RNA–Protein interactions for RNA: ENST00000627620.2

SCN8A-209, Transcript of sodium voltage-gated channel alpha subunit 8, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCN8A, Length 5,943 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN8A-209ENST00000627620 MAGEB6Q8N7X4 407 aa14.59□□□□□ -0.07
SCN8A-209ENST00000627620 DNAJC25Q9H1X3 360 aa14.59□□□□□ -0.07
SCN8A-209ENST00000627620 DCTPP1Q9H773 170 aa14.59□□□□□ -0.07
SCN8A-209ENST00000627620 TOM1O60784 492 aa14.58□□□□□ -0.07
SCN8A-209ENST00000627620 SKILP12757 684 aa14.58□□□□□ -0.07
SCN8A-209ENST00000627620 ZNF830Q96NB3 372 aaPredicted RBP14.58□□□□□ -0.07
SCN8A-209ENST00000627620 MCM9Q9NXL9 1143 aa14.58□□□□□ -0.07
SCN8A-209ENST00000627620 TNNQ9UQP3 1299 aa14.58□□□□□ -0.07
SCN8A-209ENST00000627620 A2MP01023 1474 aa14.58□□□□□ -0.07
SCN8A-209ENST00000627620 RTL9Q8NET4 1388 aa14.58□□□□□ -0.08
SCN8A-209ENST00000627620 SYNCQ9H7C4 482 aa14.58□□□□□ -0.08
SCN8A-209ENST00000627620 HOMER2Q9NSB8 354 aa14.58□□□□□ -0.08
SCN8A-209ENST00000627620 MAP3K5Q99683 1374 aa14.58□□□□□ -0.08
SCN8A-209ENST00000627620 KRT24Q2M2I5 525 aa14.58□□□□□ -0.08
SCN8A-209ENST00000627620 SNX21Q969T3 373 aa14.58□□□□□ -0.08
SCN8A-209ENST00000627620 UBAP1LF5GYI3 381 aa14.58□□□□□ -0.08
SCN8A-209ENST00000627620 PHACTR2O75167 634 aa14.57□□□□□ -0.08
SCN8A-209ENST00000627620 NF2P35240 595 aa14.57□□□□□ -0.08
SCN8A-209ENST00000627620 PPM1FP49593 454 aaPredicted RBP14.57□□□□□ -0.08
SCN8A-209ENST00000627620 APOBRQ0VD83 1088 aa14.57□□□□□ -0.08
SCN8A-209ENST00000627620 CREB3L3Q68CJ9 461 aa14.57□□□□□ -0.08
SCN8A-209ENST00000627620 CCDC186Q7Z3E2 898 aa14.57□□□□□ -0.08
SCN8A-209ENST00000627620 RRP36Q96EU6 259 aaKnown RBP14.57□□□□□ -0.08
SCN8A-209ENST00000627620 ZC3H12CQ9C0D7 883 aaKnown RBP14.57□□□□□ -0.08
SCN8A-209ENST00000627620 RTL1A6NKG5 1358 aa14.57□□□□□ -0.08
SCN8A-209ENST00000627620 PRAG1Q86YV5 1406 aa14.57□□□□□ -0.08
SCN8A-209ENST00000627620 CALML3P27482 149 aa14.57□□□□□ -0.08
SCN8A-209ENST00000627620 AK2P54819 239 aa14.57□□□□□ -0.08
SCN8A-209ENST00000627620 PLVAPQ9BX97 442 aa14.57□□□□□ -0.08
SCN8A-209ENST00000627620 NSFL1CQ9UNZ2 370 aaKnown RBP14.57□□□□□ -0.08
SCN8A-209ENST00000627620 CKAP4Q07065 602 aaKnown RBP14.57□□□□□ -0.08
SCN8A-209ENST00000627620 DCAF5Q96JK2 942 aa14.57□□□□□ -0.08
SCN8A-209ENST00000627620 PARD3Q8TEW0 1356 aa14.56□□□□□ -0.08
SCN8A-209ENST00000627620 EYA1Q99502 592 aa14.56□□□□□ -0.08
SCN8A-209ENST00000627620 RTCBQ9Y3I0 505 aaKnown RBP14.56□□□□□ -0.08
SCN8A-209ENST00000627620 PLCG2P16885 1265 aa14.56□□□□□ -0.08
SCN8A-209ENST00000627620 KRT2P35908 639 aa14.56□□□□□ -0.08
SCN8A-209ENST00000627620 VEZTQ9HBM0 779 aa14.56□□□□□ -0.08
SCN8A-209ENST00000627620 RNF216Q9NWF9 866 aaPredicted RBP14.56□□□□□ -0.08
SCN8A-209ENST00000627620 SPDYE3A6NKU9 549 aa14.56□□□□□ -0.08
SCN8A-209ENST00000627620 LMAN1P49257 510 aa14.56□□□□□ -0.08
SCN8A-209ENST00000627620 NPATQ14207 1427 aa14.56□□□□□ -0.08
SCN8A-209ENST00000627620 BMS1Q14692 1282 aaKnown RBP14.56□□□□□ -0.08
SCN8A-209ENST00000627620 KRT79Q5XKE5 535 aa14.56□□□□□ -0.08
SCN8A-209ENST00000627620 CEP112Q8N8E3 955 aa14.56□□□□□ -0.08
SCN8A-209ENST00000627620 PTGS1P23219 599 aa14.56□□□□□ -0.08
SCN8A-209ENST00000627620 IKBKGQ9Y6K9 419 aa14.56□□□□□ -0.08
SCN8A-209ENST00000627620 GTF2F1P35269 517 aaKnown RBP eCLIP14.55□□□□□ -0.08
SCN8A-209ENST00000627620 TNNI2P48788 182 aa14.55□□□□□ -0.08
SCN8A-209ENST00000627620 BBXQ8WY36 941 aaPredicted RBP14.55□□□□□ -0.08
SCN8A-209ENST00000627620 PHACTR3Q96KR7 559 aa14.55□□□□□ -0.08
SCN8A-209ENST00000627620 PRIMPOLQ96LW4 560 aa14.55□□□□□ -0.08
SCN8A-209ENST00000627620 DNAI1Q9UI46 699 aa14.55□□□□□ -0.08
SCN8A-209ENST00000627620 RLBP1P12271 317 aa14.55□□□□□ -0.08
SCN8A-209ENST00000627620 MRVI1Q9Y6F6 885 aa14.55□□□□□ -0.08
SCN8A-209ENST00000627620 CTAGE15A4D2H0 777 aa14.55□□□□□ -0.08
SCN8A-209ENST00000627620 CTAGE8P0CG41 777 aa14.55□□□□□ -0.08
SCN8A-209ENST00000627620 CTAGE6Q86UF2 777 aa14.55□□□□□ -0.08
SCN8A-209ENST00000627620 CTAGE4Q8IX94 777 aa14.55□□□□□ -0.08
SCN8A-209ENST00000627620 HSF2BPO75031 334 aa14.55□□□□□ -0.08
SCN8A-209ENST00000627620 GCP02774 474 aa14.55□□□□□ -0.08
SCN8A-209ENST00000627620 DHX32Q7L7V1 743 aaKnown RBP14.55□□□□□ -0.08
SCN8A-209ENST00000627620 RGS22Q8NE09 1264 aa14.55□□□□□ -0.08
SCN8A-209ENST00000627620 BICC1Q9H694 974 aaKnown RBP14.55□□□□□ -0.08
SCN8A-209ENST00000627620 ASXL2Q76L83 1435 aa14.55□□□□□ -0.08
SCN8A-209ENST00000627620 SYT1P21579 422 aa14.54□□□□□ -0.08
SCN8A-209ENST00000627620 PTPDC1A2A3K4 754 aa14.54□□□□□ -0.08
SCN8A-209ENST00000627620 C8orf34Q49A92 452 aa14.54□□□□□ -0.08
SCN8A-209ENST00000627620 ANKRD2Q9GZV1 360 aa14.54□□□□□ -0.08
SCN8A-209ENST00000627620 WDR7Q9Y4E6 1490 aa14.54□□□□□ -0.08
SCN8A-209ENST00000627620 SOS1Q07889 1333 aaPredicted RBP14.54□□□□□ -0.08
SCN8A-209ENST00000627620 GIMAP7Q8NHV1 300 aa14.54□□□□□ -0.08
SCN8A-209ENST00000627620 ATP10BO94823 1461 aa14.54□□□□□ -0.08
SCN8A-209ENST00000627620 RNMTO43148 476 aaKnown RBP14.54□□□□□ -0.08
SCN8A-209ENST00000627620 LDHBP07195 334 aaKnown RBP14.54□□□□□ -0.08
SCN8A-209ENST00000627620 LMOD1P29536 600 aaPredicted RBP14.54□□□□□ -0.08
SCN8A-209ENST00000627620 GIGYF2Q6Y7W6 1299 aaKnown RBP14.54□□□□□ -0.08
SCN8A-209ENST00000627620 TCHPQ9BT92 498 aa14.54□□□□□ -0.08
SCN8A-209ENST00000627620 MCM7P33993 719 aa14.54□□□□□ -0.08
SCN8A-209ENST00000627620 SPECC1LQ69YQ0 1117 aa14.54□□□□□ -0.08
SCN8A-209ENST00000627620 RUFY3Q7L099 469 aa14.54□□□□□ -0.08
SCN8A-209ENST00000627620 TSNARE1Q96NA8 513 aa14.54□□□□□ -0.08
SCN8A-209ENST00000627620 C19orf44Q9H6X5 657 aa14.54□□□□□ -0.08
SCN8A-209ENST00000627620 SYCP2Q9BX26 1530 aa14.54□□□□□ -0.08
SCN8A-209ENST00000627620 PUS7Q96PZ0 661 aaKnown RBP14.53□□□□□ -0.08
SCN8A-209ENST00000627620 SELENOOQ9BVL4 669 aa14.53□□□□□ -0.08
SCN8A-209ENST00000627620 FAM107BQ9H098 131 aa14.53□□□□□ -0.08
SCN8A-209ENST00000627620 ZBTB40Q9NUA8 1239 aa14.53□□□□□ -0.08
SCN8A-209ENST00000627620 PTPRKQ15262 1439 aa14.53□□□□□ -0.08
SCN8A-209ENST00000627620 RAPGEF6Q8TEU7 1601 aa14.53□□□□□ -0.08
SCN8A-209ENST00000627620 RIMBP2O15034 1052 aa14.53□□□□□ -0.08
SCN8A-209ENST00000627620 RXRAP19793 462 aa14.53□□□□□ -0.08
SCN8A-209ENST00000627620 ARID5AQ03989 594 aa14.53□□□□□ -0.08
SCN8A-209ENST00000627620 PLS1Q14651 629 aa14.53□□□□□ -0.08
SCN8A-209ENST00000627620 NOLC1Q14978 699 aaKnown RBP eCLIP14.53□□□□□ -0.08
SCN8A-209ENST00000627620 PLEKHM2Q8IWE5 1019 aa14.53□□□□□ -0.08
SCN8A-209ENST00000627620 PKNOX2Q96KN3 472 aa14.53□□□□□ -0.08
SCN8A-209ENST00000627620 HOXC9P31274 260 aa14.53□□□□□ -0.08
SCN8A-209ENST00000627620 CCDC155Q8N6L0 562 aa14.53□□□□□ -0.08
SCN8A-209ENST00000627620 PSMD1Q99460 953 aa14.53□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms