RNA–Protein interactions for RNA: ENST00000559175.1

CTDSPL2-206, Transcript of CTD small phosphatase like 2, humanhuman

TSL 2

Gene CTDSPL2, Length 3,609 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL2-206ENST00000559175 SLC24A1O60721 1099 aa12.15□□□□□ -0.46
CTDSPL2-206ENST00000559175 CHIC1Q5VXU3 224 aa11.9□□□□□ -0.5
CTDSPL2-206ENST00000559175 EHMT2Q96KQ7 1210 aa11.72□□□□□ -0.53
CTDSPL2-206ENST00000559175 NISCHQ9Y2I1 1504 aa11.63□□□□□ -0.55
CTDSPL2-206ENST00000559175 PLPPR3Q6T4P5 718 aa11.28□□□□□ -0.6
CTDSPL2-206ENST00000559175 AEBP2Q6ZN18 517 aaPredicted RBP11.25□□□□□ -0.61
CTDSPL2-206ENST00000559175 RTN4Q9NQC3 1192 aaKnown RBP11.12□□□□□ -0.63
CTDSPL2-206ENST00000559175 CCDC180Q9P1Z9 1646 aa11.1□□□□□ -0.63
CTDSPL2-206ENST00000559175 PHF23Q9BUL5 403 aaPredicted RBP10.82□□□□□ -0.68
CTDSPL2-206ENST00000559175 DAXXQ9UER7 740 aaPredicted RBP10.82□□□□□ -0.68
CTDSPL2-206ENST00000559175 KCNA4P22459 653 aa10.75□□□□□ -0.69
CTDSPL2-206ENST00000559175 NCBP3Q53F19 620 aaKnown RBP10.73□□□□□ -0.69
CTDSPL2-206ENST00000559175 PRKCSHP14314 528 aaPredicted RBP10.71□□□□□ -0.69
CTDSPL2-206ENST00000559175 CSRNP3Q8WYN3 585 aa10.71□□□□□ -0.69
CTDSPL2-206ENST00000559175 AMER1Q5JTC6 1135 aaPredicted RBP10.69□□□□□ -0.7
CTDSPL2-206ENST00000559175 MYO15BQ96JP2 1530 aa10.51□□□□□ -0.73
CTDSPL2-206ENST00000559175 TIMELESSQ9UNS1 1208 aa10.36□□□□□ -0.75
CTDSPL2-206ENST00000559175 DCAF1Q9Y4B6 1507 aa10.32□□□□□ -0.76
CTDSPL2-206ENST00000559175 TULP1O00294 542 aaPredicted RBP10.27□□□□□ -0.77
CTDSPL2-206ENST00000559175 MYT1Q01538 1121 aa10.26□□□□□ -0.77
CTDSPL2-206ENST00000559175 SLC4A1APQ9BWU0 796 aaKnown RBP10.21□□□□□ -0.77
CTDSPL2-206ENST00000559175 ARXQ96QS3 562 aa10.21□□□□□ -0.78
CTDSPL2-206ENST00000559175 TAOK2Q9UL54 1235 aa10.21□□□□□ -0.78
CTDSPL2-206ENST00000559175 SHROOM4Q9ULL8 1493 aa10.18□□□□□ -0.78
CTDSPL2-206ENST00000559175 PELP1Q8IZL8 1130 aaKnown RBP10.16□□□□□ -0.78
CTDSPL2-206ENST00000559175 TPRNQ4KMQ1 711 aa10.14□□□□□ -0.79
CTDSPL2-206ENST00000559175 APLP2Q06481 763 aa10.09□□□□□ -0.79
CTDSPL2-206ENST00000559175 RANGAP1P46060 587 aaPredicted RBP10.08□□□□□ -0.8
CTDSPL2-206ENST00000559175 UNC13AQ9UPW8 1703 aa10.08□□□□□ -0.8
CTDSPL2-206ENST00000559175 ERICH6Q7L0X2 663 aa10.07□□□□□ -0.8
CTDSPL2-206ENST00000559175 BCANQ96GW7 911 aa10.04□□□□□ -0.8
CTDSPL2-206ENST00000559175 TTBK1Q5TCY1 1321 aaPredicted RBP10.03□□□□□ -0.8
CTDSPL2-206ENST00000559175 NACADO15069 1562 aa10.02□□□□□ -0.81
CTDSPL2-206ENST00000559175 HOMEZQ8IX15 550 aa9.99□□□□□ -0.81
CTDSPL2-206ENST00000559175 HAP1P54257 671 aaPredicted RBP9.97□□□□□ -0.81
CTDSPL2-206ENST00000559175 PODXL2Q9NZ53 605 aa9.95□□□□□ -0.82
CTDSPL2-206ENST00000559175 KLHL34Q8N239 644 aa9.95□□□□□ -0.82
CTDSPL2-206ENST00000559175 ADRA2BP18089 450 aa9.92□□□□□ -0.82
CTDSPL2-206ENST00000559175 PLCB2Q00722 1185 aa9.91□□□□□ -0.82
CTDSPL2-206ENST00000559175 ZCCHC6Q5VYS8 1495 aaKnown RBP9.86□□□□□ -0.83
CTDSPL2-206ENST00000559175 ZBTB22O15209 634 aa9.84□□□□□ -0.83
CTDSPL2-206ENST00000559175 GTF3C3Q9Y5Q9 886 aa9.84□□□□□ -0.83
CTDSPL2-206ENST00000559175 RB1CC1Q8TDY2 1594 aa9.83□□□□□ -0.84
CTDSPL2-206ENST00000559175 BICRAQ9NZM4 1560 aa9.75□□□□□ -0.85
CTDSPL2-206ENST00000559175 EIF5BO60841 1220 aaKnown RBP9.71□□□□□ -0.85
CTDSPL2-206ENST00000559175 FKBP8Q14318 412 aa9.69□□□□□ -0.86
CTDSPL2-206ENST00000559175 NPM2Q86SE8 214 aaKnown RBP9.65□□□□□ -0.86
CTDSPL2-206ENST00000559175 C14orf37Q86TY3 774 aa9.64□□□□□ -0.87
CTDSPL2-206ENST00000559175 DCAF8L2P0C7V8 631 aa9.62□□□□□ -0.87
CTDSPL2-206ENST00000559175 SUPT5HO00267 1087 aaKnown RBP9.6□□□□□ -0.87
CTDSPL2-206ENST00000559175 PEG3Q9GZU2 1588 aa9.59□□□□□ -0.87
CTDSPL2-206ENST00000559175 TMEM132AQ24JP5 1023 aa9.58□□□□□ -0.88
CTDSPL2-206ENST00000559175 FBLN2P98095 1184 aa9.54□□□□□ -0.88
CTDSPL2-206ENST00000559175 KDM2AQ9Y2K7 1162 aa9.54□□□□□ -0.88
CTDSPL2-206ENST00000559175 NPM3O75607 178 aaKnown RBP9.52□□□□□ -0.89
CTDSPL2-206ENST00000559175 TRIM26Q12899 539 aaPredicted RBP9.5□□□□□ -0.89
CTDSPL2-206ENST00000559175 VSIG10Q8N0Z9 540 aa9.48□□□□□ -0.89
CTDSPL2-206ENST00000559175 PLEKHG5O94827 1062 aa9.47□□□□□ -0.89
CTDSPL2-206ENST00000559175 UBTFP17480 764 aaKnown RBP9.42□□□□□ -0.9
CTDSPL2-206ENST00000559175 PRDM2Q13029 1718 aa9.41□□□□□ -0.9
CTDSPL2-206ENST00000559175 SMARCA2P51531 1590 aa9.37□□□□□ -0.91
CTDSPL2-206ENST00000559175 LOC105371045A0A1W2PR82 267 aa9.32□□□□□ -0.92
CTDSPL2-206ENST00000559175 HRCP23327 699 aa9.31□□□□□ -0.92
CTDSPL2-206ENST00000559175 FBXO3Q9UK99 471 aa9.3□□□□□ -0.92
CTDSPL2-206ENST00000559175 HMGXB3Q12766 1538 aa9.3□□□□□ -0.92
CTDSPL2-206ENST00000559175 PPP6R1Q9UPN7 881 aa9.29□□□□□ -0.92
CTDSPL2-206ENST00000559175 ABCC9O60706 1549 aa9.28□□□□□ -0.92
CTDSPL2-206ENST00000559175 PPP4R3CPQ6ZMV5 832 aa9.25□□□□□ -0.93
CTDSPL2-206ENST00000559175 CFAP44Q96MT7 982 aa9.23□□□□□ -0.93
CTDSPL2-206ENST00000559175 PAXIP1Q6ZW49 1069 aaPredicted RBP9.19□□□□□ -0.94
CTDSPL2-206ENST00000559175 EIF4G1Q04637 1599 aaKnown RBP9.19□□□□□ -0.94
CTDSPL2-206ENST00000559175 NBR1Q14596 966 aa9.18□□□□□ -0.94
CTDSPL2-206ENST00000559175 BCL11AQ9H165 835 aa9.18□□□□□ -0.94
CTDSPL2-206ENST00000559175 FOXD4L1Q9NU39 408 aa9.18□□□□□ -0.94
CTDSPL2-206ENST00000559175 SMARCA4P51532 1647 aa9.14□□□□□ -0.95
CTDSPL2-206ENST00000559175 ARID3AQ99856 593 aa9.13□□□□□ -0.95
CTDSPL2-206ENST00000559175 TSHZ2Q9NRE2 1034 aa9.12□□□□□ -0.95
CTDSPL2-206ENST00000559175 CC2D2AQ9P2K1 1620 aa9.09□□□□□ -0.95
CTDSPL2-206ENST00000559175 WDR97A6NE52 1622 aa9.07□□□□□ -0.96
CTDSPL2-206ENST00000559175 NCAPD3P42695 1498 aa9.06□□□□□ -0.96
CTDSPL2-206ENST00000559175 CHMP4AQ9BY43 222 aa9.05□□□□□ -0.96
CTDSPL2-206ENST00000559175 SENP3Q9H4L4 574 aaPredicted RBP9.04□□□□□ -0.96
CTDSPL2-206ENST00000559175 ZBTB4Q9P1Z0 1013 aaPredicted RBP9.03□□□□□ -0.96
CTDSPL2-206ENST00000559175 BAZ1AQ9NRL2 1556 aaPredicted RBP9.03□□□□□ -0.96
CTDSPL2-206ENST00000559175 IGSF3O75054 1194 aa9.02□□□□□ -0.97
CTDSPL2-206ENST00000559175 CDK11BP21127 795 aaKnown RBP9□□□□□ -0.97
CTDSPL2-206ENST00000559175 CDK11AQ9UQ88 783 aaPredicted RBP9□□□□□ -0.97
CTDSPL2-206ENST00000559175 SCRIBQ14160 1630 aa9□□□□□ -0.97
CTDSPL2-206ENST00000559175 TRHP20396 242 aaPredicted RBP9□□□□□ -0.97
CTDSPL2-206ENST00000559175 PDIA4P13667 645 aaKnown RBP8.99□□□□□ -0.97
CTDSPL2-206ENST00000559175 THOC2Q8NI27 1593 aaKnown RBP8.97□□□□□ -0.97
CTDSPL2-206ENST00000559175 NPM1P06748 294 aaKnown RBP eCLIP8.97□□□□□ -0.97
CTDSPL2-206ENST00000559175 DHX37Q8IY37 1157 aaKnown RBP8.97□□□□□ -0.97
CTDSPL2-206ENST00000559175 LAMC3Q9Y6N6 1575 aa8.95□□□□□ -0.98
CTDSPL2-206ENST00000559175 FAM9AQ8IZU1 332 aaPredicted RBP8.94□□□□□ -0.98
CTDSPL2-206ENST00000559175 CCDC9Q9Y3X0 531 aaKnown RBP8.93□□□□□ -0.98
CTDSPL2-206ENST00000559175 PKD2Q13563 968 aa8.92□□□□□ -0.98
CTDSPL2-206ENST00000559175 SAMD1Q6SPF0 538 aaPredicted RBP8.91□□□□□ -0.98
CTDSPL2-206ENST00000559175 BBXQ8WY36 941 aaPredicted RBP8.87□□□□□ -0.99
CTDSPL2-206ENST00000559175 TOP2AP11388 1531 aaKnown RBP8.86□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms