RNA–Protein interactions for RNA: ENST00000560131.1

TPM1-222, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 537 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-222ENST00000560131 TNNI2P48788 182 aa6.75□□□□□ -1.33
TPM1-222ENST00000560131 PTPN12Q05209 780 aaKnown RBP6.75□□□□□ -1.33
TPM1-222ENST00000560131 CCDC184Q52MB2 194 aa6.75□□□□□ -1.33
TPM1-222ENST00000560131 XKR5Q6UX68 686 aa6.75□□□□□ -1.33
TPM1-222ENST00000560131 NOP9Q86U38 636 aaKnown RBP6.75□□□□□ -1.33
TPM1-222ENST00000560131 C7orf43Q8WVR3 580 aa6.75□□□□□ -1.33
TPM1-222ENST00000560131 DHX38Q92620 1227 aaKnown RBP6.75□□□□□ -1.33
TPM1-222ENST00000560131 DNAJC2Q99543 621 aaKnown RBP6.75□□□□□ -1.33
TPM1-222ENST00000560131 BCS1LQ9Y276 419 aa6.75□□□□□ -1.33
TPM1-222ENST00000560131 INPP5FQ9Y2H2 1132 aa6.75□□□□□ -1.33
TPM1-222ENST00000560131 GRIN2BQ13224 1484 aa6.74□□□□□ -1.33
TPM1-222ENST00000560131 MBD5Q9P267 1494 aa6.74□□□□□ -1.33
TPM1-222ENST00000560131 BRD4O60885 1362 aaPredicted RBP6.74□□□□□ -1.33
TPM1-222ENST00000560131 A6NHS1 94 aa6.74□□□□□ -1.33
TPM1-222ENST00000560131 OPLAHO14841 1288 aa6.74□□□□□ -1.33
TPM1-222ENST00000560131 FURINP09958 794 aa6.74□□□□□ -1.33
TPM1-222ENST00000560131 DNAJA1P31689 397 aaKnown RBP6.74□□□□□ -1.33
TPM1-222ENST00000560131 RACK1P63244 317 aaKnown RBP6.74□□□□□ -1.33
TPM1-222ENST00000560131 ARID5AQ03989 594 aa6.74□□□□□ -1.33
TPM1-222ENST00000560131 RBL2Q08999 1139 aa6.74□□□□□ -1.33
TPM1-222ENST00000560131 LARP7Q4G0J3 582 aaKnown RBP eCLIP6.74□□□□□ -1.33
TPM1-222ENST00000560131 GIMAP6Q6P9H5 292 aa6.74□□□□□ -1.33
TPM1-222ENST00000560131 AGBL1Q96MI9 1066 aa6.74□□□□□ -1.33
TPM1-222ENST00000560131 KRTAP4-12Q9BQ66 201 aa6.74□□□□□ -1.33
TPM1-222ENST00000560131 GRIP2Q9C0E4 1043 aa6.74□□□□□ -1.33
TPM1-222ENST00000560131 LNPKQ9C0E8 428 aa6.74□□□□□ -1.33
TPM1-222ENST00000560131 E9PCH4 1651 aa6.74□□□□□ -1.33
TPM1-222ENST00000560131 KIF7Q2M1P5 1343 aa6.74□□□□□ -1.33
TPM1-222ENST00000560131 PLEKHH2Q8IVE3 1493 aa6.73□□□□□ -1.33
TPM1-222ENST00000560131 ROCK1Q13464 1354 aa6.73□□□□□ -1.33
TPM1-222ENST00000560131 KIF14Q15058 1648 aa6.73□□□□□ -1.33
TPM1-222ENST00000560131 BTBD11A6QL63 1104 aa6.73□□□□□ -1.33
TPM1-222ENST00000560131 TGFBR3LH3BV60 316 aa6.73□□□□□ -1.33
TPM1-222ENST00000560131 GPC1P35052 558 aa6.73□□□□□ -1.33
TPM1-222ENST00000560131 RRP1P56182 461 aaKnown RBP6.73□□□□□ -1.33
TPM1-222ENST00000560131 NFKBIBQ15653 356 aa6.73□□□□□ -1.33
TPM1-222ENST00000560131 ZNF394Q53GI3 561 aa6.73□□□□□ -1.33
TPM1-222ENST00000560131 GNASQ5JWF2 1037 aa6.73□□□□□ -1.33
TPM1-222ENST00000560131 HS2ST1Q7LGA3 356 aa6.73□□□□□ -1.33
TPM1-222ENST00000560131 USP48Q86UV5 1035 aa6.73□□□□□ -1.33
TPM1-222ENST00000560131 VPS37DQ86XT2 251 aa6.73□□□□□ -1.33
TPM1-222ENST00000560131 FAM9BQ8IZU0 186 aa6.73□□□□□ -1.33
TPM1-222ENST00000560131 CCDC74AQ96AQ1 378 aa6.73□□□□□ -1.33
TPM1-222ENST00000560131 PKNOX2Q96KN3 472 aa6.73□□□□□ -1.33
TPM1-222ENST00000560131 C12orf49Q9H741 205 aa6.73□□□□□ -1.33
TPM1-222ENST00000560131 ZNF395Q9H8N7 513 aaPredicted RBP6.73□□□□□ -1.33
TPM1-222ENST00000560131 SRA1Q9HD15 236 aaKnown RBP6.73□□□□□ -1.33
TPM1-222ENST00000560131 FNDC3AQ9Y2H6 1198 aaKnown RBP6.73□□□□□ -1.33
TPM1-222ENST00000560131 VIRMAQ69YN4 1812 aaKnown RBP6.73□□□□□ -1.33
TPM1-222ENST00000560131 LRRIQ1Q96JM4 1722 aa6.73□□□□□ -1.33
TPM1-222ENST00000560131 ANKRD30BQ9BXX2 1392 aa6.72□□□□□ -1.33
TPM1-222ENST00000560131 TNFRSF21O75509 655 aa6.72□□□□□ -1.33
TPM1-222ENST00000560131 RELBQ01201 579 aa6.72□□□□□ -1.33
TPM1-222ENST00000560131 TAF1CQ15572 869 aaPredicted RBP6.72□□□□□ -1.33
TPM1-222ENST00000560131 SOGA3Q5TF21 947 aa6.72□□□□□ -1.33
TPM1-222ENST00000560131 IER5Q5VY09 327 aa6.72□□□□□ -1.33
TPM1-222ENST00000560131 RHPN1Q8TCX5 695 aa6.72□□□□□ -1.33
TPM1-222ENST00000560131 PNISRQ8TF01 805 aaKnown RBP6.72□□□□□ -1.33
TPM1-222ENST00000560131 OSBPL7Q9BZF2 842 aa6.72□□□□□ -1.33
TPM1-222ENST00000560131 DMGDHQ9UI17 866 aaKnown RBP6.72□□□□□ -1.33
TPM1-222ENST00000560131 GGT7Q9UJ14 662 aa6.72□□□□□ -1.33
TPM1-222ENST00000560131 GPC6Q9Y625 555 aaPredicted RBP6.72□□□□□ -1.33
TPM1-222ENST00000560131 CCDC144AA2RUR9 1427 aa6.72□□□□□ -1.33
TPM1-222ENST00000560131 KDM5CP41229 1560 aa6.72□□□□□ -1.33
TPM1-222ENST00000560131 UHRF1BP1Q6BDS2 1440 aa6.71□□□□□ -1.34
TPM1-222ENST00000560131 NBPF1Q3BBV0 1214 aa6.71□□□□□ -1.34
TPM1-222ENST00000560131 C4orf17Q53FE4 359 aa6.71□□□□□ -1.34
TPM1-222ENST00000560131 SLC27A3Q5K4L6 730 aa6.71□□□□□ -1.34
TPM1-222ENST00000560131 NEDD1Q8NHV4 660 aa6.71□□□□□ -1.34
TPM1-222ENST00000560131 EPS8L3Q8TE67 593 aaKnown RBP6.71□□□□□ -1.34
TPM1-222ENST00000560131 AIDAQ96BJ3 306 aa6.71□□□□□ -1.34
TPM1-222ENST00000560131 SUSD3Q96L08 255 aa6.71□□□□□ -1.34
TPM1-222ENST00000560131 ZFYVE28Q9HCC9 887 aa6.71□□□□□ -1.34
TPM1-222ENST00000560131 ZDHHC3Q9NYG2 299 aa6.71□□□□□ -1.34
TPM1-222ENST00000560131 ANKIB1Q9P2G1 1089 aa6.71□□□□□ -1.34
TPM1-222ENST00000560131 PCDHGB7Q9Y5F8 929 aa6.71□□□□□ -1.34
TPM1-222ENST00000560131 GAPVD1Q14C86 1478 aa6.71□□□□□ -1.34
TPM1-222ENST00000560131 ABCA10Q8WWZ4 1543 aa6.71□□□□□ -1.34
TPM1-222ENST00000560131 SPINT1O43278 529 aa6.7□□□□□ -1.34
TPM1-222ENST00000560131 NCLP19338 710 aaKnown RBP6.7□□□□□ -1.34
TPM1-222ENST00000560131 PLA2G4AP47712 749 aa6.7□□□□□ -1.34
TPM1-222ENST00000560131 IDH3AP50213 366 aa6.7□□□□□ -1.34
TPM1-222ENST00000560131 ST13P50502 369 aaKnown RBP6.7□□□□□ -1.34
TPM1-222ENST00000560131 RNF144AP50876 292 aaPredicted RBP6.7□□□□□ -1.34
TPM1-222ENST00000560131 CCDC144BQ3MJ40 725 aa6.7□□□□□ -1.34
TPM1-222ENST00000560131 USPL1Q5W0Q7 1092 aa6.7□□□□□ -1.34
TPM1-222ENST00000560131 PDE12Q6L8Q7 609 aaKnown RBP6.7□□□□□ -1.34
TPM1-222ENST00000560131 SNX29Q8TEQ0 813 aa6.7□□□□□ -1.34
TPM1-222ENST00000560131 SRCIN1Q9C0H9 1055 aa6.7□□□□□ -1.34
TPM1-222ENST00000560131 FAM8A1Q9UBU6 413 aa6.7□□□□□ -1.34
TPM1-222ENST00000560131 FOXD3Q9UJU5 478 aaPredicted RBP6.7□□□□□ -1.34
TPM1-222ENST00000560131 BCORL1Q5H9F3 1711 aa6.7□□□□□ -1.34
TPM1-222ENST00000560131 MTUS2Q5JR59 1369 aa6.69□□□□□ -1.34
TPM1-222ENST00000560131 KIF15Q9NS87 1388 aa6.69□□□□□ -1.34
TPM1-222ENST00000560131 FHOD3Q2V2M9 1422 aa6.69□□□□□ -1.34
TPM1-222ENST00000560131 RRP9O43818 475 aaKnown RBP6.69□□□□□ -1.34
TPM1-222ENST00000560131 TATP17735 454 aaPredicted RBP6.69□□□□□ -1.34
TPM1-222ENST00000560131 ARSDP51689 593 aa6.69□□□□□ -1.34
TPM1-222ENST00000560131 RALBP1Q15311 655 aa6.69□□□□□ -1.34
TPM1-222ENST00000560131 L1TD1Q5T7N2 865 aaKnown RBP6.69□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 61.2 ms