RNA–Protein interactions for RNA: ENST00000554514.1

ARHGEF40-203, Transcript of Rho guanine nucleotide exchange factor 40, humanhuman

TSL 1 (best)

Gene ARHGEF40, Length 2,928 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF40-203ENST00000554514 CLSTN2Q9H4D0 955 aa18.46■□□□□ 0.55
ARHGEF40-203ENST00000554514 DDX19AQ9NUU7 478 aaKnown RBP18.46■□□□□ 0.55
ARHGEF40-203ENST00000554514 A0A087WWV3 80 aa18.46■□□□□ 0.55
ARHGEF40-203ENST00000554514 HMGB1P09429 215 aaKnown RBP18.46■□□□□ 0.55
ARHGEF40-203ENST00000554514 SCARF1Q14162 830 aa18.46■□□□□ 0.55
ARHGEF40-203ENST00000554514 FBXW7Q969H0 707 aa18.46■□□□□ 0.55
ARHGEF40-203ENST00000554514 XAGE2Q96GT9 111 aa18.46■□□□□ 0.55
ARHGEF40-203ENST00000554514 PYCARDQ9ULZ3 195 aa18.46■□□□□ 0.55
ARHGEF40-203ENST00000554514 GLI3P10071 1580 aa18.46■□□□□ 0.54
ARHGEF40-203ENST00000554514 CPDO75976 1380 aa18.45■□□□□ 0.54
ARHGEF40-203ENST00000554514 CCDC158Q5M9N0 1113 aa18.45■□□□□ 0.54
ARHGEF40-203ENST00000554514 KCNF1Q9H3M0 494 aa18.45■□□□□ 0.54
ARHGEF40-203ENST00000554514 OTUD7BQ6GQQ9 843 aa18.45■□□□□ 0.54
ARHGEF40-203ENST00000554514 TSC1Q92574 1164 aa18.45■□□□□ 0.54
ARHGEF40-203ENST00000554514 TMOD3Q9NYL9 352 aa18.45■□□□□ 0.54
ARHGEF40-203ENST00000554514 DNAJC10Q8IXB1 793 aa18.44■□□□□ 0.54
ARHGEF40-203ENST00000554514 CFAP45Q9UL16 551 aa18.44■□□□□ 0.54
ARHGEF40-203ENST00000554514 ASAP1Q9ULH1 1129 aa18.44■□□□□ 0.54
ARHGEF40-203ENST00000554514 KAT6BQ8WYB5 2073 aa18.44■□□□□ 0.54
ARHGEF40-203ENST00000554514 PTGS1P23219 599 aa18.44■□□□□ 0.54
ARHGEF40-203ENST00000554514 TERF1P54274 439 aa18.44■□□□□ 0.54
ARHGEF40-203ENST00000554514 SMARCC2Q8TAQ2 1214 aa18.44■□□□□ 0.54
ARHGEF40-203ENST00000554514 TRIM5Q9C035 493 aa18.44■□□□□ 0.54
ARHGEF40-203ENST00000554514 ZSCAN16Q9H4T2 348 aaPredicted RBP18.44■□□□□ 0.54
ARHGEF40-203ENST00000554514 GPR108Q9NPR9 543 aa18.44■□□□□ 0.54
ARHGEF40-203ENST00000554514 EXOSC10Q01780 885 aaKnown RBP18.43■□□□□ 0.54
ARHGEF40-203ENST00000554514 LAMB4A4D0S4 1761 aa18.43■□□□□ 0.54
ARHGEF40-203ENST00000554514 PDIA3P30101 505 aaKnown RBP18.43■□□□□ 0.54
ARHGEF40-203ENST00000554514 ZAP70P43403 619 aa18.43■□□□□ 0.54
ARHGEF40-203ENST00000554514 CCAR1Q8IX12 1150 aaKnown RBP18.43■□□□□ 0.54
ARHGEF40-203ENST00000554514 ERCC4Q92889 916 aaPredicted RBP18.43■□□□□ 0.54
ARHGEF40-203ENST00000554514 USP28Q96RU2 1077 aa18.43■□□□□ 0.54
ARHGEF40-203ENST00000554514 FAM177BA6PVY3 158 aa18.43■□□□□ 0.54
ARHGEF40-203ENST00000554514 TCIRG1Q13488 830 aa18.43■□□□□ 0.54
ARHGEF40-203ENST00000554514 ZNF165P49910 485 aa18.42■□□□□ 0.54
ARHGEF40-203ENST00000554514 KIF6Q6ZMV9 814 aa18.42■□□□□ 0.54
ARHGEF40-203ENST00000554514 NRBP1Q9UHY1 535 aa18.42■□□□□ 0.54
ARHGEF40-203ENST00000554514 DCCP43146 1447 aa18.42■□□□□ 0.54
ARHGEF40-203ENST00000554514 LAMA4Q16363 1823 aa18.42■□□□□ 0.54
ARHGEF40-203ENST00000554514 GOLGA6L6A8MZA4 724 aa18.41■□□□□ 0.54
ARHGEF40-203ENST00000554514 ME1P48163 572 aa18.41■□□□□ 0.54
ARHGEF40-203ENST00000554514 LLPHQ9BRT6 129 aaKnown RBP18.41■□□□□ 0.54
ARHGEF40-203ENST00000554514 KCPQ6ZWJ8 1503 aa18.41■□□□□ 0.54
ARHGEF40-203ENST00000554514 CIAO1O76071 339 aa18.41■□□□□ 0.54
ARHGEF40-203ENST00000554514 HMGN5P82970 282 aaKnown RBP18.41■□□□□ 0.54
ARHGEF40-203ENST00000554514 IFIT5Q13325 482 aaKnown RBP18.41■□□□□ 0.54
ARHGEF40-203ENST00000554514 PUS7LQ9H0K6 701 aaKnown RBP18.41■□□□□ 0.54
ARHGEF40-203ENST00000554514 GOLPH3LQ9H4A5 285 aa18.41■□□□□ 0.54
ARHGEF40-203ENST00000554514 ADD1P35611 737 aaKnown RBP18.4■□□□□ 0.54
ARHGEF40-203ENST00000554514 CCDC186Q7Z3E2 898 aa18.4■□□□□ 0.54
ARHGEF40-203ENST00000554514 ISCA1Q9BUE6 129 aa18.4■□□□□ 0.54
ARHGEF40-203ENST00000554514 TJP1Q07157 1748 aa18.4■□□□□ 0.54
ARHGEF40-203ENST00000554514 METTL24Q5JXM2 366 aa18.4■□□□□ 0.54
ARHGEF40-203ENST00000554514 GJB4Q9NTQ9 266 aa18.4■□□□□ 0.54
ARHGEF40-203ENST00000554514 COL5A2P05997 1499 aaPredicted RBP18.4■□□□□ 0.54
ARHGEF40-203ENST00000554514 A0A0G2JS52 829 aa18.39■□□□□ 0.54
ARHGEF40-203ENST00000554514 FGAP02671 866 aa18.39■□□□□ 0.54
ARHGEF40-203ENST00000554514 LRMPQ12912 555 aa18.39■□□□□ 0.54
ARHGEF40-203ENST00000554514 KIF3AQ9Y496 699 aa18.39■□□□□ 0.54
ARHGEF40-203ENST00000554514 POLR3DP05423 398 aaPredicted RBP18.39■□□□□ 0.53
ARHGEF40-203ENST00000554514 HLFQ16534 295 aa18.39■□□□□ 0.53
ARHGEF40-203ENST00000554514 IMMTQ16891 758 aaKnown RBP18.39■□□□□ 0.53
ARHGEF40-203ENST00000554514 NAA16Q6N069 864 aaPredicted RBP18.39■□□□□ 0.53
ARHGEF40-203ENST00000554514 SYTL4Q96C24 671 aaPredicted RBP18.39■□□□□ 0.53
ARHGEF40-203ENST00000554514 CARD10Q9BWT7 1032 aa18.39■□□□□ 0.53
ARHGEF40-203ENST00000554514 AKAP2Q9Y2D5 859 aa18.39■□□□□ 0.53
ARHGEF40-203ENST00000554514 ABCC6O95255 1503 aa18.39■□□□□ 0.53
ARHGEF40-203ENST00000554514 CCDC73Q6ZRK6 1079 aa18.39■□□□□ 0.53
ARHGEF40-203ENST00000554514 NUP188Q5SRE5 1749 aa18.38■□□□□ 0.53
ARHGEF40-203ENST00000554514 KLF18A0A0U1RQI7 1052 aa18.38■□□□□ 0.53
ARHGEF40-203ENST00000554514 PRC1O43663 620 aa18.38■□□□□ 0.53
ARHGEF40-203ENST00000554514 PIGBQ92521 554 aa18.38■□□□□ 0.53
ARHGEF40-203ENST00000554514 PDCL3Q9H2J4 239 aa18.38■□□□□ 0.53
ARHGEF40-203ENST00000554514 CARMIL3Q8ND23 1372 aa18.38■□□□□ 0.53
ARHGEF40-203ENST00000554514 GOLGA8BA8MQT2 603 aa18.38■□□□□ 0.53
ARHGEF40-203ENST00000554514 LDHAL6AQ6ZMR3 332 aa18.38■□□□□ 0.53
ARHGEF40-203ENST00000554514 C11orf57Q6ZUT1 292 aaPredicted RBP18.38■□□□□ 0.53
ARHGEF40-203ENST00000554514 FSIP1Q8NA03 581 aa18.38■□□□□ 0.53
ARHGEF40-203ENST00000554514 FOXP2O15409 715 aa18.37■□□□□ 0.53
ARHGEF40-203ENST00000554514 NKX1-1Q15270 411 aaPredicted RBP18.37■□□□□ 0.53
ARHGEF40-203ENST00000554514 ATP2B3Q16720 1220 aa18.37■□□□□ 0.53
ARHGEF40-203ENST00000554514 KIAA1524Q8TCG1 905 aa18.37■□□□□ 0.53
ARHGEF40-203ENST00000554514 GREM2Q9H772 168 aa18.37■□□□□ 0.53
ARHGEF40-203ENST00000554514 CNNM1Q9NRU3 951 aa18.37■□□□□ 0.53
ARHGEF40-203ENST00000554514 SLAIN2Q9P270 581 aa18.37■□□□□ 0.53
ARHGEF40-203ENST00000554514 DENND2AQ9ULE3 1009 aa18.37■□□□□ 0.53
ARHGEF40-203ENST00000554514 DYNC1I1O14576 645 aa18.37■□□□□ 0.53
ARHGEF40-203ENST00000554514 APPP05067 770 aa18.37■□□□□ 0.53
ARHGEF40-203ENST00000554514 FDPSP14324 419 aaKnown RBP18.37■□□□□ 0.53
ARHGEF40-203ENST00000554514 ILDR1Q86SU0 546 aaPredicted RBP18.37■□□□□ 0.53
ARHGEF40-203ENST00000554514 ZNF396Q96N95 335 aaPredicted RBP18.37■□□□□ 0.53
ARHGEF40-203ENST00000554514 ATG3Q9NT62 314 aa18.37■□□□□ 0.53
ARHGEF40-203ENST00000554514 PARP4Q9UKK3 1724 aaKnown RBP18.36■□□□□ 0.53
ARHGEF40-203ENST00000554514 KINO60870 393 aaKnown RBP18.36■□□□□ 0.53
ARHGEF40-203ENST00000554514 ITGA6P23229 1130 aa18.36■□□□□ 0.53
ARHGEF40-203ENST00000554514 GLIPR1L2Q4G1C9 344 aa18.36■□□□□ 0.53
ARHGEF40-203ENST00000554514 RBM43Q6ZSC3 357 aaKnown RBP18.36■□□□□ 0.53
ARHGEF40-203ENST00000554514 RALYLQ86SE5 291 aaKnown RBP18.36■□□□□ 0.53
ARHGEF40-203ENST00000554514 ZNF274Q96GC6 653 aaPredicted RBP18.36■□□□□ 0.53
ARHGEF40-203ENST00000554514 AGXT2Q9BYV1 514 aa18.36■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 75.3 ms