RNA–Protein interactions for RNA: ENST00000574501.1

SMG6-215, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

Gene SMG6, Length 2,419 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-215ENST00000574501 KDRP35968 1356 aa16.72■□□□□ 0.27
SMG6-215ENST00000574501 CACNA1FO60840 1977 aa16.72■□□□□ 0.27
SMG6-215ENST00000574501 CTDNEP1O95476 244 aa16.72■□□□□ 0.27
SMG6-215ENST00000574501 NOP2P46087 812 aaKnown RBP16.72■□□□□ 0.27
SMG6-215ENST00000574501 CCDC129Q6ZRS4 1044 aa16.72■□□□□ 0.27
SMG6-215ENST00000574501 ILDR1Q86SU0 546 aaPredicted RBP16.72■□□□□ 0.27
SMG6-215ENST00000574501 SMARCC2Q8TAQ2 1214 aa16.72■□□□□ 0.27
SMG6-215ENST00000574501 ZNF396Q96N95 335 aaPredicted RBP16.72■□□□□ 0.27
SMG6-215ENST00000574501 EFCC1Q9HA90 598 aa16.72■□□□□ 0.27
SMG6-215ENST00000574501 ARFGAP3Q9NP61 516 aa16.72■□□□□ 0.27
SMG6-215ENST00000574501 AGLP35573 1532 aa16.72■□□□□ 0.27
SMG6-215ENST00000574501 PTPDC1A2A3K4 754 aa16.71■□□□□ 0.27
SMG6-215ENST00000574501 DHX16O60231 1041 aaKnown RBP16.71■□□□□ 0.27
SMG6-215ENST00000574501 TPM1P09493 284 aa16.71■□□□□ 0.27
SMG6-215ENST00000574501 FANCCQ00597 558 aa16.71■□□□□ 0.27
SMG6-215ENST00000574501 TSGA10IPQ3SY00 556 aa16.71■□□□□ 0.27
SMG6-215ENST00000574501 ERC1Q8IUD2 1116 aa16.71■□□□□ 0.27
SMG6-215ENST00000574501 FBXO18Q8NFZ0 1043 aa16.71■□□□□ 0.27
SMG6-215ENST00000574501 PARD6BQ9BYG5 372 aa16.71■□□□□ 0.27
SMG6-215ENST00000574501 NCOA5Q9HCD5 579 aaKnown RBP16.71■□□□□ 0.27
SMG6-215ENST00000574501 CWC15Q9P013 229 aaKnown RBP16.71■□□□□ 0.27
SMG6-215ENST00000574501 NDUFB9Q9Y6M9 179 aa16.71■□□□□ 0.27
SMG6-215ENST00000574501 IGSF1Q8N6C5 1336 aa16.71■□□□□ 0.27
SMG6-215ENST00000574501 SPATA31D1Q6ZQQ2 1576 aa16.71■□□□□ 0.27
SMG6-215ENST00000574501 H3BQF6 201 aa16.71■□□□□ 0.27
SMG6-215ENST00000574501 NCAPHQ15003 741 aa16.71■□□□□ 0.27
SMG6-215ENST00000574501 NAA16Q6N069 864 aaPredicted RBP16.71■□□□□ 0.27
SMG6-215ENST00000574501 SRLQ86TD4 932 aa16.71■□□□□ 0.27
SMG6-215ENST00000574501 AK7Q96M32 723 aa16.71■□□□□ 0.27
SMG6-215ENST00000574501 COL15A1P39059 1388 aa16.71■□□□□ 0.27
SMG6-215ENST00000574501 CCP110O43303 1012 aa16.7■□□□□ 0.26
SMG6-215ENST00000574501 CASQ1P31415 396 aa16.7■□□□□ 0.26
SMG6-215ENST00000574501 MTX1Q13505 466 aa16.7■□□□□ 0.26
SMG6-215ENST00000574501 GOLGA5Q8TBA6 731 aa16.7■□□□□ 0.26
SMG6-215ENST00000574501 DPF2Q92785 391 aa16.7■□□□□ 0.26
SMG6-215ENST00000574501 WDR24Q96S15 920 aa16.7■□□□□ 0.26
SMG6-215ENST00000574501 FUT8Q9BYC5 575 aa16.7■□□□□ 0.26
SMG6-215ENST00000574501 ATG3Q9NT62 314 aa16.7■□□□□ 0.26
SMG6-215ENST00000574501 RRP15Q9Y3B9 282 aaKnown RBP16.7■□□□□ 0.26
SMG6-215ENST00000574501 APOBRQ0VD83 1088 aa16.7■□□□□ 0.26
SMG6-215ENST00000574501 KRT32Q14532 448 aa16.7■□□□□ 0.26
SMG6-215ENST00000574501 CWF19L2Q2TBE0 894 aaKnown RBP16.7■□□□□ 0.26
SMG6-215ENST00000574501 PAXIP1Q6ZW49 1069 aaPredicted RBP16.7■□□□□ 0.26
SMG6-215ENST00000574501 GPR161Q8N6U8 529 aaKnown RBP16.7■□□□□ 0.26
SMG6-215ENST00000574501 VWA3AA6NCI4 1184 aa16.69■□□□□ 0.26
SMG6-215ENST00000574501 CYP21A2P08686 494 aa16.69■□□□□ 0.26
SMG6-215ENST00000574501 PPP2R3AQ06190 1150 aa16.69■□□□□ 0.26
SMG6-215ENST00000574501 G3BP1Q13283 466 aaKnown RBP eCLIP16.69■□□□□ 0.26
SMG6-215ENST00000574501 GNG11P61952 73 aa16.69■□□□□ 0.26
SMG6-215ENST00000574501 KLHDC4Q8TBB5 520 aa16.69■□□□□ 0.26
SMG6-215ENST00000574501 LTV1Q96GA3 475 aaPredicted RBP16.69■□□□□ 0.26
SMG6-215ENST00000574501 BPIFA3Q9BQP9 254 aa16.69■□□□□ 0.26
SMG6-215ENST00000574501 FLT4P35916 1363 aa16.68■□□□□ 0.26
SMG6-215ENST00000574501 KCNQ3O43525 872 aa16.68■□□□□ 0.26
SMG6-215ENST00000574501 PFKFB2O60825 505 aa16.68■□□□□ 0.26
SMG6-215ENST00000574501 ALDH1L1O75891 902 aa16.68■□□□□ 0.26
SMG6-215ENST00000574501 SLC3A2P08195 630 aaKnown RBP16.68■□□□□ 0.26
SMG6-215ENST00000574501 SF3A1Q15459 793 aaKnown RBP16.68■□□□□ 0.26
SMG6-215ENST00000574501 ESF1Q9H501 851 aaKnown RBP16.68■□□□□ 0.26
SMG6-215ENST00000574501 ZSWIM4Q9H7M6 989 aa16.68■□□□□ 0.26
SMG6-215ENST00000574501 USP31Q70CQ4 1352 aa16.68■□□□□ 0.26
SMG6-215ENST00000574501 SERPINC1P01008 464 aa16.68■□□□□ 0.26
SMG6-215ENST00000574501 UBASH3AP57075 661 aa16.68■□□□□ 0.26
SMG6-215ENST00000574501 PSME1Q06323 249 aa16.68■□□□□ 0.26
SMG6-215ENST00000574501 USPL1Q5W0Q7 1092 aa16.68■□□□□ 0.26
SMG6-215ENST00000574501 ADALQ6DHV7 355 aa16.68■□□□□ 0.26
SMG6-215ENST00000574501 EXOC4Q96A65 974 aa16.68■□□□□ 0.26
SMG6-215ENST00000574501 MAP3K2Q9Y2U5 619 aa16.68■□□□□ 0.26
SMG6-215ENST00000574501 CLIC4Q9Y696 253 aa16.68■□□□□ 0.26
SMG6-215ENST00000574501 NEDD4P46934 1319 aa16.68■□□□□ 0.26
SMG6-215ENST00000574501 NLRP12P59046 1061 aa16.67■□□□□ 0.26
SMG6-215ENST00000574501 MAP3K9P80192 1104 aa16.67■□□□□ 0.26
SMG6-215ENST00000574501 CFAP100Q494V2 611 aa16.67■□□□□ 0.26
SMG6-215ENST00000574501 OTUD7BQ6GQQ9 843 aa16.67■□□□□ 0.26
SMG6-215ENST00000574501 HSD3B7Q9H2F3 369 aa16.67■□□□□ 0.26
SMG6-215ENST00000574501 PPP2R2CQ9Y2T4 447 aa16.67■□□□□ 0.26
SMG6-215ENST00000574501 TMEM232C9JQI7 657 aa16.67■□□□□ 0.26
SMG6-215ENST00000574501 ACTN2P35609 894 aa16.67■□□□□ 0.26
SMG6-215ENST00000574501 LONRF2Q1L5Z9 754 aa16.67■□□□□ 0.26
SMG6-215ENST00000574501 STOX1Q6ZVD7 989 aa16.67■□□□□ 0.26
SMG6-215ENST00000574501 CHMP4CQ96CF2 233 aa16.67■□□□□ 0.26
SMG6-215ENST00000574501 LLPHQ9BRT6 129 aaKnown RBP16.67■□□□□ 0.26
SMG6-215ENST00000574501 SBNO1A3KN83 1393 aa16.66■□□□□ 0.26
SMG6-215ENST00000574501 POLR3DP05423 398 aaPredicted RBP16.66■□□□□ 0.26
SMG6-215ENST00000574501 EIF4A1P60842 406 aaKnown RBP16.66■□□□□ 0.26
SMG6-215ENST00000574501 STK38Q15208 465 aa16.66■□□□□ 0.26
SMG6-215ENST00000574501 FOXR1Q6PIV2 292 aa16.66■□□□□ 0.26
SMG6-215ENST00000574501 RSRC2Q7L4I2 434 aaKnown RBP16.66■□□□□ 0.26
SMG6-215ENST00000574501 USHBP1Q8N6Y0 703 aa16.66■□□□□ 0.26
SMG6-215ENST00000574501 VPS18Q9P253 973 aa16.66■□□□□ 0.26
SMG6-215ENST00000574501 LRRC37A3O60309 1634 aa16.66■□□□□ 0.26
SMG6-215ENST00000574501 A2ML1A8K2U0 1454 aa16.66■□□□□ 0.26
SMG6-215ENST00000574501 ZSCAN12O43309 604 aa16.66■□□□□ 0.26
SMG6-215ENST00000574501 GTF2A1P52655 376 aaPredicted RBP16.66■□□□□ 0.26
SMG6-215ENST00000574501 MCM6Q14566 821 aa16.66■□□□□ 0.26
SMG6-215ENST00000574501 SUCLG2Q96I99 432 aa16.66■□□□□ 0.26
SMG6-215ENST00000574501 MRFAP1Q9Y605 127 aa16.66■□□□□ 0.26
SMG6-215ENST00000574501 MYH15Q9Y2K3 1946 aa16.66■□□□□ 0.26
SMG6-215ENST00000574501 JCADQ9P266 1359 aa16.65■□□□□ 0.26
SMG6-215ENST00000574501 USP6P35125 1406 aa16.65■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms