RNA–Protein interactions for RNA: ENST00000589614.5

TREM1-204, Transcript of triggering receptor expressed on myeloid cells 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene TREM1, Length 772 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TREM1-204ENST00000589614 NBPF11Q86T75 865 aa12.56□□□□□ -0.4
TREM1-204ENST00000589614 IFNL1Q8IU54 200 aa12.56□□□□□ -0.4
TREM1-204ENST00000589614 GMLQ99445 158 aa12.56□□□□□ -0.4
TREM1-204ENST00000589614 TIMELESSQ9UNS1 1208 aa12.56□□□□□ -0.4
TREM1-204ENST00000589614 A0A1W2PPC1 479 aa12.55□□□□□ -0.4
TREM1-204ENST00000589614 ZBTB48P10074 688 aaPredicted RBP12.55□□□□□ -0.4
TREM1-204ENST00000589614 EIF4G2P78344 907 aaKnown RBP eCLIP12.55□□□□□ -0.4
TREM1-204ENST00000589614 PTPN12Q05209 780 aaKnown RBP12.55□□□□□ -0.4
TREM1-204ENST00000589614 HSP90AB3PQ58FF7 597 aa12.55□□□□□ -0.4
TREM1-204ENST00000589614 LDLRAD1Q5T700 205 aa12.55□□□□□ -0.4
TREM1-204ENST00000589614 ARMC9Q7Z3E5 817 aa12.55□□□□□ -0.4
TREM1-204ENST00000589614 TBC1D16Q8TBP0 767 aa12.55□□□□□ -0.4
TREM1-204ENST00000589614 CD99L2Q8TCZ2 262 aa12.55□□□□□ -0.4
TREM1-204ENST00000589614 PNISRQ8TF01 805 aaKnown RBP12.55□□□□□ -0.4
TREM1-204ENST00000589614 ZC3H12CQ9C0D7 883 aaKnown RBP12.55□□□□□ -0.4
TREM1-204ENST00000589614 SH3TC1Q8TE82 1336 aa12.55□□□□□ -0.4
TREM1-204ENST00000589614 ZNF646O15015 1829 aaPredicted RBP12.54□□□□□ -0.4
TREM1-204ENST00000589614 PYGBP11216 843 aa12.54□□□□□ -0.4
TREM1-204ENST00000589614 GPSM2P81274 684 aa12.54□□□□□ -0.4
TREM1-204ENST00000589614 PRAMEF18Q5VWM3 479 aa12.54□□□□□ -0.4
TREM1-204ENST00000589614 NLRP10Q86W26 655 aa12.54□□□□□ -0.4
TREM1-204ENST00000589614 STK24Q9Y6E0 443 aa12.54□□□□□ -0.4
TREM1-204ENST00000589614 IGF2BP3O00425 579 aaKnown RBP eCLIP12.53□□□□□ -0.4
TREM1-204ENST00000589614 EIF4A1P60842 406 aaKnown RBP12.53□□□□□ -0.4
TREM1-204ENST00000589614 SP3Q02447 781 aa12.53□□□□□ -0.4
TREM1-204ENST00000589614 DCTN1Q14203 1278 aa12.53□□□□□ -0.4
TREM1-204ENST00000589614 SLC4A8Q2Y0W8 1093 aa12.53□□□□□ -0.4
TREM1-204ENST00000589614 SLC9C1Q4G0N8 1177 aa12.53□□□□□ -0.4
TREM1-204ENST00000589614 LRP10Q7Z4F1 713 aa12.53□□□□□ -0.4
TREM1-204ENST00000589614 CELF1Q92879 486 aaKnown RBP12.53□□□□□ -0.4
TREM1-204ENST00000589614 MIS18AQ9NYP9 233 aa12.53□□□□□ -0.4
TREM1-204ENST00000589614 PODXL2Q9NZ53 605 aa12.53□□□□□ -0.4
TREM1-204ENST00000589614 TRMT112Q9UI30 125 aaKnown RBP12.53□□□□□ -0.4
TREM1-204ENST00000589614 DLG5Q8TDM6 1919 aa12.52□□□□□ -0.4
TREM1-204ENST00000589614 PITPNM1O00562 1244 aa12.52□□□□□ -0.41
TREM1-204ENST00000589614 ARHGEF6Q15052 776 aa12.52□□□□□ -0.41
TREM1-204ENST00000589614 SF3B3Q15393 1217 aaKnown RBP12.52□□□□□ -0.41
TREM1-204ENST00000589614 NBPF9Q3BBW0 867 aa12.52□□□□□ -0.41
TREM1-204ENST00000589614 SCAF8Q9UPN6 1271 aaKnown RBP12.52□□□□□ -0.41
TREM1-204ENST00000589614 SPTBN5Q9NRC6 3674 aaKnown RBP12.52□□□□□ -0.41
TREM1-204ENST00000589614 UNCXA6NJT0 531 aa12.51□□□□□ -0.41
TREM1-204ENST00000589614 G3V3G9 751 aa12.51□□□□□ -0.41
TREM1-204ENST00000589614 PER1O15534 1290 aaPredicted RBP12.51□□□□□ -0.41
TREM1-204ENST00000589614 HSPA5P11021 654 aaKnown RBP12.51□□□□□ -0.41
TREM1-204ENST00000589614 CRHR2Q13324 411 aa12.51□□□□□ -0.41
TREM1-204ENST00000589614 OTUD7BQ6GQQ9 843 aa12.51□□□□□ -0.41
TREM1-204ENST00000589614 COL4A1P02462 1669 aa12.51□□□□□ -0.41
TREM1-204ENST00000589614 MMP14P50281 582 aa12.5□□□□□ -0.41
TREM1-204ENST00000589614 MAP3K11Q16584 847 aa12.5□□□□□ -0.41
TREM1-204ENST00000589614 PODNQ7Z5L7 613 aa12.5□□□□□ -0.41
TREM1-204ENST00000589614 COL1A1P02452 1464 aaPredicted RBP12.49□□□□□ -0.41
TREM1-204ENST00000589614 USP17L3A6NCW0 530 aa12.49□□□□□ -0.41
TREM1-204ENST00000589614 USP17L4A6NCW7 530 aa12.49□□□□□ -0.41
TREM1-204ENST00000589614 WNT10BO00744 389 aa12.49□□□□□ -0.41
TREM1-204ENST00000589614 CAP1Q01518 475 aa12.49□□□□□ -0.41
TREM1-204ENST00000589614 PDIA6Q15084 440 aa12.49□□□□□ -0.41
TREM1-204ENST00000589614 CC2D1BQ5T0F9 858 aaKnown RBP12.49□□□□□ -0.41
TREM1-204ENST00000589614 GPR153Q6NV75 609 aa12.49□□□□□ -0.41
TREM1-204ENST00000589614 USP17L1Q7RTZ2 530 aa12.49□□□□□ -0.41
TREM1-204ENST00000589614 DPF3Q92784 378 aa12.49□□□□□ -0.41
TREM1-204ENST00000589614 SLC10A4Q96EP9 437 aa12.49□□□□□ -0.41
TREM1-204ENST00000589614 RYDENQ9NUL5 291 aaKnown RBP12.49□□□□□ -0.41
TREM1-204ENST00000589614 ANGEL1Q9UNK9 670 aaKnown RBP12.49□□□□□ -0.41
TREM1-204ENST00000589614 PTCH2Q9Y6C5 1203 aa12.49□□□□□ -0.41
TREM1-204ENST00000589614 RPS8P62241 208 aaKnown RBP12.48□□□□□ -0.41
TREM1-204ENST00000589614 ANKRD13DQ6ZTN6 518 aa12.48□□□□□ -0.41
TREM1-204ENST00000589614 APOBEC3FQ8IUX4 373 aaKnown RBP12.48□□□□□ -0.41
TREM1-204ENST00000589614 OGFOD1Q8N543 542 aa12.48□□□□□ -0.41
TREM1-204ENST00000589614 WNK4Q96J92 1243 aa12.48□□□□□ -0.41
TREM1-204ENST00000589614 HTATIP2Q9BUP3 242 aa12.48□□□□□ -0.41
TREM1-204ENST00000589614 NUDCQ9Y266 331 aa12.48□□□□□ -0.41
TREM1-204ENST00000589614 NR2E3Q9Y5X4 410 aa12.48□□□□□ -0.41
TREM1-204ENST00000589614 ECM29Q5VYK3 1845 aa12.47□□□□□ -0.41
TREM1-204ENST00000589614 TESPA1A2RU30 521 aaPredicted RBP12.47□□□□□ -0.41
TREM1-204ENST00000589614 UFL1O94874 794 aa12.47□□□□□ -0.41
TREM1-204ENST00000589614 PRKG1Q13976 671 aa12.47□□□□□ -0.41
TREM1-204ENST00000589614 THUMPD2Q9BTF0 503 aaKnown RBP12.47□□□□□ -0.41
TREM1-204ENST00000589614 COL25A1Q9BXS0 654 aaPredicted RBP12.47□□□□□ -0.41
TREM1-204ENST00000589614 GGA1Q9UJY5 639 aa12.47□□□□□ -0.41
TREM1-204ENST00000589614 MYO3BQ8WXR4 1341 aa12.46□□□□□ -0.41
TREM1-204ENST00000589614 WTIPA6NIX2 430 aaPredicted RBP12.46□□□□□ -0.41
TREM1-204ENST00000589614 SOX1O00570 391 aaPredicted RBP12.46□□□□□ -0.41
TREM1-204ENST00000589614 PPP1R12BO60237 982 aaPredicted RBP12.46□□□□□ -0.41
TREM1-204ENST00000589614 CFAP53Q96M91 514 aa12.46□□□□□ -0.41
TREM1-204ENST00000589614 ANKIB1Q9P2G1 1089 aa12.46□□□□□ -0.41
TREM1-204ENST00000589614 COPS6Q7L5N1 327 aa12.45□□□□□ -0.42
TREM1-204ENST00000589614 UBE2Q1Q7Z7E8 422 aa12.45□□□□□ -0.42
TREM1-204ENST00000589614 NKX2-3Q8TAU0 364 aa12.45□□□□□ -0.42
TREM1-204ENST00000589614 SHISA4Q96DD7 197 aa12.45□□□□□ -0.42
TREM1-204ENST00000589614 LRCH3Q96II8 777 aa12.45□□□□□ -0.42
TREM1-204ENST00000589614 PTPN18Q99952 460 aa12.45□□□□□ -0.42
TREM1-204ENST00000589614 STXBP5LQ9Y2K9 1186 aa12.45□□□□□ -0.42
TREM1-204ENST00000589614 MUC3AQ02505 3323 aa12.44□□□□□ -0.42
TREM1-204ENST00000589614 ZBTB7BO15156 539 aaPredicted RBP12.44□□□□□ -0.42
TREM1-204ENST00000589614 U2AF1L5P0DN76 240 aaPredicted RBP12.44□□□□□ -0.42
TREM1-204ENST00000589614 U2AF1Q01081 240 aaKnown RBP eCLIP12.44□□□□□ -0.42
TREM1-204ENST00000589614 PROSER3Q2NL68 480 aa12.44□□□□□ -0.42
TREM1-204ENST00000589614 DACT2Q5SW24 774 aa12.44□□□□□ -0.42
TREM1-204ENST00000589614 CLMNQ96JQ2 1002 aa12.44□□□□□ -0.42
TREM1-204ENST00000589614 TTC28Q96AY4 2481 aa12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms