RNA–Protein interactions for RNA: ENST00000618449.4

CPEB1-216, Transcript of cytoplasmic polyadenylation element binding protein 1, humanhuman

TSL 1 (best) BASIC

Gene CPEB1, Length 2,459 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPEB1-216ENST00000618449 ZAP70P43403 619 aa13.52□□□□□ -0.25
CPEB1-216ENST00000618449 SLFNL1Q499Z3 407 aa13.52□□□□□ -0.25
CPEB1-216ENST00000618449 CCDC102BQ68D86 513 aa13.52□□□□□ -0.25
CPEB1-216ENST00000618449 CELF1Q92879 486 aaKnown RBP13.52□□□□□ -0.25
CPEB1-216ENST00000618449 MAP4K1Q92918 833 aa13.52□□□□□ -0.25
CPEB1-216ENST00000618449 ZNF512BQ96KM6 892 aaPredicted RBP13.52□□□□□ -0.25
CPEB1-216ENST00000618449 CWC22Q9HCG8 908 aaKnown RBP13.52□□□□□ -0.25
CPEB1-216ENST00000618449 SNX14Q9Y5W7 946 aa13.52□□□□□ -0.25
CPEB1-216ENST00000618449 NPHP1O15259 732 aa13.51□□□□□ -0.25
CPEB1-216ENST00000618449 PHKA1P46020 1223 aa13.51□□□□□ -0.25
CPEB1-216ENST00000618449 NUCB2P80303 420 aa13.51□□□□□ -0.25
CPEB1-216ENST00000618449 CLEC17AQ6ZS10 378 aa13.51□□□□□ -0.25
CPEB1-216ENST00000618449 SLC5A1P13866 664 aa13.51□□□□□ -0.25
CPEB1-216ENST00000618449 NECTIN1Q15223 517 aa13.51□□□□□ -0.25
CPEB1-216ENST00000618449 MCMDC2Q4G0Z9 681 aa13.51□□□□□ -0.25
CPEB1-216ENST00000618449 PRPF40BQ6NWY9 871 aaKnown RBP13.51□□□□□ -0.25
CPEB1-216ENST00000618449 TICAM2Q86XR7 235 aa13.51□□□□□ -0.25
CPEB1-216ENST00000618449 BSDC1Q9NW68 430 aaPredicted RBP13.51□□□□□ -0.25
CPEB1-216ENST00000618449 RBM8AQ9Y5S9 174 aaKnown RBP13.51□□□□□ -0.25
CPEB1-216ENST00000618449 MCM2P49736 904 aa13.5□□□□□ -0.25
CPEB1-216ENST00000618449 CCDC129Q6ZRS4 1044 aa13.5□□□□□ -0.25
CPEB1-216ENST00000618449 UPF3BQ9BZI7 483 aaKnown RBP13.5□□□□□ -0.25
CPEB1-216ENST00000618449 ARAP2Q8WZ64 1704 aa13.5□□□□□ -0.25
CPEB1-216ENST00000618449 CYP2E1P05181 493 aaPredicted RBP13.5□□□□□ -0.25
CPEB1-216ENST00000618449 ARID4AP29374 1257 aaPredicted RBP13.5□□□□□ -0.25
CPEB1-216ENST00000618449 ZNF827Q17R98 1081 aa13.5□□□□□ -0.25
CPEB1-216ENST00000618449 ZGPATQ8N5A5 531 aaKnown RBP13.5□□□□□ -0.25
CPEB1-216ENST00000618449 CNBD1Q8NA66 436 aa13.5□□□□□ -0.25
CPEB1-216ENST00000618449 AKAP11Q9UKA4 1901 aa13.49□□□□□ -0.25
CPEB1-216ENST00000618449 FSD2A1L4K1 749 aa13.49□□□□□ -0.25
CPEB1-216ENST00000618449 GOLGA6L3A6NEY3 463 aa13.49□□□□□ -0.25
CPEB1-216ENST00000618449 RNF113AO15541 343 aaKnown RBP13.49□□□□□ -0.25
CPEB1-216ENST00000618449 BAG4O95429 457 aaKnown RBP13.49□□□□□ -0.25
CPEB1-216ENST00000618449 KCNJ4P48050 445 aa13.49□□□□□ -0.25
CPEB1-216ENST00000618449 ZMYM1Q5SVZ6 1142 aa13.49□□□□□ -0.25
CPEB1-216ENST00000618449 KCNB2Q92953 911 aa13.49□□□□□ -0.25
CPEB1-216ENST00000618449 HELLSQ9NRZ9 838 aa13.49□□□□□ -0.25
CPEB1-216ENST00000618449 MINPP1Q9UNW1 487 aa13.49□□□□□ -0.25
CPEB1-216ENST00000618449 TNRC6CQ9HCJ0 1690 aaKnown RBP13.49□□□□□ -0.25
CPEB1-216ENST00000618449 GOLGA6L22H0YM25 854 aa13.49□□□□□ -0.25
CPEB1-216ENST00000618449 UQCRFS1P1P0C7P4 283 aa13.49□□□□□ -0.25
CPEB1-216ENST00000618449 HMGB2P26583 209 aaKnown RBP13.49□□□□□ -0.25
CPEB1-216ENST00000618449 TM4SF1P30408 202 aa13.49□□□□□ -0.25
CPEB1-216ENST00000618449 RPS8P62241 208 aaKnown RBP13.49□□□□□ -0.25
CPEB1-216ENST00000618449 SKOR2Q2VWA4 1001 aaPredicted RBP13.49□□□□□ -0.25
CPEB1-216ENST00000618449 PRR5LQ6MZQ0 368 aa13.49□□□□□ -0.25
CPEB1-216ENST00000618449 TFCP2L1Q9NZI6 479 aa13.49□□□□□ -0.25
CPEB1-216ENST00000618449 CREB3L3Q68CJ9 461 aa13.48□□□□□ -0.25
CPEB1-216ENST00000618449 FBXO41Q8TF61 875 aa13.48□□□□□ -0.25
CPEB1-216ENST00000618449 AKT1S1Q96B36 256 aa13.48□□□□□ -0.25
CPEB1-216ENST00000618449 TMX3Q96JJ7 454 aa13.48□□□□□ -0.25
CPEB1-216ENST00000618449 WTIPA6NIX2 430 aaPredicted RBP13.48□□□□□ -0.25
CPEB1-216ENST00000618449 SERPINB2P05120 415 aa13.47□□□□□ -0.25
CPEB1-216ENST00000618449 BCAMP50895 628 aa13.47□□□□□ -0.25
CPEB1-216ENST00000618449 ADCK5Q3MIX3 580 aa13.47□□□□□ -0.25
CPEB1-216ENST00000618449 HMG20BQ9P0W2 317 aa13.47□□□□□ -0.25
CPEB1-216ENST00000618449 MAST3O60307 1309 aa13.47□□□□□ -0.25
CPEB1-216ENST00000618449 SLC27A2O14975 620 aa13.47□□□□□ -0.25
CPEB1-216ENST00000618449 ZKSCAN1P17029 563 aaPredicted RBP13.47□□□□□ -0.25
CPEB1-216ENST00000618449 PKP1Q13835 747 aa13.47□□□□□ -0.25
CPEB1-216ENST00000618449 RASGRF1Q13972 1273 aa13.47□□□□□ -0.25
CPEB1-216ENST00000618449 LRRFIP1Q32MZ4 808 aaKnown RBP13.47□□□□□ -0.25
CPEB1-216ENST00000618449 A0A1B0GUL6 1792 aa13.46□□□□□ -0.25
CPEB1-216ENST00000618449 DDR1Q08345 913 aa13.46□□□□□ -0.25
CPEB1-216ENST00000618449 CUL4AQ13619 759 aa13.46□□□□□ -0.25
CPEB1-216ENST00000618449 SPATA5Q8NB90 893 aa13.46□□□□□ -0.25
CPEB1-216ENST00000618449 OSBP2Q969R2 916 aa13.46□□□□□ -0.25
CPEB1-216ENST00000618449 PIH1D3Q9NQM4 214 aaKnown RBP13.46□□□□□ -0.25
CPEB1-216ENST00000618449 TNS1Q9HBL0 1735 aaKnown RBP13.46□□□□□ -0.26
CPEB1-216ENST00000618449 M0R2C6 588 aa13.46□□□□□ -0.26
CPEB1-216ENST00000618449 ZFYP08048 801 aaPredicted RBP13.46□□□□□ -0.26
CPEB1-216ENST00000618449 UBE4AQ14139 1066 aa13.46□□□□□ -0.26
CPEB1-216ENST00000618449 TTF1Q15361 905 aaPredicted RBP13.46□□□□□ -0.26
CPEB1-216ENST00000618449 VPS53Q5VIR6 699 aa13.46□□□□□ -0.26
CPEB1-216ENST00000618449 COL23A1Q86Y22 540 aaPredicted RBP13.46□□□□□ -0.26
CPEB1-216ENST00000618449 CPA1P15085 419 aa13.45□□□□□ -0.26
CPEB1-216ENST00000618449 CASTP20810 708 aaKnown RBP13.45□□□□□ -0.26
CPEB1-216ENST00000618449 WASHC4Q2M389 1173 aa13.45□□□□□ -0.26
CPEB1-216ENST00000618449 RNF20Q5VTR2 975 aa13.45□□□□□ -0.26
CPEB1-216ENST00000618449 NOL8Q76FK4 1167 aaKnown RBP13.45□□□□□ -0.26
CPEB1-216ENST00000618449 JAKMIP1Q96N16 626 aaKnown RBP13.45□□□□□ -0.26
CPEB1-216ENST00000618449 TAF6LQ9Y6J9 622 aa13.45□□□□□ -0.26
CPEB1-216ENST00000618449 POLRMTO00411 1230 aaKnown RBP13.45□□□□□ -0.26
CPEB1-216ENST00000618449 ST5P78524 1137 aa13.45□□□□□ -0.26
CPEB1-216ENST00000618449 GLIPR1L2Q4G1C9 344 aa13.45□□□□□ -0.26
CPEB1-216ENST00000618449 TTC14Q96N46 770 aa13.45□□□□□ -0.26
CPEB1-216ENST00000618449 DDX24Q9GZR7 859 aaKnown RBP eCLIP13.45□□□□□ -0.263e-7■■■■■ 42.3
CPEB1-216ENST00000618449 IDH1O75874 414 aaKnown RBP13.44□□□□□ -0.26
CPEB1-216ENST00000618449 GYG1P46976 350 aa13.44□□□□□ -0.26
CPEB1-216ENST00000618449 APPBP2Q92624 585 aa13.44□□□□□ -0.26
CPEB1-216ENST00000618449 TM6SF1Q9BZW5 370 aa13.44□□□□□ -0.26
CPEB1-216ENST00000618449 PUS7LQ9H0K6 701 aaKnown RBP13.44□□□□□ -0.26
CPEB1-216ENST00000618449 ZSWIM6Q9HCJ5 1215 aa13.44□□□□□ -0.26
CPEB1-216ENST00000618449 U3KPZ7 1027 aaPredicted RBP13.44□□□□□ -0.26
CPEB1-216ENST00000618449 HSPD1P10809 573 aaKnown RBP13.44□□□□□ -0.26
CPEB1-216ENST00000618449 ADD2P35612 726 aa13.44□□□□□ -0.26
CPEB1-216ENST00000618449 SLC9C2Q5TAH2 1124 aa13.44□□□□□ -0.26
CPEB1-216ENST00000618449 MCTP1Q6DN14 999 aa13.44□□□□□ -0.26
CPEB1-216ENST00000618449 ISY1Q9ULR0 285 aaKnown RBP13.44□□□□□ -0.26
CPEB1-216ENST00000618449 ZDHHC9Q9Y397 364 aa13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms