RNA–Protein interactions for RNA: ENST00000562601.5

CDH13-206, Transcript of cadherin 13, humanhuman

TSL 4

Gene CDH13, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-206ENST00000562601 POLD1P28340 1107 aa7.61□□□□□ -1.19
CDH13-206ENST00000562601 PIP4K2AP48426 406 aaPredicted RBP7.61□□□□□ -1.19
CDH13-206ENST00000562601 SH3BP2P78314 561 aa7.61□□□□□ -1.19
CDH13-206ENST00000562601 LINC01559Q495D7 138 aa7.61□□□□□ -1.19
CDH13-206ENST00000562601 CYP4X1Q8N118 509 aa7.61□□□□□ -1.19
CDH13-206ENST00000562601 EHBP1Q8NDI1 1231 aa7.61□□□□□ -1.19
CDH13-206ENST00000562601 FLAD1Q8NFF5 587 aa7.61□□□□□ -1.19
CDH13-206ENST00000562601 SLC16A10Q8TF71 515 aa7.61□□□□□ -1.19
CDH13-206ENST00000562601 FMNL2Q96PY5 1086 aa7.61□□□□□ -1.19
CDH13-206ENST00000562601 ARXQ96QS3 562 aa7.61□□□□□ -1.19
CDH13-206ENST00000562601 CCDC87Q9NVE4 849 aa7.61□□□□□ -1.19
CDH13-206ENST00000562601 PKD2L1Q9P0L9 805 aa7.61□□□□□ -1.19
CDH13-206ENST00000562601 SRP68Q9UHB9 627 aaKnown RBP7.61□□□□□ -1.19
CDH13-206ENST00000562601 ZBTB1Q9Y2K1 713 aa7.61□□□□□ -1.19
CDH13-206ENST00000562601 LAS1LQ9Y4W2 734 aaKnown RBP7.61□□□□□ -1.19
CDH13-206ENST00000562601 C4AP0C0L4 1744 aa7.61□□□□□ -1.19
CDH13-206ENST00000562601 COL24A1Q17RW2 1714 aa7.61□□□□□ -1.19
CDH13-206ENST00000562601 HEG1Q9ULI3 1381 aa7.6□□□□□ -1.19
CDH13-206ENST00000562601 TNFRSF10AO00220 468 aa7.6□□□□□ -1.19
CDH13-206ENST00000562601 A1BGP04217 495 aa7.6□□□□□ -1.19
CDH13-206ENST00000562601 HMGB2P26583 209 aaKnown RBP7.6□□□□□ -1.19
CDH13-206ENST00000562601 RFC4P35249 363 aa7.6□□□□□ -1.19
CDH13-206ENST00000562601 SKOR1P84550 965 aa7.6□□□□□ -1.19
CDH13-206ENST00000562601 TRIM67Q6ZTA4 783 aa7.6□□□□□ -1.19
CDH13-206ENST00000562601 BPHLQ86WA6 291 aaPredicted RBP7.6□□□□□ -1.19
CDH13-206ENST00000562601 FAM9BQ8IZU0 186 aa7.6□□□□□ -1.19
CDH13-206ENST00000562601 PNISRQ8TF01 805 aaKnown RBP7.6□□□□□ -1.19
CDH13-206ENST00000562601 FHDC1Q9C0D6 1143 aaPredicted RBP7.6□□□□□ -1.19
CDH13-206ENST00000562601 FKBPLQ9UIM3 349 aa7.6□□□□□ -1.19
CDH13-206ENST00000562601 ZNF330Q9Y3S2 320 aaPredicted RBP7.6□□□□□ -1.19
CDH13-206ENST00000562601 USP16Q9Y5T5 823 aa7.6□□□□□ -1.19
CDH13-206ENST00000562601 KDM3BQ7LBC6 1761 aa7.6□□□□□ -1.19
CDH13-206ENST00000562601 CICQ96RK0 1608 aaPredicted RBP7.6□□□□□ -1.19
CDH13-206ENST00000562601 STARD3NLO95772 234 aa7.59□□□□□ -1.19
CDH13-206ENST00000562601 VARSP26640 1264 aaKnown RBP7.59□□□□□ -1.19
CDH13-206ENST00000562601 AGERQ15109 404 aa7.59□□□□□ -1.19
CDH13-206ENST00000562601 NR6A1Q15406 480 aa7.59□□□□□ -1.19
CDH13-206ENST00000562601 MRGPRX2Q96LB1 330 aa7.59□□□□□ -1.19
CDH13-206ENST00000562601 TSPYL4Q9UJ04 414 aa7.59□□□□□ -1.19
CDH13-206ENST00000562601 SOS1Q07889 1333 aaPredicted RBP7.58□□□□□ -1.2
CDH13-206ENST00000562601 TTC24A2A3L6 582 aaPredicted RBP7.58□□□□□ -1.2
CDH13-206ENST00000562601 SNRPA1P09661 255 aaKnown RBP7.58□□□□□ -1.2
CDH13-206ENST00000562601 GYS1P13807 737 aa7.58□□□□□ -1.2
CDH13-206ENST00000562601 EIF4A1P60842 406 aaKnown RBP7.58□□□□□ -1.2
CDH13-206ENST00000562601 LMOD3Q0VAK6 560 aa7.58□□□□□ -1.2
CDH13-206ENST00000562601 USPL1Q5W0Q7 1092 aa7.58□□□□□ -1.2
CDH13-206ENST00000562601 SNIP1Q8TAD8 396 aaKnown RBP7.58□□□□□ -1.2
CDH13-206ENST00000562601 SYT17Q9BSW7 474 aa7.58□□□□□ -1.2
CDH13-206ENST00000562601 TEX13AQ9BXU3 409 aaPredicted RBP7.58□□□□□ -1.2
CDH13-206ENST00000562601 PRM3Q9NNZ6 103 aa7.58□□□□□ -1.2
CDH13-206ENST00000562601 HMX1Q9NP08 348 aaPredicted RBP7.58□□□□□ -1.2
CDH13-206ENST00000562601 MMP10P09238 476 aa7.57□□□□□ -1.2
CDH13-206ENST00000562601 KRT24Q2M2I5 525 aa7.57□□□□□ -1.2
CDH13-206ENST00000562601 PDXDC2PQ6P474 469 aa7.57□□□□□ -1.2
CDH13-206ENST00000562601 TRAF7Q6Q0C0 670 aa7.57□□□□□ -1.2
CDH13-206ENST00000562601 NGEFQ8N5V2 710 aa7.57□□□□□ -1.2
CDH13-206ENST00000562601 NLGN2Q8NFZ4 835 aa7.57□□□□□ -1.2
CDH13-206ENST00000562601 FAM174AQ8TBP5 190 aa7.57□□□□□ -1.2
CDH13-206ENST00000562601 WWC3Q9ULE0 1092 aa7.57□□□□□ -1.2
CDH13-206ENST00000562601 TBC1D2BQ9UPU7 963 aa7.57□□□□□ -1.2
CDH13-206ENST00000562601 COL15A1P39059 1388 aa7.57□□□□□ -1.2
CDH13-206ENST00000562601 USP42Q9H9J4 1324 aaKnown RBP7.56□□□□□ -1.2
CDH13-206ENST00000562601 GIGYF1O75420 1035 aaPredicted RBP7.56□□□□□ -1.2
CDH13-206ENST00000562601 DGAT1O75907 488 aa7.56□□□□□ -1.2
CDH13-206ENST00000562601 EIF2S2P20042 333 aaKnown RBP7.56□□□□□ -1.2
CDH13-206ENST00000562601 EIF5P55010 431 aaKnown RBP7.56□□□□□ -1.2
CDH13-206ENST00000562601 PKDCCQ504Y2 493 aa7.56□□□□□ -1.2
CDH13-206ENST00000562601 NBPF10Q6P3W6 841 aaKnown RBP7.56□□□□□ -1.2
CDH13-206ENST00000562601 BICDL1Q6ZP65 573 aa7.56□□□□□ -1.2
CDH13-206ENST00000562601 NBPF15Q8N660 670 aa7.56□□□□□ -1.2
CDH13-206ENST00000562601 TOR4AQ9NXH8 423 aa7.56□□□□□ -1.2
CDH13-206ENST00000562601 GPSM3Q9Y4H4 160 aa7.56□□□□□ -1.2
CDH13-206ENST00000562601 LAMB4A4D0S4 1761 aa7.56□□□□□ -1.2
CDH13-206ENST00000562601 AFDNP55196 1824 aaKnown RBP7.55□□□□□ -1.2
CDH13-206ENST00000562601 FAM187AA6NFU0 413 aa7.55□□□□□ -1.2
CDH13-206ENST00000562601 CHL1O00533 1208 aa7.55□□□□□ -1.2
CDH13-206ENST00000562601 MYL6BP14649 208 aa7.55□□□□□ -1.2
CDH13-206ENST00000562601 PTK2Q05397 1052 aa7.55□□□□□ -1.2
CDH13-206ENST00000562601 NLGN1Q8N2Q7 840 aa7.55□□□□□ -1.2
CDH13-206ENST00000562601 MPNDQ8N594 471 aa7.55□□□□□ -1.2
CDH13-206ENST00000562601 NARFQ9UHQ1 456 aa7.55□□□□□ -1.2
CDH13-206ENST00000562601 PARP3Q9Y6F1 533 aa7.55□□□□□ -1.2
CDH13-206ENST00000562601 NDUFB9Q9Y6M9 179 aa7.55□□□□□ -1.2
CDH13-206ENST00000562601 N4BP2Q86UW6 1770 aaPredicted RBP7.55□□□□□ -1.2
CDH13-206ENST00000562601 GOLGB1Q14789 3259 aaKnown RBP7.54□□□□□ -1.2
CDH13-206ENST00000562601 A0A087WZG4 1122 aa7.54□□□□□ -1.2
CDH13-206ENST00000562601 ELL2O00472 640 aaPredicted RBP7.54□□□□□ -1.2
CDH13-206ENST00000562601 ANXA1P04083 346 aa7.54□□□□□ -1.2
CDH13-206ENST00000562601 IL6STP40189 918 aaPredicted RBP7.54□□□□□ -1.2
CDH13-206ENST00000562601 DDR1Q08345 913 aa7.54□□□□□ -1.2
CDH13-206ENST00000562601 DIEXFQ68CQ4 756 aaKnown RBP7.54□□□□□ -1.2
CDH13-206ENST00000562601 SH3BP5LQ7L8J4 393 aa7.54□□□□□ -1.2
CDH13-206ENST00000562601 SH3RF1Q7Z6J0 888 aa7.54□□□□□ -1.2
CDH13-206ENST00000562601 NPM2Q86SE8 214 aaKnown RBP7.54□□□□□ -1.2
CDH13-206ENST00000562601 DZIP3Q86Y13 1208 aaKnown RBP7.54□□□□□ -1.2
CDH13-206ENST00000562601 FOXJ1Q92949 421 aa7.54□□□□□ -1.2
CDH13-206ENST00000562601 ARHGAP9Q9BRR9 750 aa7.54□□□□□ -1.2
CDH13-206ENST00000562601 TRIM34Q9BYJ4 488 aa7.54□□□□□ -1.2
CDH13-206ENST00000562601 MBIPQ9NS73 344 aa7.54□□□□□ -1.2
CDH13-206ENST00000562601 POLRMTO00411 1230 aaKnown RBP7.53□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 80.7 ms