RNA–Protein interactions for RNA: ENST00000584112.1

CCDC47-206, Transcript of coiled-coil domain containing 47, humanhuman

TSL 2

Gene CCDC47, Length 588 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-206ENST00000584112 RBM17Q96I25 401 aaKnown RBP14.49□□□□□ -0.09
CCDC47-206ENST00000584112 ZBTB3Q9H5J0 574 aa14.49□□□□□ -0.09
CCDC47-206ENST00000584112 CHL1O00533 1208 aa14.48□□□□□ -0.09
CCDC47-206ENST00000584112 BMP8BP34820 402 aa14.48□□□□□ -0.09
CCDC47-206ENST00000584112 PRKG1Q13976 671 aa14.48□□□□□ -0.09
CCDC47-206ENST00000584112 GIGYF2Q6Y7W6 1299 aaKnown RBP14.48□□□□□ -0.09
CCDC47-206ENST00000584112 TRIM35Q9UPQ4 493 aa14.48□□□□□ -0.09
CCDC47-206ENST00000584112 ZNF646O15015 1829 aaPredicted RBP14.48□□□□□ -0.09
CCDC47-206ENST00000584112 TCIRG1Q13488 830 aa14.47□□□□□ -0.09
CCDC47-206ENST00000584112 PARP10Q53GL7 1025 aa14.47□□□□□ -0.09
CCDC47-206ENST00000584112 MAFAQ8NHW3 353 aaPredicted RBP14.47□□□□□ -0.09
CCDC47-206ENST00000584112 DBNDD1Q9H9R9 158 aa14.47□□□□□ -0.09
CCDC47-206ENST00000584112 LAS1LQ9Y4W2 734 aaKnown RBP14.47□□□□□ -0.09
CCDC47-206ENST00000584112 BDP1A6H8Y1 2624 aa14.47□□□□□ -0.09
CCDC47-206ENST00000584112 CACNA1FO60840 1977 aa14.46□□□□□ -0.09
CCDC47-206ENST00000584112 GPTP24298 496 aa14.46□□□□□ -0.09
CCDC47-206ENST00000584112 PDIA6Q15084 440 aa14.46□□□□□ -0.09
CCDC47-206ENST00000584112 PPP1R42Q7Z4L9 355 aa14.46□□□□□ -0.09
CCDC47-206ENST00000584112 ZNF34Q8IZ26 560 aa14.46□□□□□ -0.09
CCDC47-206ENST00000584112 CNKSR2Q8WXI2 1034 aa14.46□□□□□ -0.09
CCDC47-206ENST00000584112 RTL9Q8NET4 1388 aa14.46□□□□□ -0.1
CCDC47-206ENST00000584112 UBN2Q6ZU65 1347 aa14.45□□□□□ -0.1
CCDC47-206ENST00000584112 MANSC4A6NHS7 340 aaPredicted RBP14.45□□□□□ -0.1
CCDC47-206ENST00000584112 HOXB7P09629 217 aa14.45□□□□□ -0.1
CCDC47-206ENST00000584112 HSP90AB3PQ58FF7 597 aa14.45□□□□□ -0.1
CCDC47-206ENST00000584112 LRP10Q7Z4F1 713 aa14.45□□□□□ -0.1
CCDC47-206ENST00000584112 TMX4Q9H1E5 349 aaPredicted RBP14.45□□□□□ -0.1
CCDC47-206ENST00000584112 ZMYND8Q9ULU4 1186 aaPredicted RBP14.45□□□□□ -0.1
CCDC47-206ENST00000584112 FZD1Q9UP38 647 aa14.45□□□□□ -0.1
CCDC47-206ENST00000584112 DUOX1Q9NRD9 1551 aa14.44□□□□□ -0.1
CCDC47-206ENST00000584112 NPM3O75607 178 aaKnown RBP14.44□□□□□ -0.1
CCDC47-206ENST00000584112 FARP2O94887 1054 aaPredicted RBP14.44□□□□□ -0.1
CCDC47-206ENST00000584112 RPS12P25398 132 aaKnown RBP14.44□□□□□ -0.1
CCDC47-206ENST00000584112 CALD1Q05682 793 aaKnown RBP14.44□□□□□ -0.1
CCDC47-206ENST00000584112 SUSD4Q5VX71 490 aa14.44□□□□□ -0.1
CCDC47-206ENST00000584112 NECTIN2Q92692 538 aa14.44□□□□□ -0.1
CCDC47-206ENST00000584112 DDX60Q8IY21 1712 aaKnown RBP14.44□□□□□ -0.1
CCDC47-206ENST00000584112 SCN9AQ15858 1988 aa14.43□□□□□ -0.1
CCDC47-206ENST00000584112 MUC6Q6W4X9 2439 aa14.43□□□□□ -0.1
CCDC47-206ENST00000584112 NTSR2O95665 410 aa14.43□□□□□ -0.1
CCDC47-206ENST00000584112 ANXA1P04083 346 aa14.43□□□□□ -0.1
CCDC47-206ENST00000584112 GJA8P48165 433 aa14.43□□□□□ -0.1
CCDC47-206ENST00000584112 PROSER3Q2NL68 480 aa14.43□□□□□ -0.1
CCDC47-206ENST00000584112 ALYREFQ86V81 257 aaKnown RBP14.43□□□□□ -0.1
CCDC47-206ENST00000584112 TDHQ8IZJ6 230 aa14.43□□□□□ -0.1
CCDC47-206ENST00000584112 POTEB2H3BUK9 544 aa14.42□□□□□ -0.1
CCDC47-206ENST00000584112 APAF1O14727 1248 aa14.42□□□□□ -0.1
CCDC47-206ENST00000584112 AIMP1Q12904 312 aaKnown RBP14.42□□□□□ -0.1
CCDC47-206ENST00000584112 HDGFL1Q5TGJ6 251 aa14.42□□□□□ -0.1
CCDC47-206ENST00000584112 COPS6Q7L5N1 327 aa14.42□□□□□ -0.1
CCDC47-206ENST00000584112 XAGE3Q8WTP9 111 aa14.42□□□□□ -0.1
CCDC47-206ENST00000584112 UTP14AQ9BVJ6 771 aaKnown RBP14.42□□□□□ -0.1
CCDC47-206ENST00000584112 ARHGAP39Q9C0H5 1083 aa14.42□□□□□ -0.1
CCDC47-206ENST00000584112 CDH23Q9H251 3354 aa14.42□□□□□ -0.1
CCDC47-206ENST00000584112 ABCC4O15439 1325 aa14.41□□□□□ -0.1
CCDC47-206ENST00000584112 INHBEP58166 350 aa14.41□□□□□ -0.1
CCDC47-206ENST00000584112 GNAI1P63096 354 aa14.41□□□□□ -0.1
CCDC47-206ENST00000584112 KRT24Q2M2I5 525 aa14.41□□□□□ -0.1
CCDC47-206ENST00000584112 NLRP3Q96P20 1036 aa14.41□□□□□ -0.1
CCDC47-206ENST00000584112 IFT57Q9NWB7 429 aa14.41□□□□□ -0.1
CCDC47-206ENST00000584112 CHPF2Q9P2E5 772 aa14.41□□□□□ -0.1
CCDC47-206ENST00000584112 LAMB1P07942 1786 aa14.4□□□□□ -0.1
CCDC47-206ENST00000584112 RIMBP2O15034 1052 aa14.4□□□□□ -0.1
CCDC47-206ENST00000584112 MAGEA10P43363 369 aaPredicted RBP14.4□□□□□ -0.1
CCDC47-206ENST00000584112 DOK7Q18PE1 504 aa14.4□□□□□ -0.1
CCDC47-206ENST00000584112 LDLRAD1Q5T700 205 aa14.4□□□□□ -0.1
CCDC47-206ENST00000584112 NKX2-3Q8TAU0 364 aa14.4□□□□□ -0.1
CCDC47-206ENST00000584112 CDX2Q99626 313 aaPredicted RBP14.4□□□□□ -0.1
CCDC47-206ENST00000584112 PTPN18Q99952 460 aa14.4□□□□□ -0.1
CCDC47-206ENST00000584112 MBIPQ9NS73 344 aa14.4□□□□□ -0.1
CCDC47-206ENST00000584112 DBF4Q9UBU7 674 aaPredicted RBP14.4□□□□□ -0.1
CCDC47-206ENST00000584112 MYH3P11055 1940 aa14.39□□□□□ -0.11
CCDC47-206ENST00000584112 GJB1P08034 283 aa14.39□□□□□ -0.11
CCDC47-206ENST00000584112 ZNF853P0CG23 659 aa14.39□□□□□ -0.11
CCDC47-206ENST00000584112 CCL5P13501 91 aa14.39□□□□□ -0.11
CCDC47-206ENST00000584112 SYN1P17600 705 aa14.39□□□□□ -0.11
CCDC47-206ENST00000584112 TJAP1Q5JTD0 557 aa14.39□□□□□ -0.11
CCDC47-206ENST00000584112 DUSP27Q5VZP5 1158 aa14.39□□□□□ -0.11
CCDC47-206ENST00000584112 SP8Q8IXZ3 490 aa14.39□□□□□ -0.11
CCDC47-206ENST00000584112 C7orf61Q8IZ16 206 aa14.39□□□□□ -0.11
CCDC47-206ENST00000584112 WNK4Q96J92 1243 aa14.39□□□□□ -0.11
CCDC47-206ENST00000584112 CLMNQ96JQ2 1002 aa14.39□□□□□ -0.11
CCDC47-206ENST00000584112 HYPKQ9NX55 129 aa14.39□□□□□ -0.11
CCDC47-206ENST00000584112 ECE2O60344 883 aa14.38□□□□□ -0.11
CCDC47-206ENST00000584112 SLC10A5Q5PT55 438 aa14.38□□□□□ -0.11
CCDC47-206ENST00000584112 FAM109BQ6ICB4 259 aaPredicted RBP14.38□□□□□ -0.11
CCDC47-206ENST00000584112 ARMC9Q7Z3E5 817 aa14.38□□□□□ -0.11
CCDC47-206ENST00000584112 NLRP10Q86W26 655 aa14.38□□□□□ -0.11
CCDC47-206ENST00000584112 PLBD2Q8NHP8 589 aa14.38□□□□□ -0.11
CCDC47-206ENST00000584112 CHMP4AQ9BY43 222 aa14.38□□□□□ -0.11
CCDC47-206ENST00000584112 ANGEL1Q9UNK9 670 aaKnown RBP14.38□□□□□ -0.11
CCDC47-206ENST00000584112 ZNF316A6NFI3 1004 aaPredicted RBP14.37□□□□□ -0.11
CCDC47-206ENST00000584112 ZNF280AP59817 542 aaPredicted RBP14.37□□□□□ -0.11
CCDC47-206ENST00000584112 SLC10A4Q96EP9 437 aa14.37□□□□□ -0.11
CCDC47-206ENST00000584112 RNF208Q9H0X6 261 aa14.37□□□□□ -0.11
CCDC47-206ENST00000584112 TRMT112Q9UI30 125 aaKnown RBP14.37□□□□□ -0.11
CCDC47-206ENST00000584112 LRRC37AA6NMS7 1700 aa14.37□□□□□ -0.11
CCDC47-206ENST00000584112 VIL1P09327 827 aaKnown RBP14.36□□□□□ -0.11
CCDC47-206ENST00000584112 NF2P35240 595 aa14.36□□□□□ -0.11
CCDC47-206ENST00000584112 GJA5P36382 358 aa14.36□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms