RNA–Protein interactions for RNA: ENST00000622494.1

RPRD1B-209, Transcript of regulation of nuclear pre-mRNA domain containing 1B, humanhuman

TSL 3

Gene RPRD1B, Length 469 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1B-209ENST00000622494 FAM187AA6NFU0 413 aa6.76□□□□□ -1.33
RPRD1B-209ENST00000622494 IL13P35225 146 aa6.76□□□□□ -1.33
RPRD1B-209ENST00000622494 SMCPP49901 116 aaPredicted RBP6.76□□□□□ -1.33
RPRD1B-209ENST00000622494 MTHFSP49914 203 aa6.76□□□□□ -1.33
RPRD1B-209ENST00000622494 SEMA3FQ13275 785 aa6.76□□□□□ -1.33
RPRD1B-209ENST00000622494 SULT6B1Q6IMI4 303 aa6.76□□□□□ -1.33
RPRD1B-209ENST00000622494 COL23A1Q86Y22 540 aaPredicted RBP6.76□□□□□ -1.33
RPRD1B-209ENST00000622494 NLGN2Q8NFZ4 835 aa6.76□□□□□ -1.33
RPRD1B-209ENST00000622494 FHDC1Q9C0D6 1143 aaPredicted RBP6.76□□□□□ -1.33
RPRD1B-209ENST00000622494 SPON1Q9HCB6 807 aa6.76□□□□□ -1.33
RPRD1B-209ENST00000622494 C4AP0C0L4 1744 aa6.76□□□□□ -1.33
RPRD1B-209ENST00000622494 COL5A3P25940 1745 aaPredicted RBP6.76□□□□□ -1.33
RPRD1B-209ENST00000622494 RNF20Q5VTR2 975 aa6.75□□□□□ -1.33
RPRD1B-209ENST00000622494 ZNF530Q6P9A1 599 aaPredicted RBP6.75□□□□□ -1.33
RPRD1B-209ENST00000622494 CCDC116Q8IYX3 515 aa6.75□□□□□ -1.33
RPRD1B-209ENST00000622494 PPP1R1BQ9UD71 204 aaPredicted RBP6.75□□□□□ -1.33
RPRD1B-209ENST00000622494 KNSTRNQ9Y448 316 aa6.75□□□□□ -1.33
RPRD1B-209ENST00000622494 KIF24Q5T7B8 1368 aa6.74□□□□□ -1.33
RPRD1B-209ENST00000622494 TIMP2P16035 220 aa6.74□□□□□ -1.33
RPRD1B-209ENST00000622494 DHX9Q08211 1270 aaKnown RBP6.74□□□□□ -1.33
RPRD1B-209ENST00000622494 DDX10Q13206 875 aaKnown RBP6.74□□□□□ -1.33
RPRD1B-209ENST00000622494 CTC1Q2NKJ3 1217 aa6.74□□□□□ -1.33
RPRD1B-209ENST00000622494 PKDCCQ504Y2 493 aa6.74□□□□□ -1.33
RPRD1B-209ENST00000622494 HDGFL1Q5TGJ6 251 aa6.74□□□□□ -1.33
RPRD1B-209ENST00000622494 GLMNQ92990 594 aa6.74□□□□□ -1.33
RPRD1B-209ENST00000622494 LGR6Q9HBX8 967 aa6.74□□□□□ -1.33
RPRD1B-209ENST00000622494 ATG3Q9NT62 314 aa6.74□□□□□ -1.33
RPRD1B-209ENST00000622494 TFCP2L1Q9NZI6 479 aa6.74□□□□□ -1.33
RPRD1B-209ENST00000622494 KDRP35968 1356 aa6.73□□□□□ -1.33
RPRD1B-209ENST00000622494 SIPA1L3O60292 1781 aaPredicted RBP6.73□□□□□ -1.33
RPRD1B-209ENST00000622494 ERVH48-1M5A8F1 160 aa6.73□□□□□ -1.33
RPRD1B-209ENST00000622494 LCE2BO14633 110 aa6.73□□□□□ -1.33
RPRD1B-209ENST00000622494 PPP1R26Q5T8A7 1209 aaPredicted RBP6.73□□□□□ -1.33
RPRD1B-209ENST00000622494 UCN2Q96RP3 112 aa6.73□□□□□ -1.33
RPRD1B-209ENST00000622494 SPG7Q9UQ90 795 aa6.73□□□□□ -1.33
RPRD1B-209ENST00000622494 KIAA1551Q9HCM1 1747 aa6.73□□□□□ -1.33
RPRD1B-209ENST00000622494 N4BP2Q86UW6 1770 aaPredicted RBP6.72□□□□□ -1.33
RPRD1B-209ENST00000622494 ADAMTS7Q9UKP4 1686 aa6.72□□□□□ -1.33
RPRD1B-209ENST00000622494 PTCD1O75127 700 aaKnown RBP6.72□□□□□ -1.33
RPRD1B-209ENST00000622494 SLC39A6Q13433 755 aa6.72□□□□□ -1.33
RPRD1B-209ENST00000622494 MTHFSDQ2M296 383 aaKnown RBP6.72□□□□□ -1.33
RPRD1B-209ENST00000622494 TRAF7Q6Q0C0 670 aa6.72□□□□□ -1.33
RPRD1B-209ENST00000622494 NFATC2IPQ8NCF5 419 aa6.72□□□□□ -1.33
RPRD1B-209ENST00000622494 PHACTR3Q96KR7 559 aa6.72□□□□□ -1.33
RPRD1B-209ENST00000622494 CCDC85AQ96PX6 553 aaPredicted RBP6.72□□□□□ -1.33
RPRD1B-209ENST00000622494 ARXQ96QS3 562 aa6.72□□□□□ -1.33
RPRD1B-209ENST00000622494 SYT17Q9BSW7 474 aa6.72□□□□□ -1.33
RPRD1B-209ENST00000622494 MTFR1LQ9H019 292 aa6.72□□□□□ -1.33
RPRD1B-209ENST00000622494 TMOD3Q9NYL9 352 aa6.72□□□□□ -1.33
RPRD1B-209ENST00000622494 KCPQ6ZWJ8 1503 aa6.71□□□□□ -1.33
RPRD1B-209ENST00000622494 SENP3-EIF4A1A0A087X0R7 540 aa6.71□□□□□ -1.34
RPRD1B-209ENST00000622494 LOC102724428A0A0B4J2F2 783 aa6.71□□□□□ -1.34
RPRD1B-209ENST00000622494 PIK3CDO00329 1044 aa6.71□□□□□ -1.34
RPRD1B-209ENST00000622494 U2SURPO15042 1029 aaKnown RBP6.71□□□□□ -1.34
RPRD1B-209ENST00000622494 LILRA1O75019 489 aa6.71□□□□□ -1.34
RPRD1B-209ENST00000622494 SIK1P57059 783 aa6.71□□□□□ -1.34
RPRD1B-209ENST00000622494 WDR4P57081 412 aaKnown RBP6.71□□□□□ -1.34
RPRD1B-209ENST00000622494 SLC27A3Q5K4L6 730 aa6.71□□□□□ -1.34
RPRD1B-209ENST00000622494 IFNL2Q8IZJ0 200 aa6.71□□□□□ -1.34
RPRD1B-209ENST00000622494 ITPKCQ96DU7 683 aa6.71□□□□□ -1.34
RPRD1B-209ENST00000622494 AAASQ9NRG9 546 aa6.71□□□□□ -1.34
RPRD1B-209ENST00000622494 TMPRSS4Q9NRS4 437 aa6.71□□□□□ -1.34
RPRD1B-209ENST00000622494 SRP68Q9UHB9 627 aaKnown RBP6.71□□□□□ -1.34
RPRD1B-209ENST00000622494 DLG5Q8TDM6 1919 aa6.71□□□□□ -1.34
RPRD1B-209ENST00000622494 UBR2Q8IWV8 1755 aa6.7□□□□□ -1.34
RPRD1B-209ENST00000622494 CICQ96RK0 1608 aaPredicted RBP6.7□□□□□ -1.34
RPRD1B-209ENST00000622494 KCNQ3O43525 872 aa6.7□□□□□ -1.34
RPRD1B-209ENST00000622494 ZIC2O95409 532 aaPredicted RBP6.7□□□□□ -1.34
RPRD1B-209ENST00000622494 YBX3P16989 372 aaKnown RBP eCLIP6.7□□□□□ -1.34
RPRD1B-209ENST00000622494 PPP2R1AP30153 589 aa6.7□□□□□ -1.34
RPRD1B-209ENST00000622494 ERVK-9P63128 1117 aa6.7□□□□□ -1.34
RPRD1B-209ENST00000622494 TSGA10IPQ3SY00 556 aa6.7□□□□□ -1.34
RPRD1B-209ENST00000622494 SLFNL1Q499Z3 407 aa6.7□□□□□ -1.34
RPRD1B-209ENST00000622494 Q6ZVU0 165 aa6.7□□□□□ -1.34
RPRD1B-209ENST00000622494 RNF135Q8IUD6 432 aa6.7□□□□□ -1.34
RPRD1B-209ENST00000622494 ZNF784Q8NCA9 323 aaPredicted RBP6.7□□□□□ -1.34
RPRD1B-209ENST00000622494 ZFAND3Q9H8U3 227 aa6.7□□□□□ -1.34
RPRD1B-209ENST00000622494 PGPEP1Q9NXJ5 209 aa6.7□□□□□ -1.34
RPRD1B-209ENST00000622494 MRC1P22897 1456 aa6.69□□□□□ -1.34
RPRD1B-209ENST00000622494 PRAMEF22A3QJZ6 481 aa6.69□□□□□ -1.34
RPRD1B-209ENST00000622494 CAPN5O15484 640 aaPredicted RBP6.69□□□□□ -1.34
RPRD1B-209ENST00000622494 DIAPH1O60610 1272 aaKnown RBP6.69□□□□□ -1.34
RPRD1B-209ENST00000622494 PIP4K2AP48426 406 aaPredicted RBP6.69□□□□□ -1.34
RPRD1B-209ENST00000622494 DCTN1Q14203 1278 aa6.69□□□□□ -1.34
RPRD1B-209ENST00000622494 MAP7D1Q3KQU3 841 aa6.69□□□□□ -1.34
RPRD1B-209ENST00000622494 PLEKHO1Q53GL0 409 aaPredicted RBP6.69□□□□□ -1.34
RPRD1B-209ENST00000622494 DNAJC10Q8IXB1 793 aa6.69□□□□□ -1.34
RPRD1B-209ENST00000622494 CALR3Q96L12 384 aaKnown RBP6.69□□□□□ -1.34
RPRD1B-209ENST00000622494 AXIN1O15169 862 aa6.68□□□□□ -1.34
RPRD1B-209ENST00000622494 RNMTO43148 476 aaKnown RBP6.68□□□□□ -1.34
RPRD1B-209ENST00000622494 ADD1P35611 737 aaKnown RBP6.68□□□□□ -1.34
RPRD1B-209ENST00000622494 CABP4P57796 275 aa6.68□□□□□ -1.34
RPRD1B-209ENST00000622494 RAB15P59190 212 aa6.68□□□□□ -1.34
RPRD1B-209ENST00000622494 Q6ZNB5 142 aa6.68□□□□□ -1.34
RPRD1B-209ENST00000622494 MEIOBQ8N635 442 aa6.68□□□□□ -1.34
RPRD1B-209ENST00000622494 PLPP7Q8NBV4 271 aa6.68□□□□□ -1.34
RPRD1B-209ENST00000622494 IL17REQ8NFR9 667 aa6.68□□□□□ -1.34
RPRD1B-209ENST00000622494 PCDHB11Q9Y5F2 797 aa6.68□□□□□ -1.34
RPRD1B-209ENST00000622494 AFDNP55196 1824 aaKnown RBP6.68□□□□□ -1.34
RPRD1B-209ENST00000622494 CHD4Q14839 1912 aa6.68□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms