RNA–Protein interactions for RNA: ENST00000556958.5

ATXN3-245, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 769 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-245ENST00000556958 DEFB123Q8N688 67 aa7.82□□□□□ -1.16
ATXN3-245ENST00000556958 ZNF333Q96JL9 665 aa7.82□□□□□ -1.16
ATXN3-245ENST00000556958 NBPF3Q9H094 633 aa7.82□□□□□ -1.16
ATXN3-245ENST00000556958 PRO3102Q9H379 93 aa7.82□□□□□ -1.16
ATXN3-245ENST00000556958 AFDNP55196 1824 aaKnown RBP7.82□□□□□ -1.16
ATXN3-245ENST00000556958 HEG1Q9ULI3 1381 aa7.82□□□□□ -1.16
ATXN3-245ENST00000556958 SHTN1A0MZ66 631 aa7.81□□□□□ -1.16
ATXN3-245ENST00000556958 UBE2Q2LH0YL09 131 aa7.81□□□□□ -1.16
ATXN3-245ENST00000556958 BBOX1O75936 387 aa7.81□□□□□ -1.16
ATXN3-245ENST00000556958 COL9A1P20849 921 aa7.81□□□□□ -1.16
ATXN3-245ENST00000556958 NF2P35240 595 aa7.81□□□□□ -1.16
ATXN3-245ENST00000556958 TEFQ10587 303 aa7.81□□□□□ -1.16
ATXN3-245ENST00000556958 DSG2Q14126 1118 aa7.81□□□□□ -1.16
ATXN3-245ENST00000556958 SLC9C1Q4G0N8 1177 aa7.81□□□□□ -1.16
ATXN3-245ENST00000556958 OTUD7BQ6GQQ9 843 aa7.81□□□□□ -1.16
ATXN3-245ENST00000556958 R3HDMLQ9H3Y0 253 aa7.81□□□□□ -1.16
ATXN3-245ENST00000556958 GGA3Q9NZ52 723 aa7.81□□□□□ -1.16
ATXN3-245ENST00000556958 CEP290O15078 2479 aa7.8□□□□□ -1.16
ATXN3-245ENST00000556958 TTLL12Q14166 644 aaPredicted RBP7.8□□□□□ -1.16
ATXN3-245ENST00000556958 KIF4BQ2VIQ3 1234 aa7.8□□□□□ -1.16
ATXN3-245ENST00000556958 SP8Q8IXZ3 490 aa7.8□□□□□ -1.16
ATXN3-245ENST00000556958 NKX2-3Q8TAU0 364 aa7.8□□□□□ -1.16
ATXN3-245ENST00000556958 NECTIN2Q92692 538 aa7.8□□□□□ -1.16
ATXN3-245ENST00000556958 LRCH3Q96II8 777 aa7.8□□□□□ -1.16
ATXN3-245ENST00000556958 SIN3AQ96ST3 1273 aa7.8□□□□□ -1.16
ATXN3-245ENST00000556958 COL4A5P29400 1685 aa7.79□□□□□ -1.16
ATXN3-245ENST00000556958 TRPM7Q96QT4 1865 aa7.79□□□□□ -1.16
ATXN3-245ENST00000556958 MANSC4A6NHS7 340 aaPredicted RBP7.79□□□□□ -1.16
ATXN3-245ENST00000556958 PSMD14O00487 310 aa7.79□□□□□ -1.16
ATXN3-245ENST00000556958 SOX1O00570 391 aaPredicted RBP7.79□□□□□ -1.16
ATXN3-245ENST00000556958 EGFRP00533 1210 aa7.79□□□□□ -1.16
ATXN3-245ENST00000556958 SP3Q02447 781 aa7.79□□□□□ -1.16
ATXN3-245ENST00000556958 ARMC9Q7Z3E5 817 aa7.79□□□□□ -1.16
ATXN3-245ENST00000556958 NUTM1Q86Y26 1132 aa7.79□□□□□ -1.16
ATXN3-245ENST00000556958 FAM122AQ96E09 287 aa7.79□□□□□ -1.16
ATXN3-245ENST00000556958 NLRP3Q96P20 1036 aa7.79□□□□□ -1.16
ATXN3-245ENST00000556958 GPHNQ9NQX3 736 aaPredicted RBP7.79□□□□□ -1.16
ATXN3-245ENST00000556958 COL6A3P12111 3177 aa7.78□□□□□ -1.16
ATXN3-245ENST00000556958 WTIPA6NIX2 430 aaPredicted RBP7.78□□□□□ -1.16
ATXN3-245ENST00000556958 YDJCA8MPS7 323 aa7.78□□□□□ -1.16
ATXN3-245ENST00000556958 FOSBP53539 338 aa7.78□□□□□ -1.16
ATXN3-245ENST00000556958 KCNC4Q03721 635 aa7.78□□□□□ -1.16
ATXN3-245ENST00000556958 SCARF1Q14162 830 aa7.78□□□□□ -1.16
ATXN3-245ENST00000556958 ANGEL2Q5VTE6 544 aaKnown RBP7.78□□□□□ -1.16
ATXN3-245ENST00000556958 CD99L2Q8TCZ2 262 aa7.78□□□□□ -1.16
ATXN3-245ENST00000556958 ZNF775Q96BV0 537 aaPredicted RBP7.78□□□□□ -1.16
ATXN3-245ENST00000556958 MTMR10Q9NXD2 777 aa7.78□□□□□ -1.16
ATXN3-245ENST00000556958 USP16Q9Y5T5 823 aa7.78□□□□□ -1.16
ATXN3-245ENST00000556958 TJP1Q07157 1748 aa7.78□□□□□ -1.16
ATXN3-245ENST00000556958 RANBP2P49792 3224 aaKnown RBP7.77□□□□□ -1.17
ATXN3-245ENST00000556958 KIAA0100Q14667 2235 aaKnown RBP7.77□□□□□ -1.17
ATXN3-245ENST00000556958 ZBTB7BO15156 539 aaPredicted RBP7.77□□□□□ -1.17
ATXN3-245ENST00000556958 PLA2G5P39877 138 aa7.77□□□□□ -1.17
ATXN3-245ENST00000556958 BCAMP50895 628 aa7.77□□□□□ -1.17
ATXN3-245ENST00000556958 WASHC4Q2M389 1173 aa7.77□□□□□ -1.17
ATXN3-245ENST00000556958 SPRYD7Q5W111 196 aa7.77□□□□□ -1.17
ATXN3-245ENST00000556958 ZNF787Q6DD87 383 aa7.77□□□□□ -1.17
ATXN3-245ENST00000556958 MOB2Q70IA6 237 aa7.77□□□□□ -1.17
ATXN3-245ENST00000556958 ANKK1Q8NFD2 765 aa7.77□□□□□ -1.17
ATXN3-245ENST00000556958 OXER1Q8TDS5 423 aa7.77□□□□□ -1.17
ATXN3-245ENST00000556958 SYMPKQ92797 1274 aaKnown RBP7.77□□□□□ -1.17
ATXN3-245ENST00000556958 COL11A2P13942 1736 aaPredicted RBP7.77□□□□□ -1.17
ATXN3-245ENST00000556958 ANKRD31Q8N7Z5 1873 aa7.77□□□□□ -1.17
ATXN3-245ENST00000556958 ERBB4Q15303 1308 aa7.77□□□□□ -1.17
ATXN3-245ENST00000556958 ERVV-1B6SEH8 477 aa7.76□□□□□ -1.17
ATXN3-245ENST00000556958 SNRPA1P09661 255 aaKnown RBP7.76□□□□□ -1.17
ATXN3-245ENST00000556958 HLFQ16534 295 aa7.76□□□□□ -1.17
ATXN3-245ENST00000556958 MTHFSDQ2M296 383 aaKnown RBP7.76□□□□□ -1.17
ATXN3-245ENST00000556958 TMC4Q7Z404 712 aa7.76□□□□□ -1.17
ATXN3-245ENST00000556958 SLC10A4Q96EP9 437 aa7.76□□□□□ -1.17
ATXN3-245ENST00000556958 MRC1P22897 1456 aa7.75□□□□□ -1.17
ATXN3-245ENST00000556958 NRG2O14511 850 aaPredicted RBP7.75□□□□□ -1.17
ATXN3-245ENST00000556958 EVI5O60447 810 aa7.75□□□□□ -1.17
ATXN3-245ENST00000556958 MYCP01106 439 aaPredicted RBP7.75□□□□□ -1.17
ATXN3-245ENST00000556958 VIL1P09327 827 aaKnown RBP7.75□□□□□ -1.17
ATXN3-245ENST00000556958 IL13P35225 146 aa7.75□□□□□ -1.17
ATXN3-245ENST00000556958 PIP4K2AP48426 406 aaPredicted RBP7.75□□□□□ -1.17
ATXN3-245ENST00000556958 PTPN12Q05209 780 aaKnown RBP7.75□□□□□ -1.17
ATXN3-245ENST00000556958 PPP1R42Q7Z4L9 355 aa7.75□□□□□ -1.17
ATXN3-245ENST00000556958 STAP2Q9UGK3 403 aa7.75□□□□□ -1.17
ATXN3-245ENST00000556958 BCORQ6W2J9 1755 aa7.74□□□□□ -1.17
ATXN3-245ENST00000556958 ABCC12Q96J65 1359 aa7.74□□□□□ -1.17
ATXN3-245ENST00000556958 BTBD11A6QL63 1104 aa7.74□□□□□ -1.17
ATXN3-245ENST00000556958 ZBTB48P10074 688 aaPredicted RBP7.74□□□□□ -1.17
ATXN3-245ENST00000556958 CAPN2P17655 700 aa7.74□□□□□ -1.17
ATXN3-245ENST00000556958 BMP8BP34820 402 aa7.74□□□□□ -1.17
ATXN3-245ENST00000556958 ZNF280AP59817 542 aaPredicted RBP7.74□□□□□ -1.17
ATXN3-245ENST00000556958 LRIT3Q3SXY7 679 aa7.74□□□□□ -1.17
ATXN3-245ENST00000556958 DDX46Q7L014 1031 aaKnown RBP7.74□□□□□ -1.17
ATXN3-245ENST00000556958 Q7L0L9 218 aa7.74□□□□□ -1.17
ATXN3-245ENST00000556958 AGBL3Q8NEM8 1001 aa7.74□□□□□ -1.17
ATXN3-245ENST00000556958 EYA3Q99504 573 aa7.74□□□□□ -1.17
ATXN3-245ENST00000556958 DBNDD1Q9H9R9 158 aa7.74□□□□□ -1.17
ATXN3-245ENST00000556958 PTCH2Q9Y6C5 1203 aa7.74□□□□□ -1.17
ATXN3-245ENST00000556958 RIC1Q4ADV7 1423 aa7.74□□□□□ -1.17
ATXN3-245ENST00000556958 ASTN2O75129 1339 aaPredicted RBP7.74□□□□□ -1.17
ATXN3-245ENST00000556958 SOWAHBA6NEL2 793 aa7.73□□□□□ -1.17
ATXN3-245ENST00000556958 UNCXA6NJT0 531 aa7.73□□□□□ -1.17
ATXN3-245ENST00000556958 GNAT3A8MTJ3 354 aa7.73□□□□□ -1.17
ATXN3-245ENST00000556958 WDHD1O75717 1129 aaPredicted RBP7.73□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 57.4 ms