RNA–Protein interactions for RNA: ENST00000558763.1

SMAD3-207, Transcript of SMAD family member 3, humanhuman

TSL 2

Gene SMAD3, Length 1,957 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-207ENST00000558763 COL11A2P13942 1736 aaPredicted RBP15.63■□□□□ 0.09
SMAD3-207ENST00000558763 DDX46Q7L014 1031 aaKnown RBP15.63■□□□□ 0.09
SMAD3-207ENST00000558763 KBTBD3Q8NAB2 608 aa15.63■□□□□ 0.09
SMAD3-207ENST00000558763 AKAP2Q9Y2D5 859 aa15.63■□□□□ 0.09
SMAD3-207ENST00000558763 SNX14Q9Y5W7 946 aa15.63■□□□□ 0.09
SMAD3-207ENST00000558763 RPGRQ92834 1020 aaKnown RBP15.62■□□□□ 0.09
SMAD3-207ENST00000558763 MYO5AQ9Y4I1 1855 aaKnown RBP15.62■□□□□ 0.09
SMAD3-207ENST00000558763 C10orf71Q711Q0 1435 aa15.62■□□□□ 0.09
SMAD3-207ENST00000558763 SCARF1Q14162 830 aa15.62■□□□□ 0.09
SMAD3-207ENST00000558763 NECTIN1Q15223 517 aa15.62■□□□□ 0.09
SMAD3-207ENST00000558763 METTL24Q5JXM2 366 aa15.62■□□□□ 0.09
SMAD3-207ENST00000558763 MAP4K1Q92918 833 aa15.62■□□□□ 0.09
SMAD3-207ENST00000558763 PAG1Q9NWQ8 432 aa15.62■□□□□ 0.09
SMAD3-207ENST00000558763 ST18O60284 1047 aa15.61■□□□□ 0.09
SMAD3-207ENST00000558763 FGFR2P21802 821 aa15.61■□□□□ 0.09
SMAD3-207ENST00000558763 PDE6BP35913 854 aa15.61■□□□□ 0.09
SMAD3-207ENST00000558763 NEK4P51957 841 aa15.61■□□□□ 0.09
SMAD3-207ENST00000558763 ATP2B3Q16720 1220 aa15.61■□□□□ 0.09
SMAD3-207ENST00000558763 CRY2Q49AN0 593 aa15.61■□□□□ 0.09
SMAD3-207ENST00000558763 GOLIM4O00461 696 aa15.6■□□□□ 0.09
SMAD3-207ENST00000558763 PDE8BO95263 885 aa15.6■□□□□ 0.09
SMAD3-207ENST00000558763 IFIT1P09914 478 aaKnown RBP15.6■□□□□ 0.09
SMAD3-207ENST00000558763 PTGER2P43116 358 aa15.6■□□□□ 0.09
SMAD3-207ENST00000558763 KIAA1211Q6ZU35 1233 aa15.6■□□□□ 0.09
SMAD3-207ENST00000558763 CELF1Q92879 486 aaKnown RBP15.6■□□□□ 0.09
SMAD3-207ENST00000558763 SGIP1Q9BQI5 828 aa15.6■□□□□ 0.09
SMAD3-207ENST00000558763 CNNM1Q9NRU3 951 aa15.6■□□□□ 0.09
SMAD3-207ENST00000558763 CHMP5Q9NZZ3 219 aa15.6■□□□□ 0.09
SMAD3-207ENST00000558763 FRAT2O75474 233 aaPredicted RBP15.6■□□□□ 0.09
SMAD3-207ENST00000558763 TICAM2Q86XR7 235 aa15.6■□□□□ 0.09
SMAD3-207ENST00000558763 KLHL34Q8N239 644 aa15.6■□□□□ 0.09
SMAD3-207ENST00000558763 CDC5LQ99459 802 aaKnown RBP15.6■□□□□ 0.09
SMAD3-207ENST00000558763 UPF3BQ9BZI7 483 aaKnown RBP15.6■□□□□ 0.09
SMAD3-207ENST00000558763 KLRG2A4D1S0 409 aaPredicted RBP15.59■□□□□ 0.09
SMAD3-207ENST00000558763 TAF5LO75529 589 aa15.59■□□□□ 0.09
SMAD3-207ENST00000558763 TTC14Q96N46 770 aa15.59■□□□□ 0.09
SMAD3-207ENST00000558763 SEC62Q99442 399 aaKnown RBP15.59■□□□□ 0.09
SMAD3-207ENST00000558763 PPP1R1BQ9UD71 204 aaPredicted RBP15.59■□□□□ 0.09
SMAD3-207ENST00000558763 RBM8AQ9Y5S9 174 aaKnown RBP15.59■□□□□ 0.09
SMAD3-207ENST00000558763 MROH5Q6ZUA9 1318 aa15.59■□□□□ 0.09
SMAD3-207ENST00000558763 SRGNP10124 158 aa15.58■□□□□ 0.09
SMAD3-207ENST00000558763 CHRNA5P30532 468 aa15.58■□□□□ 0.09
SMAD3-207ENST00000558763 IGHMBP2P38935 993 aaKnown RBP15.58■□□□□ 0.09
SMAD3-207ENST00000558763 SLFNL1Q499Z3 407 aa15.58■□□□□ 0.09
SMAD3-207ENST00000558763 C2CD5Q86YS7 1000 aa15.58■□□□□ 0.09
SMAD3-207ENST00000558763 ANKRD18AQ8IVF6 992 aa15.58■□□□□ 0.09
SMAD3-207ENST00000558763 MPHOSPH8Q99549 860 aa15.58■□□□□ 0.09
SMAD3-207ENST00000558763 SPON1Q9HCB6 807 aa15.58■□□□□ 0.09
SMAD3-207ENST00000558763 DOCK2Q92608 1830 aa15.58■□□□□ 0.08
SMAD3-207ENST00000558763 PRPF40BQ6NWY9 871 aaKnown RBP15.58■□□□□ 0.08
SMAD3-207ENST00000558763 RBM17Q96I25 401 aaKnown RBP15.58■□□□□ 0.08
SMAD3-207ENST00000558763 ZNF512BQ96KM6 892 aaPredicted RBP15.58■□□□□ 0.08
SMAD3-207ENST00000558763 CIZ1Q9ULV3 898 aaPredicted RBP15.58■□□□□ 0.08
SMAD3-207ENST00000558763 RPAP1Q9BWH6 1393 aaPredicted RBP15.58■□□□□ 0.08
SMAD3-207ENST00000558763 CACNA1SQ13698 1873 aa15.58■□□□□ 0.08
SMAD3-207ENST00000558763 KIF13BQ9NQT8 1826 aa15.57■□□□□ 0.08
SMAD3-207ENST00000558763 H0YIN7 160 aa15.57■□□□□ 0.08
SMAD3-207ENST00000558763 MCAMP43121 646 aa15.57■□□□□ 0.08
SMAD3-207ENST00000558763 COL9A3Q14050 684 aaPredicted RBP15.57■□□□□ 0.08
SMAD3-207ENST00000558763 ADCK5Q3MIX3 580 aa15.57■□□□□ 0.08
SMAD3-207ENST00000558763 PI16Q6UXB8 463 aa15.57■□□□□ 0.08
SMAD3-207ENST00000558763 CCDC129Q6ZRS4 1044 aa15.57■□□□□ 0.08
SMAD3-207ENST00000558763 FOXD4L1Q9NU39 408 aa15.57■□□□□ 0.08
SMAD3-207ENST00000558763 TAF6LQ9Y6J9 622 aa15.57■□□□□ 0.08
SMAD3-207ENST00000558763 RPS8P62241 208 aaKnown RBP15.56■□□□□ 0.08
SMAD3-207ENST00000558763 GRAPQ13588 217 aa15.56■□□□□ 0.08
SMAD3-207ENST00000558763 CCDC158Q5M9N0 1113 aa15.56■□□□□ 0.08
SMAD3-207ENST00000558763 TTC39AQ5SRH9 613 aa15.56■□□□□ 0.08
SMAD3-207ENST00000558763 ZMYM1Q5SVZ6 1142 aa15.56■□□□□ 0.08
SMAD3-207ENST00000558763 CREB3L3Q68CJ9 461 aa15.56■□□□□ 0.08
SMAD3-207ENST00000558763 SLC51AQ86UW1 340 aa15.56■□□□□ 0.08
SMAD3-207ENST00000558763 GRAPLQ8TC17 118 aaPredicted RBP15.56■□□□□ 0.08
SMAD3-207ENST00000558763 ZNF622Q969S3 477 aaKnown RBP eCLIP15.56■□□□□ 0.08
SMAD3-207ENST00000558763 TMX3Q96JJ7 454 aa15.56■□□□□ 0.08
SMAD3-207ENST00000558763 NPR1P16066 1061 aa15.56■□□□□ 0.08
SMAD3-207ENST00000558763 HOXA10P31260 410 aaPredicted RBP15.56■□□□□ 0.08
SMAD3-207ENST00000558763 PUM3Q15397 648 aaKnown RBP15.56■□□□□ 0.08
SMAD3-207ENST00000558763 HELBQ8NG08 1087 aaPredicted RBP15.56■□□□□ 0.08
SMAD3-207ENST00000558763 SNAP23O00161 211 aa15.55■□□□□ 0.08
SMAD3-207ENST00000558763 SLC27A2O14975 620 aa15.55■□□□□ 0.08
SMAD3-207ENST00000558763 ARID4AP29374 1257 aaPredicted RBP15.55■□□□□ 0.08
SMAD3-207ENST00000558763 ZAP70P43403 619 aa15.55■□□□□ 0.08
SMAD3-207ENST00000558763 CUL4AQ13619 759 aa15.55■□□□□ 0.08
SMAD3-207ENST00000558763 MCMDC2Q4G0Z9 681 aa15.55■□□□□ 0.08
SMAD3-207ENST00000558763 IL27Q8NEV9 243 aa15.55■□□□□ 0.08
SMAD3-207ENST00000558763 LPIN2Q92539 896 aa15.55■□□□□ 0.08
SMAD3-207ENST00000558763 MASTLQ96GX5 879 aa15.55■□□□□ 0.08
SMAD3-207ENST00000558763 PHKA1P46020 1223 aa15.55■□□□□ 0.08
SMAD3-207ENST00000558763 MCM2P49736 904 aa15.55■□□□□ 0.08
SMAD3-207ENST00000558763 RAB3GAP1Q15042 981 aa15.55■□□□□ 0.08
SMAD3-207ENST00000558763 GORABQ5T7V8 394 aa15.55■□□□□ 0.08
SMAD3-207ENST00000558763 ZGPATQ8N5A5 531 aaKnown RBP15.55■□□□□ 0.08
SMAD3-207ENST00000558763 TM6SF1Q9BZW5 370 aa15.55■□□□□ 0.08
SMAD3-207ENST00000558763 MAST3O60307 1309 aa15.54■□□□□ 0.08
SMAD3-207ENST00000558763 LAMA4Q16363 1823 aa15.54■□□□□ 0.08
SMAD3-207ENST00000558763 DLEC1Q9Y238 1755 aa15.54■□□□□ 0.08
SMAD3-207ENST00000558763 A0A0G2JLW4 131 aa15.54■□□□□ 0.08
SMAD3-207ENST00000558763 CPA1P15085 419 aa15.54■□□□□ 0.08
SMAD3-207ENST00000558763 FKBP4Q02790 459 aaKnown RBP eCLIP15.54■□□□□ 0.08
SMAD3-207ENST00000558763 CCDC102BQ68D86 513 aa15.54■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 90.3 ms