RNA–Protein interactions for RNA: ENST00000559175.1

CTDSPL2-206, Transcript of CTD small phosphatase like 2, humanhuman

TSL 2

Gene CTDSPL2, Length 3,609 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL2-206ENST00000559175 CBFA2T2O43439 604 aa6.94□□□□□ -1.3
CTDSPL2-206ENST00000559175 FMNL1O95466 1100 aaPredicted RBP6.94□□□□□ -1.3
CTDSPL2-206ENST00000559175 VIL1P09327 827 aaKnown RBP6.94□□□□□ -1.3
CTDSPL2-206ENST00000559175 CCDC70Q6NSX1 233 aa6.94□□□□□ -1.3
CTDSPL2-206ENST00000559175 CWC25Q9NXE8 425 aaPredicted RBP6.94□□□□□ -1.3
CTDSPL2-206ENST00000559175 CICQ96RK0 1608 aaPredicted RBP6.94□□□□□ -1.3
CTDSPL2-206ENST00000559175 LZTS3O60299 673 aaPredicted RBP6.94□□□□□ -1.3
CTDSPL2-206ENST00000559175 NAT2P11245 290 aa6.94□□□□□ -1.3
CTDSPL2-206ENST00000559175 SKIP12755 728 aa6.94□□□□□ -1.3
CTDSPL2-206ENST00000559175 ELOAQ14241 798 aaKnown RBP6.94□□□□□ -1.3
CTDSPL2-206ENST00000559175 NRKQ7Z2Y5 1582 aa6.94□□□□□ -1.3
CTDSPL2-206ENST00000559175 TMC7Q7Z402 723 aa6.94□□□□□ -1.3
CTDSPL2-206ENST00000559175 CKAP2LQ8IYA6 745 aa6.94□□□□□ -1.3
CTDSPL2-206ENST00000559175 ACRBPQ8NEB7 543 aa6.94□□□□□ -1.3
CTDSPL2-206ENST00000559175 GTF3C2Q8WUA4 911 aaPredicted RBP6.94□□□□□ -1.3
CTDSPL2-206ENST00000559175 CEP126Q9P2H0 1117 aa6.94□□□□□ -1.3
CTDSPL2-206ENST00000559175 FEZ2Q9UHY8 353 aaPredicted RBP6.94□□□□□ -1.3
CTDSPL2-206ENST00000559175 ANAPC4Q9UJX5 808 aa6.94□□□□□ -1.3
CTDSPL2-206ENST00000559175 MED1Q15648 1581 aaPredicted RBP6.93□□□□□ -1.3
CTDSPL2-206ENST00000559175 BICDL2A1A5D9 508 aa6.93□□□□□ -1.3
CTDSPL2-206ENST00000559175 KIF3BO15066 747 aa6.93□□□□□ -1.3
CTDSPL2-206ENST00000559175 MYL3P08590 195 aa6.93□□□□□ -1.3
CTDSPL2-206ENST00000559175 SF3B2Q13435 895 aaKnown RBP6.93□□□□□ -1.3
CTDSPL2-206ENST00000559175 ZKSCAN8Q15776 578 aaPredicted RBP6.93□□□□□ -1.3
CTDSPL2-206ENST00000559175 MFSD4BQ5TF39 518 aa6.93□□□□□ -1.3
CTDSPL2-206ENST00000559175 HELQQ8TDG4 1101 aa6.93□□□□□ -1.3
CTDSPL2-206ENST00000559175 SPIRE2Q8WWL2 714 aa6.93□□□□□ -1.3
CTDSPL2-206ENST00000559175 ATRIPQ8WXE1 791 aa6.93□□□□□ -1.3
CTDSPL2-206ENST00000559175 CLP1Q92989 425 aaKnown RBP6.93□□□□□ -1.3
CTDSPL2-206ENST00000559175 ANKRD30BQ9BXX2 1392 aa6.93□□□□□ -1.3
CTDSPL2-206ENST00000559175 PPFIA3O75145 1194 aa6.93□□□□□ -1.3
CTDSPL2-206ENST00000559175 ATICP31939 592 aa6.93□□□□□ -1.3
CTDSPL2-206ENST00000559175 HMGN5P82970 282 aaKnown RBP6.93□□□□□ -1.3
CTDSPL2-206ENST00000559175 KCNH2Q12809 1159 aa6.93□□□□□ -1.3
CTDSPL2-206ENST00000559175 NYAP1Q6ZVC0 841 aa6.93□□□□□ -1.3
CTDSPL2-206ENST00000559175 SAMD3Q8N6K7 520 aa6.93□□□□□ -1.3
CTDSPL2-206ENST00000559175 YY1AP1Q9H869 796 aa6.93□□□□□ -1.3
CTDSPL2-206ENST00000559175 CD248Q9HCU0 757 aa6.93□□□□□ -1.3
CTDSPL2-206ENST00000559175 ZIM2Q9NZV7 527 aa6.93□□□□□ -1.3
CTDSPL2-206ENST00000559175 ASAP1Q9ULH1 1129 aa6.93□□□□□ -1.3
CTDSPL2-206ENST00000559175 TRPM3Q9HCF6 1732 aaPredicted RBP6.93□□□□□ -1.3
CTDSPL2-206ENST00000559175 DHX29Q7Z478 1369 aaKnown RBP6.93□□□□□ -1.3
CTDSPL2-206ENST00000559175 PLCH1Q4KWH8 1693 aa6.93□□□□□ -1.3
CTDSPL2-206ENST00000559175 FMN2Q9NZ56 1722 aa6.93□□□□□ -1.3
CTDSPL2-206ENST00000559175 PLEKHG4Q58EX7 1191 aa6.93□□□□□ -1.3
CTDSPL2-206ENST00000559175 UTP14CQ5TAP6 766 aaKnown RBP6.93□□□□□ -1.3
CTDSPL2-206ENST00000559175 IL31Q6EBC2 164 aa6.93□□□□□ -1.3
CTDSPL2-206ENST00000559175 ANKRD23Q86SG2 305 aa6.93□□□□□ -1.3
CTDSPL2-206ENST00000559175 DNMT3AQ9Y6K1 912 aaPredicted RBP6.93□□□□□ -1.3
CTDSPL2-206ENST00000559175 ABCC6O95255 1503 aa6.93□□□□□ -1.3
CTDSPL2-206ENST00000559175 ADGRB1O14514 1584 aa6.92□□□□□ -1.3
CTDSPL2-206ENST00000559175 USP17L5A8MUK1 530 aa6.92□□□□□ -1.3
CTDSPL2-206ENST00000559175 NBNO60934 754 aa6.92□□□□□ -1.3
CTDSPL2-206ENST00000559175 DPYDQ12882 1025 aa6.92□□□□□ -1.3
CTDSPL2-206ENST00000559175 SEPT2Q15019 361 aa6.92□□□□□ -1.3
CTDSPL2-206ENST00000559175 RGL4Q8IZJ4 473 aa6.92□□□□□ -1.3
CTDSPL2-206ENST00000559175 ANKRD42Q8N9B4 389 aa6.92□□□□□ -1.3
CTDSPL2-206ENST00000559175 TEX19Q8NA77 164 aa6.92□□□□□ -1.3
CTDSPL2-206ENST00000559175 GPR101Q96P66 508 aaPredicted RBP6.92□□□□□ -1.3
CTDSPL2-206ENST00000559175 DNAJC25Q9H1X3 360 aa6.92□□□□□ -1.3
CTDSPL2-206ENST00000559175 CAMTA1Q9Y6Y1 1673 aa6.92□□□□□ -1.3
CTDSPL2-206ENST00000559175 NKTRP30414 1462 aaKnown RBP6.92□□□□□ -1.3
CTDSPL2-206ENST00000559175 PRPF3O43395 683 aaKnown RBP6.92□□□□□ -1.3
CTDSPL2-206ENST00000559175 RAB27AP51159 221 aa6.92□□□□□ -1.3
CTDSPL2-206ENST00000559175 NEK3P51956 506 aa6.92□□□□□ -1.3
CTDSPL2-206ENST00000559175 ECM1Q16610 540 aa6.92□□□□□ -1.3
CTDSPL2-206ENST00000559175 SNTG2Q9NY99 539 aa6.92□□□□□ -1.3
CTDSPL2-206ENST00000559175 KIF1AQ12756 1690 aa6.92□□□□□ -1.3
CTDSPL2-206ENST00000559175 MASP1P48740 699 aa6.91□□□□□ -1.3
CTDSPL2-206ENST00000559175 E2F5Q15329 346 aa6.91□□□□□ -1.3
CTDSPL2-206ENST00000559175 SPECC1Q5M775 1068 aa6.91□□□□□ -1.3
CTDSPL2-206ENST00000559175 SOGA3Q5TF21 947 aa6.91□□□□□ -1.3
CTDSPL2-206ENST00000559175 ERAP2Q6P179 960 aa6.91□□□□□ -1.3
CTDSPL2-206ENST00000559175 SNX32Q86XE0 403 aa6.91□□□□□ -1.3
CTDSPL2-206ENST00000559175 RELL1Q8IUW5 271 aa6.91□□□□□ -1.3
CTDSPL2-206ENST00000559175 CLIC5Q9NZA1 410 aa6.91□□□□□ -1.3
CTDSPL2-206ENST00000559175 RAB3GAP2Q9H2M9 1393 aa6.91□□□□□ -1.3
CTDSPL2-206ENST00000559175 AKAP12Q02952 1782 aa6.91□□□□□ -1.3
CTDSPL2-206ENST00000559175 FIBPO43427 364 aa6.91□□□□□ -1.3
CTDSPL2-206ENST00000559175 PIP5K1CO60331 668 aa6.91□□□□□ -1.3
CTDSPL2-206ENST00000559175 U2AF1L5P0DN76 240 aaPredicted RBP6.91□□□□□ -1.3
CTDSPL2-206ENST00000559175 MAP3K9P80192 1104 aa6.91□□□□□ -1.3
CTDSPL2-206ENST00000559175 U2AF1Q01081 240 aaKnown RBP eCLIP6.91□□□□□ -1.3
CTDSPL2-206ENST00000559175 NFE2Q16621 373 aaPredicted RBP6.91□□□□□ -1.3
CTDSPL2-206ENST00000559175 EIF2AK1Q9BQI3 630 aaKnown RBP6.91□□□□□ -1.3
CTDSPL2-206ENST00000559175 POLG2Q9UHN1 485 aa6.91□□□□□ -1.3
CTDSPL2-206ENST00000559175 YEATS2Q9ULM3 1422 aa6.91□□□□□ -1.3
CTDSPL2-206ENST00000559175 EPB42P16452 691 aa6.91□□□□□ -1.3
CTDSPL2-206ENST00000559175 FLT3P36888 993 aa6.91□□□□□ -1.3
CTDSPL2-206ENST00000559175 TAS1R3Q7RTX0 852 aa6.91□□□□□ -1.3
CTDSPL2-206ENST00000559175 FLCNQ8NFG4 579 aa6.91□□□□□ -1.3
CTDSPL2-206ENST00000559175 NELL1Q92832 810 aa6.91□□□□□ -1.3
CTDSPL2-206ENST00000559175 ZNF408Q9H9D4 720 aa6.91□□□□□ -1.3
CTDSPL2-206ENST00000559175 PRKAB1Q9Y478 270 aa6.91□□□□□ -1.3
CTDSPL2-206ENST00000559175 ALS2Q96Q42 1657 aa6.91□□□□□ -1.3
CTDSPL2-206ENST00000559175 C21orf2O43822 256 aa6.9□□□□□ -1.3
CTDSPL2-206ENST00000559175 IFIT2P09913 472 aaKnown RBP6.9□□□□□ -1.3
CTDSPL2-206ENST00000559175 PTK7Q13308 1070 aa6.9□□□□□ -1.3
CTDSPL2-206ENST00000559175 DNAJC21Q5F1R6 531 aaKnown RBP6.9□□□□□ -1.3
CTDSPL2-206ENST00000559175 ZCCHC8Q6NZY4 707 aaKnown RBP6.9□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms