RNA–Protein interactions for RNA: ENST00000571613.5

RPAIN-210, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 1,688 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-210ENST00000571613 U3KPZ7 1027 aaPredicted RBP23.32■■□□□ 1.32
RPAIN-210ENST00000571613 CD2BP2O95400 341 aaKnown RBP23.32■■□□□ 1.32
RPAIN-210ENST00000571613 SERPINB2P05120 415 aa23.32■■□□□ 1.32
RPAIN-210ENST00000571613 NLGN1Q8N2Q7 840 aa23.32■■□□□ 1.32
RPAIN-210ENST00000571613 SLKQ9H2G2 1235 aaPredicted RBP23.32■■□□□ 1.32
RPAIN-210ENST00000571613 MINPP1Q9UNW1 487 aa23.32■■□□□ 1.32
RPAIN-210ENST00000571613 RGPD3A6NKT7 1758 aaPredicted RBP23.31■■□□□ 1.32
RPAIN-210ENST00000571613 RGPD4Q7Z3J3 1758 aa23.31■■□□□ 1.32
RPAIN-210ENST00000571613 PSMA5P28066 241 aa23.31■■□□□ 1.32
RPAIN-210ENST00000571613 PHKA1P46020 1223 aa23.31■■□□□ 1.32
RPAIN-210ENST00000571613 SCARF1Q14162 830 aa23.31■■□□□ 1.32
RPAIN-210ENST00000571613 PRR5LQ6MZQ0 368 aa23.31■■□□□ 1.32
RPAIN-210ENST00000571613 POTEAQ6S8J7 498 aa23.31■■□□□ 1.32
RPAIN-210ENST00000571613 ZNF589Q86UQ0 364 aaPredicted RBP23.31■■□□□ 1.32
RPAIN-210ENST00000571613 CELF1Q92879 486 aaKnown RBP23.31■■□□□ 1.32
RPAIN-210ENST00000571613 GNL3LQ9NVN8 582 aaKnown RBP23.31■■□□□ 1.32
RPAIN-210ENST00000571613 CHMP5Q9NZZ3 219 aa23.31■■□□□ 1.32
RPAIN-210ENST00000571613 CIZ1Q9ULV3 898 aaPredicted RBP23.31■■□□□ 1.32
RPAIN-210ENST00000571613 PRPF40BQ6NWY9 871 aaKnown RBP23.3■■□□□ 1.32
RPAIN-210ENST00000571613 DSCC1Q9BVC3 393 aa23.3■■□□□ 1.32
RPAIN-210ENST00000571613 TSGA10IPQ3SY00 556 aa23.29■■□□□ 1.32
RPAIN-210ENST00000571613 CREB3L3Q68CJ9 461 aa23.29■■□□□ 1.32
RPAIN-210ENST00000571613 KRT32Q14532 448 aa23.28■■□□□ 1.32
RPAIN-210ENST00000571613 CAVIN4Q5BKX8 364 aa23.28■■□□□ 1.32
RPAIN-210ENST00000571613 SPATA5Q8NB90 893 aa23.28■■□□□ 1.32
RPAIN-210ENST00000571613 APPBP2Q92624 585 aa23.28■■□□□ 1.32
RPAIN-210ENST00000571613 GRAPQ13588 217 aa23.28■■□□□ 1.32
RPAIN-210ENST00000571613 GRAPLQ8TC17 118 aaPredicted RBP23.28■■□□□ 1.32
RPAIN-210ENST00000571613 CYP2E1P05181 493 aaPredicted RBP23.27■■□□□ 1.32
RPAIN-210ENST00000571613 RASEFQ8IZ41 740 aa23.27■■□□□ 1.32
RPAIN-210ENST00000571613 SLC27A2O14975 620 aa23.26■■□□□ 1.31
RPAIN-210ENST00000571613 UBE3CQ15386 1083 aa23.26■■□□□ 1.31
RPAIN-210ENST00000571613 ZNF827Q17R98 1081 aa23.26■■□□□ 1.31
RPAIN-210ENST00000571613 RPGRQ92834 1020 aaKnown RBP23.26■■□□□ 1.31
RPAIN-210ENST00000571613 AKAP11Q9UKA4 1901 aa23.26■■□□□ 1.31
RPAIN-210ENST00000571613 POLRMTO00411 1230 aaKnown RBP23.25■■□□□ 1.31
RPAIN-210ENST00000571613 ZBTB22O15209 634 aa23.25■■□□□ 1.31
RPAIN-210ENST00000571613 WASHC4Q2M389 1173 aa23.25■■□□□ 1.31
RPAIN-210ENST00000571613 CRY2Q49AN0 593 aa23.25■■□□□ 1.31
RPAIN-210ENST00000571613 SPRYD3Q8NCJ5 442 aa23.25■■□□□ 1.31
RPAIN-210ENST00000571613 SEC62Q99442 399 aaKnown RBP23.25■■□□□ 1.31
RPAIN-210ENST00000571613 CWC22Q9HCG8 908 aaKnown RBP23.25■■□□□ 1.31
RPAIN-210ENST00000571613 CYP46A1Q9Y6A2 500 aa23.25■■□□□ 1.31
RPAIN-210ENST00000571613 CASZ1Q86V15 1759 aa23.25■■□□□ 1.31
RPAIN-210ENST00000571613 ZNF804BA4D1E1 1349 aa23.25■■□□□ 1.31
RPAIN-210ENST00000571613 ADD2P35612 726 aa23.25■■□□□ 1.31
RPAIN-210ENST00000571613 MAP3K12Q12852 859 aa23.25■■□□□ 1.31
RPAIN-210ENST00000571613 RBM17Q96I25 401 aaKnown RBP23.25■■□□□ 1.31
RPAIN-210ENST00000571613 ZSWIM6Q9HCJ5 1215 aa23.25■■□□□ 1.31
RPAIN-210ENST00000571613 TNS1Q9HBL0 1735 aaKnown RBP23.24■■□□□ 1.31
RPAIN-210ENST00000571613 MAST3O60307 1309 aa23.24■■□□□ 1.31
RPAIN-210ENST00000571613 SEMA3EO15041 775 aa23.24■■□□□ 1.31
RPAIN-210ENST00000571613 BCAMP50895 628 aa23.24■■□□□ 1.31
RPAIN-210ENST00000571613 RASGRF1Q13972 1273 aa23.24■■□□□ 1.31
RPAIN-210ENST00000571613 CCDC24Q8N4L8 307 aa23.24■■□□□ 1.31
RPAIN-210ENST00000571613 UPF3BQ9BZI7 483 aaKnown RBP23.24■■□□□ 1.31
RPAIN-210ENST00000571613 CASTP20810 708 aaKnown RBP23.23■■□□□ 1.31
RPAIN-210ENST00000571613 DDIT3P35638 169 aa23.23■■□□□ 1.31
RPAIN-210ENST00000571613 VPS53Q5VIR6 699 aa23.23■■□□□ 1.31
RPAIN-210ENST00000571613 PI16Q6UXB8 463 aa23.23■■□□□ 1.31
RPAIN-210ENST00000571613 VPS37DQ86XT2 251 aa23.23■■□□□ 1.31
RPAIN-210ENST00000571613 COL23A1Q86Y22 540 aaPredicted RBP23.23■■□□□ 1.31
RPAIN-210ENST00000571613 JAKMIP1Q96N16 626 aaKnown RBP23.23■■□□□ 1.31
RPAIN-210ENST00000571613 CTNNA3Q9UI47 895 aa23.23■■□□□ 1.31
RPAIN-210ENST00000571613 SLC9C2Q5TAH2 1124 aa23.22■■□□□ 1.31
RPAIN-210ENST00000571613 CCDC129Q6ZRS4 1044 aa23.22■■□□□ 1.31
RPAIN-210ENST00000571613 OSBP2Q969R2 916 aa23.22■■□□□ 1.31
RPAIN-210ENST00000571613 LEMD3Q9Y2U8 911 aa23.22■■□□□ 1.31
RPAIN-210ENST00000571613 KLRG2A4D1S0 409 aaPredicted RBP23.22■■□□□ 1.31
RPAIN-210ENST00000571613 SNAP23O00161 211 aa23.22■■□□□ 1.31
RPAIN-210ENST00000571613 IDH1O75874 414 aaKnown RBP23.22■■□□□ 1.31
RPAIN-210ENST00000571613 DDR1Q08345 913 aa23.22■■□□□ 1.31
RPAIN-210ENST00000571613 RUFY3Q7L099 469 aa23.22■■□□□ 1.31
RPAIN-210ENST00000571613 TMC4Q7Z404 712 aa23.22■■□□□ 1.31
RPAIN-210ENST00000571613 TTC14Q96N46 770 aa23.22■■□□□ 1.31
RPAIN-210ENST00000571613 DENND2AQ9ULE3 1009 aa23.22■■□□□ 1.31
RPAIN-210ENST00000571613 BBOX1O75936 387 aa23.21■■□□□ 1.31
RPAIN-210ENST00000571613 HSPD1P10809 573 aaKnown RBP23.21■■□□□ 1.31
RPAIN-210ENST00000571613 HOXA10P31260 410 aaPredicted RBP23.21■■□□□ 1.31
RPAIN-210ENST00000571613 INTS4Q96HW7 963 aaKnown RBP23.21■■□□□ 1.31
RPAIN-210ENST00000571613 TMX3Q96JJ7 454 aa23.21■■□□□ 1.31
RPAIN-210ENST00000571613 PIH1D3Q9NQM4 214 aaKnown RBP23.21■■□□□ 1.31
RPAIN-210ENST00000571613 RPAP1Q9BWH6 1393 aaPredicted RBP23.21■■□□□ 1.31
RPAIN-210ENST00000571613 TNRC6CQ9HCJ0 1690 aaKnown RBP23.21■■□□□ 1.31
RPAIN-210ENST00000571613 CRAMP1Q96RY5 1269 aa23.2■■□□□ 1.3
RPAIN-210ENST00000571613 A0A1B0GUL6 1792 aa23.2■■□□□ 1.3
RPAIN-210ENST00000571613 PDS5AQ29RF7 1337 aaKnown RBP23.2■■□□□ 1.3
RPAIN-210ENST00000571613 COL4A1P02462 1669 aa23.19■■□□□ 1.3
RPAIN-210ENST00000571613 M0R2C6 588 aa23.19■■□□□ 1.3
RPAIN-210ENST00000571613 IGSF3O75054 1194 aa23.19■■□□□ 1.3
RPAIN-210ENST00000571613 CHGBP05060 677 aa23.19■■□□□ 1.3
RPAIN-210ENST00000571613 CUL4AQ13619 759 aa23.19■■□□□ 1.3
RPAIN-210ENST00000571613 ANKRD1Q15327 319 aa23.19■■□□□ 1.3
RPAIN-210ENST00000571613 BLOC1S2Q6QNY1 142 aa23.19■■□□□ 1.3
RPAIN-210ENST00000571613 FBXO33Q7Z6M2 555 aa23.19■■□□□ 1.3
RPAIN-210ENST00000571613 BRIP1Q9BX63 1249 aa23.19■■□□□ 1.3
RPAIN-210ENST00000571613 ALDH8A1Q9H2A2 487 aaPredicted RBP23.19■■□□□ 1.3
RPAIN-210ENST00000571613 PDRG1Q9NUG6 133 aa23.19■■□□□ 1.3
RPAIN-210ENST00000571613 MYH7P12883 1935 aa23.19■■□□□ 1.3
RPAIN-210ENST00000571613 HMGB1P09429 215 aaKnown RBP23.19■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms