RNA–Protein interactions for RNA: ENST00000570989.1

ITGA3-216, Transcript of integrin subunit alpha 3, humanhuman

Gene ITGA3, Length 2,495 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA3-216ENST00000570989 STX1AQ16623 288 aa17■□□□□ 0.31
ITGA3-216ENST00000570989 RNF20Q5VTR2 975 aa17■□□□□ 0.31
ITGA3-216ENST00000570989 TRMT1Q9NXH9 659 aaKnown RBP17■□□□□ 0.31
ITGA3-216ENST00000570989 ST7Q9NRC1 585 aa16.99■□□□□ 0.31
ITGA3-216ENST00000570989 COL15A1P39059 1388 aa16.99■□□□□ 0.31
ITGA3-216ENST00000570989 ADAMTS2O95450 1211 aa16.99■□□□□ 0.31
ITGA3-216ENST00000570989 ZNF496Q96IT1 587 aaPredicted RBP16.99■□□□□ 0.31
ITGA3-216ENST00000570989 CCDC8Q9H0W5 538 aaPredicted RBP16.99■□□□□ 0.31
ITGA3-216ENST00000570989 DDX21Q9NR30 783 aaKnown RBP eCLIP16.99■□□□□ 0.31
ITGA3-216ENST00000570989 PCDH11XQ9BZA7 1347 aa16.99■□□□□ 0.31
ITGA3-216ENST00000570989 PCDH11YQ9BZA8 1340 aa16.99■□□□□ 0.31
ITGA3-216ENST00000570989 SNW1Q13573 536 aaKnown RBP16.98■□□□□ 0.31
ITGA3-216ENST00000570989 FILIP1Q7Z7B0 1213 aa16.98■□□□□ 0.31
ITGA3-216ENST00000570989 FTOQ9C0B1 505 aaKnown RBP eCLIP16.98■□□□□ 0.31
ITGA3-216ENST00000570989 SHANK3Q9BYB0 1731 aa16.98■□□□□ 0.31
ITGA3-216ENST00000570989 PDIA6Q15084 440 aa16.98■□□□□ 0.31
ITGA3-216ENST00000570989 KAZALD1Q96I82 304 aa16.98■□□□□ 0.31
ITGA3-216ENST00000570989 CARD10Q9BWT7 1032 aa16.98■□□□□ 0.31
ITGA3-216ENST00000570989 HMG20BQ9P0W2 317 aa16.98■□□□□ 0.31
ITGA3-216ENST00000570989 RGS17Q9UGC6 210 aaPredicted RBP16.98■□□□□ 0.31
ITGA3-216ENST00000570989 MAP3K2Q9Y2U5 619 aa16.98■□□□□ 0.31
ITGA3-216ENST00000570989 GLI3P10071 1580 aa16.98■□□□□ 0.31
ITGA3-216ENST00000570989 TAF5LO75529 589 aa16.97■□□□□ 0.31
ITGA3-216ENST00000570989 USPL1Q5W0Q7 1092 aa16.97■□□□□ 0.31
ITGA3-216ENST00000570989 KSR2Q6VAB6 950 aa16.97■□□□□ 0.31
ITGA3-216ENST00000570989 FSD1Q9BTV5 496 aa16.97■□□□□ 0.31
ITGA3-216ENST00000570989 BOLA2Q9H3K6 86 aa16.97■□□□□ 0.31
ITGA3-216ENST00000570989 STRN4Q9NRL3 753 aa16.97■□□□□ 0.31
ITGA3-216ENST00000570989 ZBTB22O15209 634 aa16.97■□□□□ 0.31
ITGA3-216ENST00000570989 SLU7O95391 586 aaKnown RBP16.97■□□□□ 0.31
ITGA3-216ENST00000570989 CEBPZQ03701 1054 aaKnown RBP16.97■□□□□ 0.31
ITGA3-216ENST00000570989 NBPF11Q86T75 865 aa16.97■□□□□ 0.31
ITGA3-216ENST00000570989 TTC5Q8N0Z6 440 aa16.97■□□□□ 0.31
ITGA3-216ENST00000570989 ZCRB1Q8TBF4 217 aaKnown RBP16.97■□□□□ 0.31
ITGA3-216ENST00000570989 CTAGE5O15320 804 aa16.96■□□□□ 0.31
ITGA3-216ENST00000570989 ALDH1L1O75891 902 aa16.96■□□□□ 0.31
ITGA3-216ENST00000570989 CABP4P57796 275 aa16.96■□□□□ 0.31
ITGA3-216ENST00000570989 CWF19L2Q2TBE0 894 aaKnown RBP16.96■□□□□ 0.31
ITGA3-216ENST00000570989 CCAR1Q8IX12 1150 aaKnown RBP16.96■□□□□ 0.31
ITGA3-216ENST00000570989 ENGASEQ8NFI3 743 aa16.96■□□□□ 0.31
ITGA3-216ENST00000570989 ZSCAN16Q9H4T2 348 aaPredicted RBP16.96■□□□□ 0.31
ITGA3-216ENST00000570989 C9orf78Q9NZ63 289 aaPredicted RBP16.96■□□□□ 0.31
ITGA3-216ENST00000570989 RCOR1Q9UKL0 485 aa16.96■□□□□ 0.31
ITGA3-216ENST00000570989 CFAP45Q9UL16 551 aa16.96■□□□□ 0.31
ITGA3-216ENST00000570989 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP16.96■□□□□ 0.31
ITGA3-216ENST00000570989 IL2RBP14784 551 aa16.96■□□□□ 0.31
ITGA3-216ENST00000570989 H2AFXP16104 143 aaPredicted RBP16.96■□□□□ 0.31
ITGA3-216ENST00000570989 LRRN4CLQ8ND94 238 aa16.96■□□□□ 0.31
ITGA3-216ENST00000570989 L2HGDHQ9H9P8 463 aa16.96■□□□□ 0.31
ITGA3-216ENST00000570989 H3BQV1 296 aa16.95■□□□□ 0.3
ITGA3-216ENST00000570989 IFFO2Q5TF58 517 aa16.95■□□□□ 0.3
ITGA3-216ENST00000570989 E4F1Q66K89 784 aaPredicted RBP16.95■□□□□ 0.3
ITGA3-216ENST00000570989 SMARCC2Q8TAQ2 1214 aa16.95■□□□□ 0.3
ITGA3-216ENST00000570989 SUCLG2Q96I99 432 aa16.95■□□□□ 0.3
ITGA3-216ENST00000570989 OSBPL5Q9H0X9 879 aaPredicted RBP16.95■□□□□ 0.3
ITGA3-216ENST00000570989 LAMB4A4D0S4 1761 aa16.95■□□□□ 0.3
ITGA3-216ENST00000570989 SNRPA1P09661 255 aaKnown RBP16.94■□□□□ 0.3
ITGA3-216ENST00000570989 EDC3Q96F86 508 aaKnown RBP16.94■□□□□ 0.3
ITGA3-216ENST00000570989 FMNL2Q96PY5 1086 aa16.94■□□□□ 0.3
ITGA3-216ENST00000570989 BECN2A8MW95 431 aa16.94■□□□□ 0.3
ITGA3-216ENST00000570989 DDX58O95786 925 aaKnown RBP16.94■□□□□ 0.3
ITGA3-216ENST00000570989 EVA1CP58658 441 aa16.94■□□□□ 0.3
ITGA3-216ENST00000570989 SCRN1Q12765 414 aa16.94■□□□□ 0.3
ITGA3-216ENST00000570989 Q6ZUG5 572 aa16.94■□□□□ 0.3
ITGA3-216ENST00000570989 AOPEPQ8N6M6 819 aa16.94■□□□□ 0.3
ITGA3-216ENST00000570989 AIMP1Q12904 312 aaKnown RBP16.93■□□□□ 0.3
ITGA3-216ENST00000570989 CCDC93Q567U6 631 aa16.93■□□□□ 0.3
ITGA3-216ENST00000570989 ERCC4Q92889 916 aaPredicted RBP16.93■□□□□ 0.3
ITGA3-216ENST00000570989 C8orf37Q96NL8 207 aa16.93■□□□□ 0.3
ITGA3-216ENST00000570989 BICC1Q9H694 974 aaKnown RBP16.93■□□□□ 0.3
ITGA3-216ENST00000570989 ANO10Q9NW15 660 aa16.93■□□□□ 0.3
ITGA3-216ENST00000570989 PLCH1Q4KWH8 1693 aa16.93■□□□□ 0.3
ITGA3-216ENST00000570989 LAMA4Q16363 1823 aa16.93■□□□□ 0.3
ITGA3-216ENST00000570989 NEK1Q96PY6 1258 aa16.93■□□□□ 0.3
ITGA3-216ENST00000570989 USP28Q96RU2 1077 aa16.93■□□□□ 0.3
ITGA3-216ENST00000570989 UBR2Q8IWV8 1755 aa16.93■□□□□ 0.3
ITGA3-216ENST00000570989 CCDC66A2RUB6 948 aa16.92■□□□□ 0.3
ITGA3-216ENST00000570989 KIF2AO00139 706 aaPredicted RBP16.92■□□□□ 0.3
ITGA3-216ENST00000570989 MYL6BP14649 208 aa16.92■□□□□ 0.3
ITGA3-216ENST00000570989 FAM160A1Q05DH4 1040 aa16.92■□□□□ 0.3
ITGA3-216ENST00000570989 KRT32Q14532 448 aa16.92■□□□□ 0.3
ITGA3-216ENST00000570989 ERCC6LQ2NKX8 1250 aa16.92■□□□□ 0.3
ITGA3-216ENST00000570989 MEX3CQ5U5Q3 659 aaKnown RBP16.92■□□□□ 0.3
ITGA3-216ENST00000570989 PPP1R13BQ96KQ4 1090 aa16.92■□□□□ 0.3
ITGA3-216ENST00000570989 FHOD1Q9Y613 1164 aa16.92■□□□□ 0.3
ITGA3-216ENST00000570989 UTYO14607 1347 aa16.92■□□□□ 0.3
ITGA3-216ENST00000570989 NPHP1O15259 732 aa16.92■□□□□ 0.3
ITGA3-216ENST00000570989 CTDNEP1O95476 244 aa16.92■□□□□ 0.3
ITGA3-216ENST00000570989 GSDMDP57764 484 aa16.92■□□□□ 0.3
ITGA3-216ENST00000570989 G3BP1Q13283 466 aaKnown RBP eCLIP16.92■□□□□ 0.3
ITGA3-216ENST00000570989 NAA16Q6N069 864 aaPredicted RBP16.92■□□□□ 0.3
ITGA3-216ENST00000570989 NSUN7Q8NE18 718 aaKnown RBP16.92■□□□□ 0.3
ITGA3-216ENST00000570989 LINS1Q8NG48 757 aa16.92■□□□□ 0.3
ITGA3-216ENST00000570989 CHGBP05060 677 aa16.91■□□□□ 0.3
ITGA3-216ENST00000570989 IRX5P78411 483 aaPredicted RBP16.91■□□□□ 0.3
ITGA3-216ENST00000570989 NKX1-1Q15270 411 aaPredicted RBP16.91■□□□□ 0.3
ITGA3-216ENST00000570989 ARMCX5Q6P1M9 558 aa16.91■□□□□ 0.3
ITGA3-216ENST00000570989 CCDC73Q6ZRK6 1079 aa16.91■□□□□ 0.3
ITGA3-216ENST00000570989 CEP57L1Q8IYX8 460 aa16.91■□□□□ 0.3
ITGA3-216ENST00000570989 LRRC2Q9BYS8 371 aa16.91■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms