RNA–Protein interactions for RNA: ENST00000556622.1

CPSF2-205, Transcript of cleavage and polyadenylation specific factor 2, humanhuman

TSL 5

Gene CPSF2, Length 469 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF2-205ENST00000556622 LAMC1P11047 1609 aa8.03□□□□□ -1.12
CPSF2-205ENST00000556622 STRCP1A6NGW2 1772 aa8.03□□□□□ -1.12
CPSF2-205ENST00000556622 PIK3R4Q99570 1358 aa8.03□□□□□ -1.12
CPSF2-205ENST00000556622 BACH1O14867 736 aa8.03□□□□□ -1.12
CPSF2-205ENST00000556622 ATF3P18847 181 aa8.03□□□□□ -1.12
CPSF2-205ENST00000556622 EPHA4P54764 986 aa8.03□□□□□ -1.12
CPSF2-205ENST00000556622 TMF1P82094 1093 aa8.03□□□□□ -1.12
CPSF2-205ENST00000556622 OGFOD1Q8N543 542 aa8.03□□□□□ -1.12
CPSF2-205ENST00000556622 DCAF11Q8TEB1 546 aa8.03□□□□□ -1.12
CPSF2-205ENST00000556622 C19orf44Q9H6X5 657 aa8.03□□□□□ -1.12
CPSF2-205ENST00000556622 RUBCNLQ9H714 662 aa8.03□□□□□ -1.12
CPSF2-205ENST00000556622 SLAIN2Q9P270 581 aa8.03□□□□□ -1.12
CPSF2-205ENST00000556622 IQSEC3Q9UPP2 1182 aaPredicted RBP8.03□□□□□ -1.12
CPSF2-205ENST00000556622 KIAA1024Q9UPX6 916 aa8.03□□□□□ -1.12
CPSF2-205ENST00000556622 ADGRF5Q8IZF2 1346 aa8.03□□□□□ -1.12
CPSF2-205ENST00000556622 MSH6P52701 1360 aa8.02□□□□□ -1.13
CPSF2-205ENST00000556622 A6NJY4 79 aa8.02□□□□□ -1.13
CPSF2-205ENST00000556622 HSPA1LP34931 641 aa8.02□□□□□ -1.13
CPSF2-205ENST00000556622 CCDC102BQ68D86 513 aa8.02□□□□□ -1.13
CPSF2-205ENST00000556622 DNAAF2Q9NVR5 837 aaKnown RBP8.02□□□□□ -1.13
CPSF2-205ENST00000556622 ZNF358Q9NW07 568 aa8.02□□□□□ -1.13
CPSF2-205ENST00000556622 NOP53Q9NZM5 478 aaKnown RBP8.02□□□□□ -1.13
CPSF2-205ENST00000556622 STK26Q9P289 416 aa8.02□□□□□ -1.13
CPSF2-205ENST00000556622 CHD2O14647 1828 aaKnown RBP8.01□□□□□ -1.13
CPSF2-205ENST00000556622 METP08581 1390 aa8.01□□□□□ -1.13
CPSF2-205ENST00000556622 GPRASP1Q5JY77 1395 aa8.01□□□□□ -1.13
CPSF2-205ENST00000556622 FAM196BA6NMK8 535 aa8.01□□□□□ -1.13
CPSF2-205ENST00000556622 BTBD11A6QL63 1104 aa8.01□□□□□ -1.13
CPSF2-205ENST00000556622 PIK3R2O00459 728 aa8.01□□□□□ -1.13
CPSF2-205ENST00000556622 LMOD1P29536 600 aaPredicted RBP8.01□□□□□ -1.13
CPSF2-205ENST00000556622 GATA4P43694 442 aa8.01□□□□□ -1.13
CPSF2-205ENST00000556622 PTK7Q13308 1070 aa8.01□□□□□ -1.13
CPSF2-205ENST00000556622 NKAPLQ5M9Q1 402 aa8.01□□□□□ -1.13
CPSF2-205ENST00000556622 TMEM132EQ6IEE7 984 aa8.01□□□□□ -1.13
CPSF2-205ENST00000556622 RHBDD1Q8TEB9 315 aa8.01□□□□□ -1.13
CPSF2-205ENST00000556622 PNISRQ8TF01 805 aaKnown RBP8.01□□□□□ -1.13
CPSF2-205ENST00000556622 CCDC136Q96JN2 1154 aa8.01□□□□□ -1.13
CPSF2-205ENST00000556622 VRTNQ9H8Y1 702 aa8.01□□□□□ -1.13
CPSF2-205ENST00000556622 ATXN7L1Q9ULK2 861 aaPredicted RBP8.01□□□□□ -1.13
CPSF2-205ENST00000556622 EIF3AQ14152 1382 aaKnown RBP8□□□□□ -1.13
CPSF2-205ENST00000556622 NEXMIFQ5QGS0 1516 aa8□□□□□ -1.13
CPSF2-205ENST00000556622 NEURL1BA8MQ27 555 aa8□□□□□ -1.13
CPSF2-205ENST00000556622 BNIP3LO60238 219 aa8□□□□□ -1.13
CPSF2-205ENST00000556622 FGFR3P22607 806 aa8□□□□□ -1.13
CPSF2-205ENST00000556622 TLR1Q15399 786 aa8□□□□□ -1.13
CPSF2-205ENST00000556622 ARTNQ5T4W7 220 aa8□□□□□ -1.13
CPSF2-205ENST00000556622 SERBP1Q8NC51 408 aaKnown RBP eCLIP8□□□□□ -1.13
CPSF2-205ENST00000556622 ZFP64Q9NPA5 681 aa8□□□□□ -1.13
CPSF2-205ENST00000556622 NDFIP2Q9NV92 336 aa8□□□□□ -1.13
CPSF2-205ENST00000556622 SCHIP1Q9P0W5 487 aaPredicted RBP8□□□□□ -1.13
CPSF2-205ENST00000556622 RNF123Q5XPI4 1314 aa8□□□□□ -1.13
CPSF2-205ENST00000556622 RASA1P20936 1047 aa7.99□□□□□ -1.13
CPSF2-205ENST00000556622 ANP32AP39687 249 aaKnown RBP7.99□□□□□ -1.13
CPSF2-205ENST00000556622 C4orf17Q53FE4 359 aa7.99□□□□□ -1.13
CPSF2-205ENST00000556622 TMEM214Q6NUQ4 689 aaKnown RBP7.99□□□□□ -1.13
CPSF2-205ENST00000556622 POTEAQ6S8J7 498 aa7.99□□□□□ -1.13
CPSF2-205ENST00000556622 CHSY3Q70JA7 882 aa7.99□□□□□ -1.13
CPSF2-205ENST00000556622 GOLGA6L2Q8N9W4 650 aaPredicted RBP7.99□□□□□ -1.13
CPSF2-205ENST00000556622 PTPRUQ92729 1446 aa7.99□□□□□ -1.13
CPSF2-205ENST00000556622 TRIM11Q96F44 468 aa7.99□□□□□ -1.13
CPSF2-205ENST00000556622 POLR3GLQ9BT43 218 aa7.99□□□□□ -1.13
CPSF2-205ENST00000556622 C14orf93Q9H972 538 aaKnown RBP7.99□□□□□ -1.13
CPSF2-205ENST00000556622 SERPINA10Q9UK55 444 aa7.99□□□□□ -1.13
CPSF2-205ENST00000556622 DIP2AQ14689 1571 aa7.98□□□□□ -1.13
CPSF2-205ENST00000556622 NCOA3Q9Y6Q9 1424 aa7.98□□□□□ -1.13
CPSF2-205ENST00000556622 ST20-MTHFSA0A0A6YYL1 179 aa7.98□□□□□ -1.13
CPSF2-205ENST00000556622 A0A1B0GTH6 734 aa7.98□□□□□ -1.13
CPSF2-205ENST00000556622 MSX1P28360 303 aa7.98□□□□□ -1.13
CPSF2-205ENST00000556622 GNASQ5JWF2 1037 aa7.98□□□□□ -1.13
CPSF2-205ENST00000556622 WAPLQ7Z5K2 1190 aa7.98□□□□□ -1.13
CPSF2-205ENST00000556622 TPCN2Q8NHX9 752 aa7.98□□□□□ -1.13
CPSF2-205ENST00000556622 TPSG1Q9NRR2 321 aa7.98□□□□□ -1.13
CPSF2-205ENST00000556622 NKTRP30414 1462 aaKnown RBP7.98□□□□□ -1.13
CPSF2-205ENST00000556622 LRPPRCP42704 1394 aaKnown RBP7.97□□□□□ -1.13
CPSF2-205ENST00000556622 SETBP1Q9Y6X0 1596 aa7.97□□□□□ -1.13
CPSF2-205ENST00000556622 PRAG1Q86YV5 1406 aa7.97□□□□□ -1.13
CPSF2-205ENST00000556622 GTF2E1P29083 439 aaPredicted RBP7.97□□□□□ -1.13
CPSF2-205ENST00000556622 ELOAQ14241 798 aaKnown RBP7.97□□□□□ -1.13
CPSF2-205ENST00000556622 CRTC2Q53ET0 693 aaPredicted RBP7.97□□□□□ -1.13
CPSF2-205ENST00000556622 C1orf216Q8TAB5 229 aa7.97□□□□□ -1.13
CPSF2-205ENST00000556622 ARXQ96QS3 562 aa7.97□□□□□ -1.13
CPSF2-205ENST00000556622 NIFKQ9BYG3 293 aaKnown RBP7.97□□□□□ -1.13
CPSF2-205ENST00000556622 SERTAD1Q9UHV2 236 aa7.97□□□□□ -1.13
CPSF2-205ENST00000556622 PPLO60437 1756 aa7.97□□□□□ -1.13
CPSF2-205ENST00000556622 XIRP1Q702N8 1843 aaKnown RBP7.96□□□□□ -1.13
CPSF2-205ENST00000556622 ALKQ9UM73 1620 aa7.96□□□□□ -1.13
CPSF2-205ENST00000556622 FAM135BQ49AJ0 1406 aa7.96□□□□□ -1.13
CPSF2-205ENST00000556622 TCERG1O14776 1098 aaKnown RBP7.96□□□□□ -1.14
CPSF2-205ENST00000556622 DYRK3O43781 588 aa7.96□□□□□ -1.14
CPSF2-205ENST00000556622 ARAFP10398 606 aa7.96□□□□□ -1.14
CPSF2-205ENST00000556622 PSME1Q06323 249 aa7.96□□□□□ -1.14
CPSF2-205ENST00000556622 LBRQ14739 615 aaKnown RBP7.96□□□□□ -1.14
CPSF2-205ENST00000556622 TEAD4Q15561 434 aa7.96□□□□□ -1.14
CPSF2-205ENST00000556622 LARP1Q6PKG0 1096 aaKnown RBP7.96□□□□□ -1.14
CPSF2-205ENST00000556622 POGKQ9P215 609 aa7.96□□□□□ -1.14
CPSF2-205ENST00000556622 KLF15Q9UIH9 416 aa7.96□□□□□ -1.14
CPSF2-205ENST00000556622 HCN2Q9UL51 889 aa7.96□□□□□ -1.14
CPSF2-205ENST00000556622 USP17L15C9J2P7 530 aa7.95□□□□□ -1.14
CPSF2-205ENST00000556622 USP17L10C9JJH3 530 aa7.95□□□□□ -1.14
CPSF2-205ENST00000556622 USP17L13C9JLJ4 530 aa7.95□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms