RNA–Protein interactions for RNA: ENST00000583705.1

MSI2-217, Transcript of musashi RNA binding protein 2, humanhuman

Gene MSI2, Length 7,612 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSI2-217ENST00000583705 SCAND2PQ9GZW5 306 aaPredicted RBP12.8□□□□□ -0.36
MSI2-217ENST00000583705 RPAP2Q8IXW5 612 aaPredicted RBP12.79□□□□□ -0.36
MSI2-217ENST00000583705 NECAB1Q8N987 351 aa12.79□□□□□ -0.36
MSI2-217ENST00000583705 RRP36Q96EU6 259 aaKnown RBP12.79□□□□□ -0.36
MSI2-217ENST00000583705 DBF4Q9UBU7 674 aaPredicted RBP12.79□□□□□ -0.36
MSI2-217ENST00000583705 MKRN1Q9UHC7 482 aaKnown RBP12.79□□□□□ -0.36
MSI2-217ENST00000583705 ATP6V0A2Q9Y487 856 aa12.79□□□□□ -0.36
MSI2-217ENST00000583705 KIF5AQ12840 1032 aa12.79□□□□□ -0.36
MSI2-217ENST00000583705 FCHSD1Q86WN1 690 aa12.79□□□□□ -0.36
MSI2-217ENST00000583705 NEK1Q96PY6 1258 aa12.79□□□□□ -0.36
MSI2-217ENST00000583705 ALG1Q9BT22 464 aa12.79□□□□□ -0.36
MSI2-217ENST00000583705 FAM160A1Q05DH4 1040 aa12.79□□□□□ -0.36
MSI2-217ENST00000583705 STX1AQ16623 288 aa12.79□□□□□ -0.36
MSI2-217ENST00000583705 EVI5LQ96CN4 794 aa12.79□□□□□ -0.36
MSI2-217ENST00000583705 EMILIN1Q9Y6C2 1016 aa12.79□□□□□ -0.36
MSI2-217ENST00000583705 NOL3O60936 208 aaKnown RBP12.79□□□□□ -0.36
MSI2-217ENST00000583705 GNG11P61952 73 aa12.79□□□□□ -0.36
MSI2-217ENST00000583705 MAGEB6Q8N7X4 407 aa12.79□□□□□ -0.36
MSI2-217ENST00000583705 DHX58Q96C10 678 aa12.79□□□□□ -0.36
MSI2-217ENST00000583705 ZBTB43O43298 467 aa12.78□□□□□ -0.36
MSI2-217ENST00000583705 TBC1D31Q96DN5 1066 aa12.78□□□□□ -0.36
MSI2-217ENST00000583705 TCEANC2Q96MN5 208 aa12.78□□□□□ -0.36
MSI2-217ENST00000583705 FNBP1Q96RU3 617 aa12.78□□□□□ -0.36
MSI2-217ENST00000583705 CACYBPQ9HB71 228 aaKnown RBP12.78□□□□□ -0.36
MSI2-217ENST00000583705 LRPPRCP42704 1394 aaKnown RBP12.78□□□□□ -0.36
MSI2-217ENST00000583705 SYKP43405 635 aa12.78□□□□□ -0.36
MSI2-217ENST00000583705 DDB1Q16531 1140 aa12.78□□□□□ -0.36
MSI2-217ENST00000583705 DNAJC21Q5F1R6 531 aaKnown RBP12.78□□□□□ -0.36
MSI2-217ENST00000583705 CCDC102BQ68D86 513 aa12.78□□□□□ -0.36
MSI2-217ENST00000583705 RXRAP19793 462 aa12.78□□□□□ -0.36
MSI2-217ENST00000583705 SLC8A3P57103 927 aa12.78□□□□□ -0.36
MSI2-217ENST00000583705 TTC30BQ8N4P2 665 aa12.78□□□□□ -0.36
MSI2-217ENST00000583705 IRAK4Q9NWZ3 460 aa12.78□□□□□ -0.36
MSI2-217ENST00000583705 DMRT2Q9Y5R5 561 aa12.78□□□□□ -0.36
MSI2-217ENST00000583705 ATP2A1O14983 1001 aa12.78□□□□□ -0.36
MSI2-217ENST00000583705 HSPA1LP34931 641 aa12.78□□□□□ -0.36
MSI2-217ENST00000583705 SNW1Q13573 536 aaKnown RBP12.78□□□□□ -0.36
MSI2-217ENST00000583705 TRIM7Q9C029 511 aa12.78□□□□□ -0.36
MSI2-217ENST00000583705 TSTA3Q13630 321 aaPredicted RBP12.78□□□□□ -0.36
MSI2-217ENST00000583705 ZKSCAN3Q9BRR0 538 aa12.78□□□□□ -0.36
MSI2-217ENST00000583705 PRG4Q92954 1404 aaPredicted RBP12.77□□□□□ -0.36
MSI2-217ENST00000583705 MSANTD4Q8NCY6 345 aa12.77□□□□□ -0.36
MSI2-217ENST00000583705 TEX13AQ9BXU3 409 aaPredicted RBP12.77□□□□□ -0.36
MSI2-217ENST00000583705 SLC52A1Q9NWF4 448 aa12.77□□□□□ -0.36
MSI2-217ENST00000583705 PI4KAP2A4QPH2 592 aa12.77□□□□□ -0.36
MSI2-217ENST00000583705 MCM5P33992 734 aa12.77□□□□□ -0.36
MSI2-217ENST00000583705 UBASH3AP57075 661 aa12.77□□□□□ -0.36
MSI2-217ENST00000583705 PI4KAP1Q8N8J0 262 aa12.77□□□□□ -0.36
MSI2-217ENST00000583705 LIMCH1Q9UPQ0 1083 aa12.77□□□□□ -0.36
MSI2-217ENST00000583705 DYNC1I1O14576 645 aa12.77□□□□□ -0.37
MSI2-217ENST00000583705 SKAP1Q86WV1 359 aa12.77□□□□□ -0.37
MSI2-217ENST00000583705 GTPBP4Q9BZE4 634 aaKnown RBP12.77□□□□□ -0.37
MSI2-217ENST00000583705 SH2B1Q9NRF2 756 aaPredicted RBP12.77□□□□□ -0.37
MSI2-217ENST00000583705 RBM27Q9P2N5 1060 aaKnown RBP12.77□□□□□ -0.37
MSI2-217ENST00000583705 TLDC2A0PJX2 215 aa12.77□□□□□ -0.37
MSI2-217ENST00000583705 ZCRB1Q8TBF4 217 aaKnown RBP12.77□□□□□ -0.37
MSI2-217ENST00000583705 RMND1Q9NWS8 449 aa12.77□□□□□ -0.37
MSI2-217ENST00000583705 BRDTQ58F21 947 aaPredicted RBP12.77□□□□□ -0.37
MSI2-217ENST00000583705 IFT81Q8WYA0 676 aa12.77□□□□□ -0.37
MSI2-217ENST00000583705 SEC62Q99442 399 aaKnown RBP12.77□□□□□ -0.37
MSI2-217ENST00000583705 NOC2LQ9Y3T9 749 aaKnown RBP12.77□□□□□ -0.37
MSI2-217ENST00000583705 ESR2Q92731 530 aa12.77□□□□□ -0.37
MSI2-217ENST00000583705 ANKFY1Q9P2R3 1169 aa12.77□□□□□ -0.37
MSI2-217ENST00000583705 KRT19P08727 400 aa12.76□□□□□ -0.37
MSI2-217ENST00000583705 TTC30AQ86WT1 665 aa12.76□□□□□ -0.37
MSI2-217ENST00000583705 KRT23Q9C075 422 aa12.76□□□□□ -0.37
MSI2-217ENST00000583705 CCDC24Q8N4L8 307 aa12.76□□□□□ -0.37
MSI2-217ENST00000583705 ATRIPQ8WXE1 791 aa12.76□□□□□ -0.37
MSI2-217ENST00000583705 VPS52Q8N1B4 723 aa12.76□□□□□ -0.37
MSI2-217ENST00000583705 DDX12PQ92771 950 aa12.76□□□□□ -0.37
MSI2-217ENST00000583705 M0QZ92 97 aa12.76□□□□□ -0.37
MSI2-217ENST00000583705 CTAGE5O15320 804 aa12.76□□□□□ -0.37
MSI2-217ENST00000583705 KANK3Q6NY19 840 aa12.76□□□□□ -0.37
MSI2-217ENST00000583705 FAM83GA6ND36 823 aa12.76□□□□□ -0.37
MSI2-217ENST00000583705 DZIP3Q86Y13 1208 aaKnown RBP12.76□□□□□ -0.37
MSI2-217ENST00000583705 TACC3Q9Y6A5 838 aa12.76□□□□□ -0.37
MSI2-217ENST00000583705 TCP10Q12799 353 aa12.75□□□□□ -0.37
MSI2-217ENST00000583705 KIAA1524Q8TCG1 905 aa12.75□□□□□ -0.37
MSI2-217ENST00000583705 GOLGA6L9A6NEM1 432 aa12.75□□□□□ -0.37
MSI2-217ENST00000583705 GNPATO15228 680 aa12.75□□□□□ -0.37
MSI2-217ENST00000583705 XRCC6P12956 609 aaKnown RBP eCLIP12.75□□□□□ -0.37
MSI2-217ENST00000583705 TRPC3Q13507 836 aa12.75□□□□□ -0.37
MSI2-217ENST00000583705 GIPC1O14908 333 aa12.75□□□□□ -0.37
MSI2-217ENST00000583705 HGSO14964 777 aaPredicted RBP12.75□□□□□ -0.37
MSI2-217ENST00000583705 STX17P56962 302 aa12.75□□□□□ -0.37
MSI2-217ENST00000583705 NYXQ9GZU5 481 aa12.75□□□□□ -0.37
MSI2-217ENST00000583705 CUX1P39880 1505 aa12.75□□□□□ -0.37
MSI2-217ENST00000583705 CPXCR1Q8N123 301 aa12.75□□□□□ -0.37
MSI2-217ENST00000583705 SSFA2P28290 1259 aa12.75□□□□□ -0.37
MSI2-217ENST00000583705 WDR44Q5JSH3 913 aa12.75□□□□□ -0.37
MSI2-217ENST00000583705 SLC9C2Q5TAH2 1124 aa12.75□□□□□ -0.37
MSI2-217ENST00000583705 FAM204AQ9H8W3 233 aa12.75□□□□□ -0.37
MSI2-217ENST00000583705 STX10O60499 249 aa12.75□□□□□ -0.37
MSI2-217ENST00000583705 FBLN1P23142 703 aa12.75□□□□□ -0.37
MSI2-217ENST00000583705 TCIRG1Q13488 830 aa12.75□□□□□ -0.37
MSI2-217ENST00000583705 USH1GQ495M9 461 aa12.75□□□□□ -0.37
MSI2-217ENST00000583705 ANKRD13DQ6ZTN6 518 aa12.75□□□□□ -0.37
MSI2-217ENST00000583705 GPIHBP1Q8IV16 184 aa12.75□□□□□ -0.37
MSI2-217ENST00000583705 SMCR8Q8TEV9 937 aaPredicted RBP12.75□□□□□ -0.37
MSI2-217ENST00000583705 RUSC2Q8N2Y8 1516 aa12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms