RNA–Protein interactions for RNA: ENST00000582788.5

ERBB2-212, Transcript of erb-b2 receptor tyrosine kinase 2, humanhuman

TSL 5

Gene ERBB2, Length 2,004 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB2-212ENST00000582788 ADORA1P30542 326 aa20.56■□□□□ 0.88
ERBB2-212ENST00000582788 METTL24Q5JXM2 366 aa20.56■□□□□ 0.88
ERBB2-212ENST00000582788 PKNOX2Q96KN3 472 aa20.56■□□□□ 0.88
ERBB2-212ENST00000582788 BCL2L12Q9HB09 334 aa20.56■□□□□ 0.88
ERBB2-212ENST00000582788 CNNM1Q9NRU3 951 aa20.56■□□□□ 0.88
ERBB2-212ENST00000582788 LRP5O75197 1615 aa20.56■□□□□ 0.88
ERBB2-212ENST00000582788 GNPATO15228 680 aa20.55■□□□□ 0.88
ERBB2-212ENST00000582788 LAMB2P55268 1798 aa20.55■□□□□ 0.88
ERBB2-212ENST00000582788 DDX46Q7L014 1031 aaKnown RBP20.55■□□□□ 0.88
ERBB2-212ENST00000582788 XAGE2Q96GT9 111 aa20.55■□□□□ 0.88
ERBB2-212ENST00000582788 CCDC183Q5T5S1 534 aa20.54■□□□□ 0.88
ERBB2-212ENST00000582788 AMIGO3Q86WK7 504 aa20.54■□□□□ 0.88
ERBB2-212ENST00000582788 VGLL2Q8N8G2 317 aa20.54■□□□□ 0.88
ERBB2-212ENST00000582788 CNPY2Q9Y2B0 182 aa20.54■□□□□ 0.88
ERBB2-212ENST00000582788 ZSCAN21Q9Y5A6 473 aaPredicted RBP20.54■□□□□ 0.88
ERBB2-212ENST00000582788 RFX7Q2KHR2 1363 aa20.54■□□□□ 0.88
ERBB2-212ENST00000582788 MED23Q9ULK4 1368 aa20.54■□□□□ 0.88
ERBB2-212ENST00000582788 CCDC171Q6TFL3 1326 aa20.54■□□□□ 0.88
ERBB2-212ENST00000582788 STX6O43752 255 aa20.54■□□□□ 0.88
ERBB2-212ENST00000582788 CHGBP05060 677 aa20.54■□□□□ 0.88
ERBB2-212ENST00000582788 IFIT1P09914 478 aaKnown RBP20.54■□□□□ 0.88
ERBB2-212ENST00000582788 SYT1P21579 422 aa20.54■□□□□ 0.88
ERBB2-212ENST00000582788 CSPP1Q1MSJ5 1256 aa20.54■□□□□ 0.88
ERBB2-212ENST00000582788 FAM184AQ8NB25 1140 aa20.54■□□□□ 0.88
ERBB2-212ENST00000582788 BCL11BQ9C0K0 894 aaPredicted RBP20.54■□□□□ 0.88
ERBB2-212ENST00000582788 NARFQ9UHQ1 456 aa20.54■□□□□ 0.88
ERBB2-212ENST00000582788 EP400Q96L91 3159 aa20.54■□□□□ 0.88
ERBB2-212ENST00000582788 USPL1Q5W0Q7 1092 aa20.53■□□□□ 0.88
ERBB2-212ENST00000582788 KBTBD3Q8NAB2 608 aa20.53■□□□□ 0.88
ERBB2-212ENST00000582788 KCNB2Q92953 911 aa20.53■□□□□ 0.88
ERBB2-212ENST00000582788 SEC31BQ9NQW1 1179 aa20.53■□□□□ 0.88
ERBB2-212ENST00000582788 PAG1Q9NWQ8 432 aa20.53■□□□□ 0.88
ERBB2-212ENST00000582788 SRP68Q9UHB9 627 aaKnown RBP20.53■□□□□ 0.88
ERBB2-212ENST00000582788 R3HCC1Q9Y3T6 440 aaKnown RBP20.53■□□□□ 0.88
ERBB2-212ENST00000582788 GOLIM4O00461 696 aa20.53■□□□□ 0.88
ERBB2-212ENST00000582788 RGL2O15211 777 aa20.53■□□□□ 0.88
ERBB2-212ENST00000582788 ATP2B3Q16720 1220 aa20.53■□□□□ 0.88
ERBB2-212ENST00000582788 UVSSAQ2YD98 709 aa20.53■□□□□ 0.88
ERBB2-212ENST00000582788 TBC1D9BQ66K14 1250 aa20.53■□□□□ 0.88
ERBB2-212ENST00000582788 KRT27Q7Z3Y8 459 aa20.53■□□□□ 0.88
ERBB2-212ENST00000582788 PPIL4Q8WUA2 492 aaKnown RBP eCLIP20.53■□□□□ 0.88
ERBB2-212ENST00000582788 F13A1P00488 732 aa20.52■□□□□ 0.88
ERBB2-212ENST00000582788 CASTP20810 708 aaKnown RBP20.52■□□□□ 0.88
ERBB2-212ENST00000582788 CCDC158Q5M9N0 1113 aa20.52■□□□□ 0.88
ERBB2-212ENST00000582788 ZNF589Q86UQ0 364 aaPredicted RBP20.52■□□□□ 0.88
ERBB2-212ENST00000582788 SMC3Q9UQE7 1217 aa20.52■□□□□ 0.88
ERBB2-212ENST00000582788 RTCBQ9Y3I0 505 aaKnown RBP20.52■□□□□ 0.88
ERBB2-212ENST00000582788 C4BP0C0L5 1744 aa20.51■□□□□ 0.87
ERBB2-212ENST00000582788 LARGE1O95461 756 aa20.51■□□□□ 0.87
ERBB2-212ENST00000582788 UBE2HP62256 183 aa20.51■□□□□ 0.87
ERBB2-212ENST00000582788 GORABQ5T7V8 394 aa20.51■□□□□ 0.87
ERBB2-212ENST00000582788 BICDL1Q6ZP65 573 aa20.51■□□□□ 0.87
ERBB2-212ENST00000582788 ZMYND15Q9H091 742 aa20.51■□□□□ 0.87
ERBB2-212ENST00000582788 PDE8BO95263 885 aa20.51■□□□□ 0.87
ERBB2-212ENST00000582788 HSP90B1P14625 803 aaKnown RBP20.51■□□□□ 0.87
ERBB2-212ENST00000582788 CPA1P15085 419 aa20.51■□□□□ 0.87
ERBB2-212ENST00000582788 ERFEQ4G0M1 354 aa20.51■□□□□ 0.87
ERBB2-212ENST00000582788 CCDC152Q4G0S7 254 aa20.51■□□□□ 0.87
ERBB2-212ENST00000582788 TTC39AQ5SRH9 613 aa20.51■□□□□ 0.87
ERBB2-212ENST00000582788 MAP4K1Q92918 833 aa20.51■□□□□ 0.87
ERBB2-212ENST00000582788 MAP7D2Q96T17 732 aa20.51■□□□□ 0.87
ERBB2-212ENST00000582788 LARP6Q9BRS8 491 aaKnown RBP20.51■□□□□ 0.87
ERBB2-212ENST00000582788 TM6SF1Q9BZW5 370 aa20.51■□□□□ 0.87
ERBB2-212ENST00000582788 NECTIN1Q15223 517 aa20.5■□□□□ 0.87
ERBB2-212ENST00000582788 VPS53Q5VIR6 699 aa20.5■□□□□ 0.87
ERBB2-212ENST00000582788 ARHGEF1Q92888 912 aaKnown RBP20.5■□□□□ 0.87
ERBB2-212ENST00000582788 LRRC4BQ9NT99 713 aa20.5■□□□□ 0.87
ERBB2-212ENST00000582788 RTL9Q8NET4 1388 aa20.5■□□□□ 0.87
ERBB2-212ENST00000582788 PRPF40BQ6NWY9 871 aaKnown RBP20.49■□□□□ 0.87
ERBB2-212ENST00000582788 RBM8AQ9Y5S9 174 aaKnown RBP20.49■□□□□ 0.87
ERBB2-212ENST00000582788 SPEF2Q9C093 1822 aa20.49■□□□□ 0.87
ERBB2-212ENST00000582788 LETM1O95202 739 aaPredicted RBP20.49■□□□□ 0.87
ERBB2-212ENST00000582788 SCARF1Q14162 830 aa20.49■□□□□ 0.87
ERBB2-212ENST00000582788 SEC62Q99442 399 aaKnown RBP20.49■□□□□ 0.87
ERBB2-212ENST00000582788 ZSWIM6Q9HCJ5 1215 aa20.49■□□□□ 0.87
ERBB2-212ENST00000582788 ATP6V1DQ9Y5K8 247 aa20.49■□□□□ 0.87
ERBB2-212ENST00000582788 MROH5Q6ZUA9 1318 aa20.48■□□□□ 0.87
ERBB2-212ENST00000582788 ZPR1O75312 459 aa20.48■□□□□ 0.87
ERBB2-212ENST00000582788 ADCK5Q3MIX3 580 aa20.48■□□□□ 0.87
ERBB2-212ENST00000582788 FAM196AQ6ZSG2 479 aa20.48■□□□□ 0.87
ERBB2-212ENST00000582788 HELBQ8NG08 1087 aaPredicted RBP20.48■□□□□ 0.87
ERBB2-212ENST00000582788 ZSCAN31Q96LW9 406 aaPredicted RBP20.48■□□□□ 0.87
ERBB2-212ENST00000582788 SH2B1Q9NRF2 756 aaPredicted RBP20.48■□□□□ 0.87
ERBB2-212ENST00000582788 PDRG1Q9NUG6 133 aa20.48■□□□□ 0.87
ERBB2-212ENST00000582788 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP20.48■□□□□ 0.87
ERBB2-212ENST00000582788 PTMAP06454 111 aaKnown RBP20.48■□□□□ 0.87
ERBB2-212ENST00000582788 C3orf67Q6ZVT6 689 aa20.48■□□□□ 0.87
ERBB2-212ENST00000582788 KLHL34Q8N239 644 aa20.48■□□□□ 0.87
ERBB2-212ENST00000582788 JAKMIP1Q96N16 626 aaKnown RBP20.48■□□□□ 0.87
ERBB2-212ENST00000582788 MPHOSPH8Q99549 860 aa20.48■□□□□ 0.87
ERBB2-212ENST00000582788 MTMR6Q9Y217 621 aa20.48■□□□□ 0.87
ERBB2-212ENST00000582788 ABCC12Q96J65 1359 aa20.48■□□□□ 0.87
ERBB2-212ENST00000582788 COL4A1P02462 1669 aa20.47■□□□□ 0.87
ERBB2-212ENST00000582788 TAF5LO75529 589 aa20.47■□□□□ 0.87
ERBB2-212ENST00000582788 FKBP4Q02790 459 aaKnown RBP eCLIP20.47■□□□□ 0.87
ERBB2-212ENST00000582788 ST3GAL1Q11201 340 aa20.47■□□□□ 0.87
ERBB2-212ENST00000582788 SLFNL1Q499Z3 407 aa20.47■□□□□ 0.87
ERBB2-212ENST00000582788 CCDC83Q8IWF9 413 aa20.47■□□□□ 0.87
ERBB2-212ENST00000582788 UPF1Q92900 1129 aaKnown RBP eCLIP20.47■□□□□ 0.875e-6■□□□□ 8.7
ERBB2-212ENST00000582788 C4AP0C0L4 1744 aa20.47■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms