RNA–Protein interactions for RNA: ENST00000568651.1

HERPUD1-214, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 3

Gene HERPUD1, Length 458 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-214ENST00000568651 BMP1P13497 986 aa9.73□□□□□ -0.85
HERPUD1-214ENST00000568651 EFCAB2Q5VUJ9 269 aa9.73□□□□□ -0.85
HERPUD1-214ENST00000568651 HS2ST1Q7LGA3 356 aa9.73□□□□□ -0.85
HERPUD1-214ENST00000568651 SUV39H2Q9H5I1 410 aa9.73□□□□□ -0.85
HERPUD1-214ENST00000568651 NPHS2Q9NP85 383 aa9.73□□□□□ -0.85
HERPUD1-214ENST00000568651 DNMT3LQ9UJW3 386 aa9.73□□□□□ -0.85
HERPUD1-214ENST00000568651 KCNH4Q9UQ05 1017 aa9.73□□□□□ -0.85
HERPUD1-214ENST00000568651 ZNF335Q9H4Z2 1342 aaPredicted RBP9.73□□□□□ -0.85
HERPUD1-214ENST00000568651 SAMD9Q5K651 1589 aa9.72□□□□□ -0.85
HERPUD1-214ENST00000568651 IRS1P35568 1242 aa9.72□□□□□ -0.85
HERPUD1-214ENST00000568651 GNL2Q13823 731 aaKnown RBP9.72□□□□□ -0.85
HERPUD1-214ENST00000568651 TAF1CQ15572 869 aaPredicted RBP9.72□□□□□ -0.85
HERPUD1-214ENST00000568651 TTC39BQ5VTQ0 682 aaPredicted RBP9.72□□□□□ -0.85
HERPUD1-214ENST00000568651 KIAA0319Q5VV43 1072 aa9.72□□□□□ -0.85
HERPUD1-214ENST00000568651 ZFP42Q96MM3 310 aa9.72□□□□□ -0.85
HERPUD1-214ENST00000568651 GPAMQ9HCL2 828 aa9.72□□□□□ -0.85
HERPUD1-214ENST00000568651 DDX41Q9UJV9 622 aaKnown RBP9.72□□□□□ -0.85
HERPUD1-214ENST00000568651 EPB41L3Q9Y2J2 1087 aaPredicted RBP9.72□□□□□ -0.85
HERPUD1-214ENST00000568651 STRCQ7RTU9 1775 aa9.72□□□□□ -0.85
HERPUD1-214ENST00000568651 PLCH2O75038 1416 aa9.72□□□□□ -0.85
HERPUD1-214ENST00000568651 CDK13Q14004 1512 aaKnown RBP9.72□□□□□ -0.85
HERPUD1-214ENST00000568651 LTBP4Q8N2S1 1624 aa9.71□□□□□ -0.85
HERPUD1-214ENST00000568651 PREX1Q8TCU6 1659 aa9.71□□□□□ -0.85
HERPUD1-214ENST00000568651 FIGNL2A6NMB9 653 aa9.71□□□□□ -0.86
HERPUD1-214ENST00000568651 EDN3P14138 238 aa9.71□□□□□ -0.86
HERPUD1-214ENST00000568651 PI16Q6UXB8 463 aa9.71□□□□□ -0.86
HERPUD1-214ENST00000568651 ZNF654Q8IZM8 581 aa9.71□□□□□ -0.86
HERPUD1-214ENST00000568651 C1orf127Q8N9H9 656 aa9.71□□□□□ -0.86
HERPUD1-214ENST00000568651 ANKRD24Q8TF21 1146 aa9.71□□□□□ -0.86
HERPUD1-214ENST00000568651 CNTN3Q9P232 1028 aa9.71□□□□□ -0.86
HERPUD1-214ENST00000568651 TRAK1Q9UPV9 953 aa9.71□□□□□ -0.86
HERPUD1-214ENST00000568651 CFAP74Q9C0B2 1584 aa9.71□□□□□ -0.86
HERPUD1-214ENST00000568651 EREGO14944 169 aa9.7□□□□□ -0.86
HERPUD1-214ENST00000568651 USP17L7P0C7H9 530 aa9.7□□□□□ -0.86
HERPUD1-214ENST00000568651 CES1P23141 567 aa9.7□□□□□ -0.86
HERPUD1-214ENST00000568651 GSTT1P30711 240 aa9.7□□□□□ -0.86
HERPUD1-214ENST00000568651 PIP4K2BP78356 416 aa9.7□□□□□ -0.86
HERPUD1-214ENST00000568651 CCINQ13939 588 aa9.7□□□□□ -0.86
HERPUD1-214ENST00000568651 BCO2Q9BYV7 579 aa9.7□□□□□ -0.86
HERPUD1-214ENST00000568651 PCDHGC4Q9Y5F7 938 aa9.7□□□□□ -0.86
HERPUD1-214ENST00000568651 SENP3-EIF4A1A0A087X0R7 540 aa9.69□□□□□ -0.86
HERPUD1-214ENST00000568651 ATXN7O15265 892 aaPredicted RBP9.69□□□□□ -0.86
HERPUD1-214ENST00000568651 HOXD8P13378 290 aaPredicted RBP9.69□□□□□ -0.86
HERPUD1-214ENST00000568651 PRPF40BQ6NWY9 871 aaKnown RBP9.69□□□□□ -0.86
HERPUD1-214ENST00000568651 OR13H1Q8NG92 308 aa9.69□□□□□ -0.86
HERPUD1-214ENST00000568651 ARMC5Q96C12 935 aa9.69□□□□□ -0.86
HERPUD1-214ENST00000568651 GMLQ99445 158 aa9.69□□□□□ -0.86
HERPUD1-214ENST00000568651 ZCCHC2Q9C0B9 1178 aaKnown RBP9.69□□□□□ -0.86
HERPUD1-214ENST00000568651 PPP4R2Q9NY27 417 aa9.69□□□□□ -0.86
HERPUD1-214ENST00000568651 NCOA1Q15788 1441 aa9.68□□□□□ -0.86
HERPUD1-214ENST00000568651 TRAPPC8Q9Y2L5 1435 aa9.68□□□□□ -0.86
HERPUD1-214ENST00000568651 H7C1W4 665 aa9.68□□□□□ -0.86
HERPUD1-214ENST00000568651 AXIN1O15169 862 aa9.68□□□□□ -0.86
HERPUD1-214ENST00000568651 GADD45BO75293 160 aaPredicted RBP9.68□□□□□ -0.86
HERPUD1-214ENST00000568651 HSPA1LP34931 641 aa9.68□□□□□ -0.86
HERPUD1-214ENST00000568651 SOX18P35713 384 aa9.68□□□□□ -0.86
HERPUD1-214ENST00000568651 GRM2Q14416 872 aa9.68□□□□□ -0.86
HERPUD1-214ENST00000568651 PKDCCQ504Y2 493 aa9.68□□□□□ -0.86
HERPUD1-214ENST00000568651 GMCL1Q96IK5 515 aa9.68□□□□□ -0.86
HERPUD1-214ENST00000568651 GAS2L1Q99501 681 aaPredicted RBP9.68□□□□□ -0.86
HERPUD1-214ENST00000568651 NOC4LQ9BVI4 516 aaKnown RBP9.68□□□□□ -0.86
HERPUD1-214ENST00000568651 GSX2Q9BZM3 304 aa9.68□□□□□ -0.86
HERPUD1-214ENST00000568651 XRCC5P13010 732 aaKnown RBP9.67□□□□□ -0.86
HERPUD1-214ENST00000568651 NXPE4Q6UWF7 544 aa9.67□□□□□ -0.86
HERPUD1-214ENST00000568651 ERMP1Q7Z2K6 904 aa9.67□□□□□ -0.86
HERPUD1-214ENST00000568651 USP48Q86UV5 1035 aa9.67□□□□□ -0.86
HERPUD1-214ENST00000568651 PPM1HQ9ULR3 514 aa9.67□□□□□ -0.86
HERPUD1-214ENST00000568651 PHF20L1A8MW92 1017 aa9.66□□□□□ -0.86
HERPUD1-214ENST00000568651 NRG2O14511 850 aaPredicted RBP9.66□□□□□ -0.86
HERPUD1-214ENST00000568651 MAN1A2O60476 641 aa9.66□□□□□ -0.86
HERPUD1-214ENST00000568651 MAP3K6O95382 1288 aa9.66□□□□□ -0.86
HERPUD1-214ENST00000568651 POLR3DP05423 398 aaPredicted RBP9.66□□□□□ -0.86
HERPUD1-214ENST00000568651 UBAP2LQ14157 1087 aaKnown RBP9.66□□□□□ -0.86
HERPUD1-214ENST00000568651 ACBD3Q9H3P7 528 aa9.66□□□□□ -0.86
HERPUD1-214ENST00000568651 CAPN10Q9HC96 672 aa9.66□□□□□ -0.86
HERPUD1-214ENST00000568651 SRA1Q9HD15 236 aaKnown RBP9.66□□□□□ -0.86
HERPUD1-214ENST00000568651 GGT7Q9UJ14 662 aa9.66□□□□□ -0.86
HERPUD1-214ENST00000568651 TNP2Q05952 138 aa9.65□□□□□ -0.86
HERPUD1-214ENST00000568651 MEI1Q5TIA1 1274 aa9.65□□□□□ -0.86
HERPUD1-214ENST00000568651 GLIS3Q8NEA6 775 aa9.65□□□□□ -0.86
HERPUD1-214ENST00000568651 NUCKS1Q9H1E3 243 aaKnown RBP9.65□□□□□ -0.86
HERPUD1-214ENST00000568651 ZFYVE1Q9HBF4 777 aa9.65□□□□□ -0.86
HERPUD1-214ENST00000568651 SALL4Q9UJQ4 1053 aa9.65□□□□□ -0.86
HERPUD1-214ENST00000568651 IQSEC2Q5JU85 1478 aa9.65□□□□□ -0.87
HERPUD1-214ENST00000568651 A0A1W2PP55 124 aa9.64□□□□□ -0.87
HERPUD1-214ENST00000568651 SLC35F4A4IF30 521 aa9.64□□□□□ -0.87
HERPUD1-214ENST00000568651 SASH3O75995 380 aa9.64□□□□□ -0.87
HERPUD1-214ENST00000568651 KIF4AO95239 1232 aa9.64□□□□□ -0.87
HERPUD1-214ENST00000568651 THBS1P07996 1170 aa9.64□□□□□ -0.87
HERPUD1-214ENST00000568651 SFSWAPQ12872 951 aaKnown RBP9.64□□□□□ -0.87
HERPUD1-214ENST00000568651 C3orf58Q8NDZ4 430 aa9.64□□□□□ -0.87
HERPUD1-214ENST00000568651 TANGO6Q9C0B7 1094 aa9.64□□□□□ -0.87
HERPUD1-214ENST00000568651 NDFIP2Q9NV92 336 aa9.64□□□□□ -0.87
HERPUD1-214ENST00000568651 ARHGAP5Q13017 1502 aa9.64□□□□□ -0.87
HERPUD1-214ENST00000568651 ZNF518AQ6AHZ1 1483 aa9.64□□□□□ -0.87
HERPUD1-214ENST00000568651 CAMSAP1Q5T5Y3 1602 aa9.64□□□□□ -0.87
HERPUD1-214ENST00000568651 MMP20O60882 483 aa9.63□□□□□ -0.87
HERPUD1-214ENST00000568651 RARAP10276 462 aa9.63□□□□□ -0.87
HERPUD1-214ENST00000568651 RACK1P63244 317 aaKnown RBP9.63□□□□□ -0.87
HERPUD1-214ENST00000568651 PWP1Q13610 501 aa9.63□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms