RNA–Protein interactions for RNA: ENST00000627450.2

PDXDC1-218, Transcript of pyridoxal dependent decarboxylase domain containing 1, humanhuman

TSL 2 BASIC

Gene PDXDC1, Length 2,683 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDXDC1-218ENST00000627450 TXNRD3Q86VQ6 643 aa16.35■□□□□ 0.21
PDXDC1-218ENST00000627450 UPF1Q92900 1129 aaKnown RBP eCLIP16.35■□□□□ 0.212e-8■■■□□ 15.9
PDXDC1-218ENST00000627450 SEC62Q99442 399 aaKnown RBP16.35■□□□□ 0.21
PDXDC1-218ENST00000627450 SRGNP10124 158 aa16.34■□□□□ 0.21
PDXDC1-218ENST00000627450 KCNJ4P48050 445 aa16.34■□□□□ 0.21
PDXDC1-218ENST00000627450 RASGRF1Q13972 1273 aa16.34■□□□□ 0.21
PDXDC1-218ENST00000627450 KBTBD3Q8NAB2 608 aa16.34■□□□□ 0.21
PDXDC1-218ENST00000627450 ZBTB7AO95365 584 aa16.34■□□□□ 0.21
PDXDC1-218ENST00000627450 REC8O95072 547 aa16.33■□□□□ 0.21
PDXDC1-218ENST00000627450 CYP2E1P05181 493 aaPredicted RBP16.33■□□□□ 0.21
PDXDC1-218ENST00000627450 SLC4A3P48751 1232 aa16.33■□□□□ 0.21
PDXDC1-218ENST00000627450 HMG20BQ9P0W2 317 aa16.33■□□□□ 0.21
PDXDC1-218ENST00000627450 NSFL1CQ9UNZ2 370 aaKnown RBP16.33■□□□□ 0.21
PDXDC1-218ENST00000627450 MYO5AQ9Y4I1 1855 aaKnown RBP16.33■□□□□ 0.21
PDXDC1-218ENST00000627450 CHRNA5P30532 468 aa16.33■□□□□ 0.2
PDXDC1-218ENST00000627450 HOXA10P31260 410 aaPredicted RBP16.33■□□□□ 0.2
PDXDC1-218ENST00000627450 RBM25P49756 843 aaKnown RBP16.33■□□□□ 0.2
PDXDC1-218ENST00000627450 UBE4AQ14139 1066 aa16.33■□□□□ 0.2
PDXDC1-218ENST00000627450 ZNF589Q86UQ0 364 aaPredicted RBP16.33■□□□□ 0.2
PDXDC1-218ENST00000627450 ARID4AP29374 1257 aaPredicted RBP16.32■□□□□ 0.2
PDXDC1-218ENST00000627450 PPIL4Q8WUA2 492 aaKnown RBP eCLIP16.32■□□□□ 0.2
PDXDC1-218ENST00000627450 KIF2CQ99661 725 aa16.32■□□□□ 0.2
PDXDC1-218ENST00000627450 QSER1Q2KHR3 1735 aa16.32■□□□□ 0.2
PDXDC1-218ENST00000627450 GPSM2P81274 684 aa16.32■□□□□ 0.2
PDXDC1-218ENST00000627450 R3HDM1Q15032 1099 aaKnown RBP16.32■□□□□ 0.2
PDXDC1-218ENST00000627450 CCDC129Q6ZRS4 1044 aa16.32■□□□□ 0.2
PDXDC1-218ENST00000627450 ZNF622Q969S3 477 aaKnown RBP eCLIP16.32■□□□□ 0.24e-7■■□□□ 13.6
PDXDC1-218ENST00000627450 FAM84BQ96KN1 310 aaPredicted RBP16.32■□□□□ 0.2
PDXDC1-218ENST00000627450 ZNF804BA4D1E1 1349 aa16.32■□□□□ 0.2
PDXDC1-218ENST00000627450 ARAP2Q8WZ64 1704 aa16.32■□□□□ 0.2
PDXDC1-218ENST00000627450 PDE6BP35913 854 aa16.32■□□□□ 0.2
PDXDC1-218ENST00000627450 ANKRD2Q9GZV1 360 aa16.32■□□□□ 0.2
PDXDC1-218ENST00000627450 COL11A2P13942 1736 aaPredicted RBP16.31■□□□□ 0.2
PDXDC1-218ENST00000627450 PTH1RQ03431 593 aa16.31■□□□□ 0.2
PDXDC1-218ENST00000627450 SPATA5Q8NB90 893 aa16.31■□□□□ 0.2
PDXDC1-218ENST00000627450 CRAMP1Q96RY5 1269 aa16.31■□□□□ 0.2
PDXDC1-218ENST00000627450 PIH1D3Q9NQM4 214 aaKnown RBP16.31■□□□□ 0.2
PDXDC1-218ENST00000627450 ATF5Q9Y2D1 282 aaPredicted RBP16.31■□□□□ 0.2
PDXDC1-218ENST00000627450 VPS37DQ86XT2 251 aa16.31■□□□□ 0.2
PDXDC1-218ENST00000627450 C2CD5Q86YS7 1000 aa16.3■□□□□ 0.2
PDXDC1-218ENST00000627450 ZNF512BQ96KM6 892 aaPredicted RBP16.3■□□□□ 0.2
PDXDC1-218ENST00000627450 IPO9Q96P70 1041 aaKnown RBP16.3■□□□□ 0.2
PDXDC1-218ENST00000627450 JAG2Q9Y219 1238 aa16.3■□□□□ 0.2
PDXDC1-218ENST00000627450 IDH1O75874 414 aaKnown RBP16.3■□□□□ 0.2
PDXDC1-218ENST00000627450 BBOX1O75936 387 aa16.3■□□□□ 0.2
PDXDC1-218ENST00000627450 UQCRFS1P1P0C7P4 283 aa16.3■□□□□ 0.2
PDXDC1-218ENST00000627450 NPR1P16066 1061 aa16.3■□□□□ 0.2
PDXDC1-218ENST00000627450 RUFY2Q8WXA3 655 aa16.3■□□□□ 0.2
PDXDC1-218ENST00000627450 LSG1Q9H089 658 aaKnown RBP16.3■□□□□ 0.2
PDXDC1-218ENST00000627450 ZNF219Q9P2Y4 722 aaPredicted RBP16.3■□□□□ 0.2
PDXDC1-218ENST00000627450 PALD1Q9ULE6 856 aa16.3■□□□□ 0.2
PDXDC1-218ENST00000627450 PSDA5PKW4 1024 aaPredicted RBP16.29■□□□□ 0.2
PDXDC1-218ENST00000627450 PPEF1O14829 653 aaPredicted RBP16.29■□□□□ 0.2
PDXDC1-218ENST00000627450 CAVIN4Q5BKX8 364 aa16.29■□□□□ 0.2
PDXDC1-218ENST00000627450 CACNA1SQ13698 1873 aa16.29■□□□□ 0.2
PDXDC1-218ENST00000627450 HIP1O00291 1037 aa16.29■□□□□ 0.2
PDXDC1-218ENST00000627450 XDHP47989 1333 aa16.29■□□□□ 0.2
PDXDC1-218ENST00000627450 MASTLQ96GX5 879 aa16.28■□□□□ 0.2
PDXDC1-218ENST00000627450 COL1A1P02452 1464 aaPredicted RBP16.28■□□□□ 0.2
PDXDC1-218ENST00000627450 UFL1O94874 794 aa16.28■□□□□ 0.2
PDXDC1-218ENST00000627450 KIAA1211Q6ZU35 1233 aa16.28■□□□□ 0.2
PDXDC1-218ENST00000627450 POLLQ9UGP5 575 aa16.28■□□□□ 0.2
PDXDC1-218ENST00000627450 WWC3Q9ULE0 1092 aa16.28■□□□□ 0.2
PDXDC1-218ENST00000627450 H0YIN7 160 aa16.27■□□□□ 0.2
PDXDC1-218ENST00000627450 FRAT2O75474 233 aaPredicted RBP16.27■□□□□ 0.2
PDXDC1-218ENST00000627450 FBXO33Q7Z6M2 555 aa16.27■□□□□ 0.2
PDXDC1-218ENST00000627450 OSBP2Q969R2 916 aa16.27■□□□□ 0.2
PDXDC1-218ENST00000627450 IRS2Q9Y4H2 1338 aa16.27■□□□□ 0.19
PDXDC1-218ENST00000627450 RNF113AO15541 343 aaKnown RBP16.27■□□□□ 0.19
PDXDC1-218ENST00000627450 HIBADHP31937 336 aaKnown RBP16.27■□□□□ 0.19
PDXDC1-218ENST00000627450 WASHC4Q2M389 1173 aa16.27■□□□□ 0.19
PDXDC1-218ENST00000627450 RAD50Q92878 1312 aa16.26■□□□□ 0.19
PDXDC1-218ENST00000627450 SLC9C2Q5TAH2 1124 aa16.26■□□□□ 0.19
PDXDC1-218ENST00000627450 ABCF2Q9UG63 623 aa16.26■□□□□ 0.19
PDXDC1-218ENST00000627450 MED23Q9ULK4 1368 aa16.26■□□□□ 0.19
PDXDC1-218ENST00000627450 M0R2C6 588 aa16.26■□□□□ 0.19
PDXDC1-218ENST00000627450 ALDH1B1P30837 517 aa16.26■□□□□ 0.19
PDXDC1-218ENST00000627450 MCMDC2Q4G0Z9 681 aa16.26■□□□□ 0.19
PDXDC1-218ENST00000627450 VPS53Q5VIR6 699 aa16.26■□□□□ 0.19
PDXDC1-218ENST00000627450 SLC16A10Q8TF71 515 aa16.26■□□□□ 0.19
PDXDC1-218ENST00000627450 PUS7LQ9H0K6 701 aaKnown RBP16.26■□□□□ 0.19
PDXDC1-218ENST00000627450 LEMD3Q9Y2U8 911 aa16.26■□□□□ 0.19
PDXDC1-218ENST00000627450 ATP6V0A2Q9Y487 856 aa16.26■□□□□ 0.19
PDXDC1-218ENST00000627450 CCDC171Q6TFL3 1326 aa16.25■□□□□ 0.19
PDXDC1-218ENST00000627450 C6orf229H3BNL8 230 aa16.25■□□□□ 0.19
PDXDC1-218ENST00000627450 ZMYM1Q5SVZ6 1142 aa16.25■□□□□ 0.19
PDXDC1-218ENST00000627450 GGA1Q9UJY5 639 aa16.25■□□□□ 0.19
PDXDC1-218ENST00000627450 MAST3O60307 1309 aa16.25■□□□□ 0.19
PDXDC1-218ENST00000627450 CD2BP2O95400 341 aaKnown RBP16.25■□□□□ 0.19
PDXDC1-218ENST00000627450 CHAF1AQ13111 956 aaPredicted RBP16.25■□□□□ 0.19
PDXDC1-218ENST00000627450 PRPF40BQ6NWY9 871 aaKnown RBP16.25■□□□□ 0.19
PDXDC1-218ENST00000627450 SP8Q8IXZ3 490 aa16.25■□□□□ 0.19
PDXDC1-218ENST00000627450 TBC1D16Q8TBP0 767 aa16.25■□□□□ 0.19
PDXDC1-218ENST00000627450 GNL3LQ9NVN8 582 aaKnown RBP16.25■□□□□ 0.19
PDXDC1-218ENST00000627450 SLX4Q8IY92 1834 aa16.24■□□□□ 0.19
PDXDC1-218ENST00000627450 A0A0G2JLW4 131 aa16.24■□□□□ 0.19
PDXDC1-218ENST00000627450 RIMBP2O15034 1052 aa16.24■□□□□ 0.19
PDXDC1-218ENST00000627450 EIF5BO60841 1220 aaKnown RBP16.24■□□□□ 0.19
PDXDC1-218ENST00000627450 TTF1Q15361 905 aaPredicted RBP16.24■□□□□ 0.19
PDXDC1-218ENST00000627450 RASEFQ8IZ41 740 aa16.24■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms