ZNF157P51786 506 aaPredicted RBP2.07□□□□□ -2.08
SYNGAP1-216ENST00000636640 CACNB3P54284 484 aa2.07□□□□□ -2.08
SYNGAP1-216ENST00000636640 SOX10P56693 466 aa2.07□□□□□ -2.08
SYNGAP1-216ENST00000636640 GTF2IP78347 998 aa2.07□□□□□ -2.08
SYNGAP1-216ENST00000636640 CHRNDQ07001 517 aa2.07□□□□□ -2.08
SYNGAP1-216ENST00000636640 GOLGA2Q08379 1002 aa2.07□□□□□ -2.08
SYNGAP1-216ENST00000636640 FLIIQ13045 1269 aa2.07□□□□□ -2.08
SYNGAP1-216ENST00000636640 FKBP5Q13451 457 aaPredicted RBP2.07□□□□□ -2.08
SYNGAP1-216ENST00000636640 DGKZQ13574 1117 aa2.07□□□□□ -2.08
SYNGAP1-216ENST00000636640 TNIP1Q15025 636 aa2.07□□□□□ -2.08
SYNGAP1-216ENST00000636640 LRRC24Q50LG9 513 aa2.07□□□□□ -2.08
SYNGAP1-216ENST00000636640 BEND3Q5T5X7 828 aa2.07□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms