RNA–Protein interactions for RNA: ENST00000600343.5

NFKB1-212, Transcript of nuclear factor kappa B subunit 1, humanhuman

TSL 2 BASIC

Gene NFKB1, Length 4,010 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1-212ENST00000600343 PUF60Q9UHX1 559 aaKnown RBP11.28□□□□□ -0.6
NFKB1-212ENST00000600343 TTC21AQ8NDW8 1320 aa11.28□□□□□ -0.6
NFKB1-212ENST00000600343 CDHR2Q9BYE9 1310 aa11.28□□□□□ -0.6
NFKB1-212ENST00000600343 VWA3AA6NCI4 1184 aa11.28□□□□□ -0.6
NFKB1-212ENST00000600343 LRRIQ3A6PVS8 624 aaPredicted RBP11.28□□□□□ -0.6
NFKB1-212ENST00000600343 PES1O00541 588 aaKnown RBP11.28□□□□□ -0.6
NFKB1-212ENST00000600343 ARHGAP25P42331 645 aa11.28□□□□□ -0.6
NFKB1-212ENST00000600343 SNCBQ16143 134 aa11.28□□□□□ -0.6
NFKB1-212ENST00000600343 SRGAP1Q7Z6B7 1085 aa11.28□□□□□ -0.6
NFKB1-212ENST00000600343 CADPS2Q86UW7 1296 aa11.28□□□□□ -0.6
NFKB1-212ENST00000600343 ATP6V0A4Q9HBG4 840 aa11.28□□□□□ -0.6
NFKB1-212ENST00000600343 GOPCQ9HD26 462 aa11.28□□□□□ -0.6
NFKB1-212ENST00000600343 IFNKQ9P0W0 207 aa11.28□□□□□ -0.6
NFKB1-212ENST00000600343 TFIP11Q9UBB9 837 aaKnown RBP11.28□□□□□ -0.6
NFKB1-212ENST00000600343 CFDP1Q9UEE9 299 aaPredicted RBP11.28□□□□□ -0.6
NFKB1-212ENST00000600343 WDR3Q9UNX4 943 aaKnown RBP eCLIP11.28□□□□□ -0.6
NFKB1-212ENST00000600343 FAM135BQ49AJ0 1406 aa11.28□□□□□ -0.6
NFKB1-212ENST00000600343 B4GALNT4Q76KP1 1039 aa11.28□□□□□ -0.6
NFKB1-212ENST00000600343 HOMER3Q9NSC5 361 aa11.28□□□□□ -0.6
NFKB1-212ENST00000600343 ANO10Q9NW15 660 aa11.28□□□□□ -0.6
NFKB1-212ENST00000600343 ZNF232Q9UNY5 417 aa11.28□□□□□ -0.6
NFKB1-212ENST00000600343 PRPF6O94906 941 aaKnown RBP11.27□□□□□ -0.6
NFKB1-212ENST00000600343 MAGEA8P43361 318 aa11.27□□□□□ -0.6
NFKB1-212ENST00000600343 TLDC1Q6P9B6 456 aa11.27□□□□□ -0.6
NFKB1-212ENST00000600343 MSANTD4Q8NCY6 345 aa11.27□□□□□ -0.6
NFKB1-212ENST00000600343 FAM76AQ8TAV0 307 aa11.27□□□□□ -0.6
NFKB1-212ENST00000600343 FBXW7Q969H0 707 aa11.27□□□□□ -0.6
NFKB1-212ENST00000600343 CC2D2AQ9P2K1 1620 aa11.27□□□□□ -0.61
NFKB1-212ENST00000600343 MTHFSP49914 203 aa11.27□□□□□ -0.61
NFKB1-212ENST00000600343 SMTNP53814 917 aa11.27□□□□□ -0.61
NFKB1-212ENST00000600343 E2F5Q15329 346 aa11.27□□□□□ -0.61
NFKB1-212ENST00000600343 CCDC40Q4G0X9 1142 aa11.27□□□□□ -0.61
NFKB1-212ENST00000600343 HHATQ5VTY9 493 aa11.27□□□□□ -0.61
NFKB1-212ENST00000600343 RUFY3Q7L099 469 aa11.27□□□□□ -0.61
NFKB1-212ENST00000600343 PIK3R4Q99570 1358 aa11.27□□□□□ -0.61
NFKB1-212ENST00000600343 PBRM1Q86U86 1689 aa11.27□□□□□ -0.61
NFKB1-212ENST00000600343 PPP1R12BO60237 982 aaPredicted RBP11.27□□□□□ -0.61
NFKB1-212ENST00000600343 SYF2O95926 243 aaKnown RBP11.27□□□□□ -0.61
NFKB1-212ENST00000600343 RHOXF2BP0C7M4 288 aa11.27□□□□□ -0.61
NFKB1-212ENST00000600343 NUTM2GQ5VZR2 741 aa11.27□□□□□ -0.61
NFKB1-212ENST00000600343 SCLT1Q96NL6 688 aa11.27□□□□□ -0.61
NFKB1-212ENST00000600343 RHOXF2Q9BQY4 288 aa11.27□□□□□ -0.61
NFKB1-212ENST00000600343 ADCY10Q96PN6 1610 aa11.27□□□□□ -0.61
NFKB1-212ENST00000600343 IL16Q14005 1332 aa11.27□□□□□ -0.61
NFKB1-212ENST00000600343 ATXN2Q99700 1313 aaKnown RBP11.27□□□□□ -0.61
NFKB1-212ENST00000600343 A0A087WWV3 80 aa11.26□□□□□ -0.61
NFKB1-212ENST00000600343 MEFVO15553 781 aaPredicted RBP11.26□□□□□ -0.61
NFKB1-212ENST00000600343 VSNL1P62760 191 aa11.26□□□□□ -0.61
NFKB1-212ENST00000600343 CCDC181Q5TID7 509 aa11.26□□□□□ -0.61
NFKB1-212ENST00000600343 CCDC12Q8WUD4 166 aaPredicted RBP11.26□□□□□ -0.61
NFKB1-212ENST00000600343 ARHGAP45Q92619 1136 aa11.26□□□□□ -0.61
NFKB1-212ENST00000600343 PUS7Q96PZ0 661 aaKnown RBP11.26□□□□□ -0.61
NFKB1-212ENST00000600343 LMCD1Q9NZU5 365 aa11.26□□□□□ -0.61
NFKB1-212ENST00000600343 CADPSQ9ULU8 1353 aa11.26□□□□□ -0.61
NFKB1-212ENST00000600343 EPB41L2O43491 1005 aaKnown RBP11.26□□□□□ -0.61
NFKB1-212ENST00000600343 CDKL5O76039 1030 aa11.26□□□□□ -0.61
NFKB1-212ENST00000600343 TMPOP42166 694 aaKnown RBP11.26□□□□□ -0.61
NFKB1-212ENST00000600343 LARP1BQ659C4 914 aaKnown RBP11.26□□□□□ -0.61
NFKB1-212ENST00000600343 LEO1Q8WVC0 666 aaPredicted RBP11.26□□□□□ -0.61
NFKB1-212ENST00000600343 IRX2Q9BZI1 471 aaPredicted RBP11.26□□□□□ -0.61
NFKB1-212ENST00000600343 TRIM35Q9UPQ4 493 aa11.26□□□□□ -0.61
NFKB1-212ENST00000600343 PPP2R2CQ9Y2T4 447 aa11.26□□□□□ -0.61
NFKB1-212ENST00000600343 SSH2Q76I76 1423 aa11.26□□□□□ -0.61
NFKB1-212ENST00000600343 ABCA10Q8WWZ4 1543 aa11.26□□□□□ -0.61
NFKB1-212ENST00000600343 GOLGA6L9A6NEM1 432 aa11.26□□□□□ -0.61
NFKB1-212ENST00000600343 PDHBP11177 359 aa11.26□□□□□ -0.61
NFKB1-212ENST00000600343 THEMIS2Q5TEJ8 643 aa11.26□□□□□ -0.61
NFKB1-212ENST00000600343 IL17RAQ96F46 866 aa11.26□□□□□ -0.61
NFKB1-212ENST00000600343 EHD4Q9H223 541 aa11.26□□□□□ -0.61
NFKB1-212ENST00000600343 BATF3Q9NR55 127 aa11.26□□□□□ -0.61
NFKB1-212ENST00000600343 KIF4BQ2VIQ3 1234 aa11.25□□□□□ -0.61
NFKB1-212ENST00000600343 FILIP1LQ4L180 1135 aa11.25□□□□□ -0.61
NFKB1-212ENST00000600343 CCDC50Q8IVM0 306 aa11.25□□□□□ -0.61
NFKB1-212ENST00000600343 MAB21L3Q8N8X9 362 aa11.25□□□□□ -0.61
NFKB1-212ENST00000600343 RILPL2Q969X0 211 aa11.25□□□□□ -0.61
NFKB1-212ENST00000600343 CAPS2Q9BXY5 557 aa11.25□□□□□ -0.61
NFKB1-212ENST00000600343 CUTAO60888 179 aa11.25□□□□□ -0.61
NFKB1-212ENST00000600343 AARSP49588 968 aaKnown RBP eCLIP11.25□□□□□ -0.61
NFKB1-212ENST00000600343 PDE1AP54750 535 aa11.25□□□□□ -0.61
NFKB1-212ENST00000600343 CDC37L1Q7L3B6 337 aa11.25□□□□□ -0.61
NFKB1-212ENST00000600343 NUP133Q8WUM0 1156 aa11.25□□□□□ -0.61
NFKB1-212ENST00000600343 ABCC4O15439 1325 aa11.25□□□□□ -0.61
NFKB1-212ENST00000600343 EIF3HO15372 352 aaKnown RBP eCLIP11.25□□□□□ -0.61
NFKB1-212ENST00000600343 RTN3O95197 1032 aaPredicted RBP11.25□□□□□ -0.61
NFKB1-212ENST00000600343 LARGE1O95461 756 aa11.25□□□□□ -0.61
NFKB1-212ENST00000600343 RANBP1P43487 201 aa11.25□□□□□ -0.61
NFKB1-212ENST00000600343 LAMB3Q13751 1172 aa11.25□□□□□ -0.61
NFKB1-212ENST00000600343 CAPRIN2Q6IMN6 1127 aaKnown RBP11.25□□□□□ -0.61
NFKB1-212ENST00000600343 FCHSD1Q86WN1 690 aa11.25□□□□□ -0.61
NFKB1-212ENST00000600343 TCP11Q8WWU5 503 aa11.25□□□□□ -0.61
NFKB1-212ENST00000600343 KIFC2Q96AC6 838 aa11.25□□□□□ -0.61
NFKB1-212ENST00000600343 LRRCC1Q9C099 1032 aa11.25□□□□□ -0.61
NFKB1-212ENST00000600343 TPCN1Q9ULQ1 816 aa11.25□□□□□ -0.61
NFKB1-212ENST00000600343 CUL7Q14999 1698 aa11.25□□□□□ -0.61
NFKB1-212ENST00000600343 PTCH1Q13635 1447 aa11.25□□□□□ -0.61
NFKB1-212ENST00000600343 ADGRL1O94910 1474 aa11.25□□□□□ -0.61
NFKB1-212ENST00000600343 RASSF9O75901 435 aa11.25□□□□□ -0.61
NFKB1-212ENST00000600343 GNGT1P63211 74 aa11.25□□□□□ -0.61
NFKB1-212ENST00000600343 NCAPG2Q86XI2 1143 aa11.25□□□□□ -0.61
NFKB1-212ENST00000600343 MRPL50Q8N5N7 158 aaKnown RBP11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms