RNA–Protein interactions for RNA: ENST00000616315.1

NEAT1-205, nuclear paraspeckle assembly transcript 1, humanhuman

TSL 2 BASIC

Gene NEAT1, Length 483 nt, Biotype lincRNA, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEAT1-205ENST00000616315 NOVA2Q9UNW9 492 aaKnown RBP7.54□□□□□ -1.2
NEAT1-205ENST00000616315 HMX2A2RU54 273 aa7.53□□□□□ -1.2
NEAT1-205ENST00000616315 RANGAP1P46060 587 aaPredicted RBP7.53□□□□□ -1.2
NEAT1-205ENST00000616315 KIAA1211Q6ZU35 1233 aa7.53□□□□□ -1.2
NEAT1-205ENST00000616315 CACTIN-AS1Q8N1I8 211 aa7.53□□□□□ -1.2
NEAT1-205ENST00000616315 OR13H1Q8NG92 308 aa7.53□□□□□ -1.2
NEAT1-205ENST00000616315 FAM46AQ96IP4 442 aaKnown RBP7.53□□□□□ -1.2
NEAT1-205ENST00000616315 CARD10Q9BWT7 1032 aa7.53□□□□□ -1.2
NEAT1-205ENST00000616315 UTP3Q9NQZ2 479 aaKnown RBP eCLIP7.53□□□□□ -1.2
NEAT1-205ENST00000616315 YBX3P16989 372 aaKnown RBP eCLIP7.52□□□□□ -1.21
NEAT1-205ENST00000616315 CDC25BP30305 580 aa7.52□□□□□ -1.21
NEAT1-205ENST00000616315 TMEM164Q5U3C3 297 aa7.52□□□□□ -1.21
NEAT1-205ENST00000616315 CEP135Q66GS9 1140 aa7.52□□□□□ -1.21
NEAT1-205ENST00000616315 RNF43Q68DV7 783 aa7.52□□□□□ -1.21
NEAT1-205ENST00000616315 STK32AQ8WU08 396 aa7.52□□□□□ -1.21
NEAT1-205ENST00000616315 UTP4Q969X6 686 aaKnown RBP7.52□□□□□ -1.21
NEAT1-205ENST00000616315 RNF114Q9Y508 228 aa7.52□□□□□ -1.21
NEAT1-205ENST00000616315 DDX3YO15523 660 aaKnown RBP7.51□□□□□ -1.21
NEAT1-205ENST00000616315 NPM2Q86SE8 214 aaKnown RBP7.51□□□□□ -1.21
NEAT1-205ENST00000616315 DTX1Q86Y01 620 aa7.51□□□□□ -1.21
NEAT1-205ENST00000616315 FAM200AQ8TCP9 573 aa7.51□□□□□ -1.21
NEAT1-205ENST00000616315 PRIMPOLQ96LW4 560 aa7.51□□□□□ -1.21
NEAT1-205ENST00000616315 CEP41Q9BYV8 373 aa7.51□□□□□ -1.21
NEAT1-205ENST00000616315 ADAM11O75078 769 aa7.5□□□□□ -1.21
NEAT1-205ENST00000616315 CDC27P30260 824 aa7.5□□□□□ -1.21
NEAT1-205ENST00000616315 INTS5Q6P9B9 1019 aaKnown RBP7.5□□□□□ -1.21
NEAT1-205ENST00000616315 FOXD4L4Q8WXT5 416 aaPredicted RBP7.5□□□□□ -1.21
NEAT1-205ENST00000616315 MYRFLQ96LU7 910 aa7.5□□□□□ -1.21
NEAT1-205ENST00000616315 RASSF4Q9H2L5 321 aa7.5□□□□□ -1.21
NEAT1-205ENST00000616315 IVNS1ABPQ9Y6Y0 642 aa7.5□□□□□ -1.21
NEAT1-205ENST00000616315 UBAP1LF5GYI3 381 aa7.49□□□□□ -1.21
NEAT1-205ENST00000616315 FSCN2O14926 492 aa7.49□□□□□ -1.21
NEAT1-205ENST00000616315 MFAP1P55081 439 aaKnown RBP7.49□□□□□ -1.21
NEAT1-205ENST00000616315 HYAL2Q12891 473 aa7.49□□□□□ -1.21
NEAT1-205ENST00000616315 UVSSAQ2YD98 709 aa7.49□□□□□ -1.21
NEAT1-205ENST00000616315 UBASH3BQ8TF42 649 aa7.49□□□□□ -1.21
NEAT1-205ENST00000616315 DBNDD2Q9BQY9 259 aa7.49□□□□□ -1.21
NEAT1-205ENST00000616315 SH2B1Q9NRF2 756 aaPredicted RBP7.49□□□□□ -1.21
NEAT1-205ENST00000616315 TNFRSF10BO14763 440 aa7.48□□□□□ -1.21
NEAT1-205ENST00000616315 EPHA1P21709 976 aa7.48□□□□□ -1.21
NEAT1-205ENST00000616315 GRIK1P39086 918 aa7.48□□□□□ -1.21
NEAT1-205ENST00000616315 DUOXA2Q1HG44 320 aa7.48□□□□□ -1.21
NEAT1-205ENST00000616315 CAPN12Q6ZSI9 719 aa7.48□□□□□ -1.21
NEAT1-205ENST00000616315 SHKBP1Q8TBC3 707 aa7.48□□□□□ -1.21
NEAT1-205ENST00000616315 COL26A1Q96A83 441 aa7.48□□□□□ -1.21
NEAT1-205ENST00000616315 SMNDC1O75940 238 aaKnown RBP eCLIP7.47□□□□□ -1.21
NEAT1-205ENST00000616315 BRD2P25440 801 aaKnown RBP7.47□□□□□ -1.21
NEAT1-205ENST00000616315 FAM20CQ8IXL6 584 aa7.47□□□□□ -1.21
NEAT1-205ENST00000616315 KLHDC7BQ96G42 594 aa7.47□□□□□ -1.21
NEAT1-205ENST00000616315 FAM83CQ9BQN1 747 aa7.47□□□□□ -1.21
NEAT1-205ENST00000616315 PRMT3O60678 531 aa7.46□□□□□ -1.22
NEAT1-205ENST00000616315 WNT11O96014 354 aa7.46□□□□□ -1.22
NEAT1-205ENST00000616315 CYP2E1P05181 493 aaPredicted RBP7.46□□□□□ -1.22
NEAT1-205ENST00000616315 OCLNQ16625 522 aa7.46□□□□□ -1.22
NEAT1-205ENST00000616315 LCE1DQ5T752 114 aa7.46□□□□□ -1.22
NEAT1-205ENST00000616315 C16orf46Q6P387 395 aa7.46□□□□□ -1.22
NEAT1-205ENST00000616315 CLEC10AQ8IUN9 316 aa7.46□□□□□ -1.22
NEAT1-205ENST00000616315 KLHL23Q8NBE8 558 aa7.46□□□□□ -1.22
NEAT1-205ENST00000616315 PIK3R5Q8WYR1 880 aa7.46□□□□□ -1.22
NEAT1-205ENST00000616315 SPACA7Q96KW9 195 aa7.46□□□□□ -1.22
NEAT1-205ENST00000616315 ADGRE2Q9UHX3 823 aa7.46□□□□□ -1.22
NEAT1-205ENST00000616315 GNEQ9Y223 722 aaKnown RBP7.46□□□□□ -1.22
NEAT1-205ENST00000616315 KIF4AO95239 1232 aa7.45□□□□□ -1.22
NEAT1-205ENST00000616315 BMP3P12645 472 aa7.45□□□□□ -1.22
NEAT1-205ENST00000616315 HOXA10P31260 410 aaPredicted RBP7.45□□□□□ -1.22
NEAT1-205ENST00000616315 SCNN1AP37088 669 aa7.45□□□□□ -1.22
NEAT1-205ENST00000616315 PREPP48147 710 aa7.45□□□□□ -1.22
NEAT1-205ENST00000616315 CEP120Q8N960 986 aa7.45□□□□□ -1.22
NEAT1-205ENST00000616315 CLP1Q92989 425 aaKnown RBP7.45□□□□□ -1.22
NEAT1-205ENST00000616315 POP1Q99575 1024 aaKnown RBP7.45□□□□□ -1.22
NEAT1-205ENST00000616315 KRTAP4-7Q9BYR0 210 aa7.45□□□□□ -1.22
NEAT1-205ENST00000616315 PBX4Q9BYU1 374 aa7.45□□□□□ -1.22
NEAT1-205ENST00000616315 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP7.45□□□□□ -1.22
NEAT1-205ENST00000616315 SWI5Q1ZZU3 235 aa7.44□□□□□ -1.22
NEAT1-205ENST00000616315 TTC39BQ5VTQ0 682 aaPredicted RBP7.44□□□□□ -1.22
NEAT1-205ENST00000616315 PPP1R3FQ6ZSY5 799 aaPredicted RBP7.44□□□□□ -1.22
NEAT1-205ENST00000616315 BEND4Q6ZU67 534 aa7.44□□□□□ -1.22
NEAT1-205ENST00000616315 SND1Q7KZF4 910 aaKnown RBP eCLIP7.44□□□□□ -1.22
NEAT1-205ENST00000616315 ZBTB39O15060 712 aa7.43□□□□□ -1.22
NEAT1-205ENST00000616315 FAM69CQ0P6D2 419 aa7.43□□□□□ -1.22
NEAT1-205ENST00000616315 FZD5Q13467 585 aa7.43□□□□□ -1.22
NEAT1-205ENST00000616315 RGS22Q8NE09 1264 aa7.43□□□□□ -1.22
NEAT1-205ENST00000616315 CCER1Q8TC90 406 aaPredicted RBP7.43□□□□□ -1.22
NEAT1-205ENST00000616315 GPR152Q8TDT2 470 aa7.43□□□□□ -1.22
NEAT1-205ENST00000616315 ADAM19Q9H013 955 aa7.43□□□□□ -1.22
NEAT1-205ENST00000616315 KCNF1Q9H3M0 494 aa7.43□□□□□ -1.22
NEAT1-205ENST00000616315 SEC31BQ9NQW1 1179 aa7.43□□□□□ -1.22
NEAT1-205ENST00000616315 WDR64B1ANS9 1081 aa7.42□□□□□ -1.22
NEAT1-205ENST00000616315 SSFA2P28290 1259 aa7.42□□□□□ -1.22
NEAT1-205ENST00000616315 ZAP70P43403 619 aa7.42□□□□□ -1.22
NEAT1-205ENST00000616315 NAA30Q147X3 362 aaPredicted RBP7.42□□□□□ -1.22
NEAT1-205ENST00000616315 PHLDB3Q6NSJ2 640 aa7.42□□□□□ -1.22
NEAT1-205ENST00000616315 FAM117BQ6P1L5 589 aa7.42□□□□□ -1.22
NEAT1-205ENST00000616315 ABI2Q9NYB9 513 aaPredicted RBP7.42□□□□□ -1.22
NEAT1-205ENST00000616315 MTMR7Q9Y216 660 aa7.42□□□□□ -1.22
NEAT1-205ENST00000616315 PTPRAP18433 802 aa7.41□□□□□ -1.22
NEAT1-205ENST00000616315 ATP2B4P23634 1241 aa7.41□□□□□ -1.22
NEAT1-205ENST00000616315 CCDC27Q2M243 656 aa7.41□□□□□ -1.22
NEAT1-205ENST00000616315 TXNDC2Q86VQ3 553 aa7.41□□□□□ -1.22
NEAT1-205ENST00000616315 MKNK1Q9BUB5 465 aa7.41□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms