RNA–Protein interactions for RNA: ENST00000553099.5

RAB3IP-218, Transcript of RAB3A interacting protein, humanhuman

TSL 2 BASIC

Gene RAB3IP, Length 2,674 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IP-218ENST00000553099 SRP68Q9UHB9 627 aaKnown RBP10.84□□□□□ -0.67
RAB3IP-218ENST00000553099 LAMA4Q16363 1823 aa10.84□□□□□ -0.67
RAB3IP-218ENST00000553099 TCHHQ07283 1943 aa10.84□□□□□ -0.67
RAB3IP-218ENST00000553099 SCN7AQ01118 1682 aa10.84□□□□□ -0.67
RAB3IP-218ENST00000553099 PHF14O94880 888 aa10.84□□□□□ -0.67
RAB3IP-218ENST00000553099 KRT32Q14532 448 aa10.84□□□□□ -0.67
RAB3IP-218ENST00000553099 CCDC102BQ68D86 513 aa10.84□□□□□ -0.67
RAB3IP-218ENST00000553099 OSBP2Q969R2 916 aa10.84□□□□□ -0.67
RAB3IP-218ENST00000553099 SMC3Q9UQE7 1217 aa10.84□□□□□ -0.67
RAB3IP-218ENST00000553099 ZSCAN21Q9Y5A6 473 aaPredicted RBP10.84□□□□□ -0.67
RAB3IP-218ENST00000553099 TAF1LQ8IZX4 1826 aa10.84□□□□□ -0.67
RAB3IP-218ENST00000553099 ZPR1O75312 459 aa10.83□□□□□ -0.68
RAB3IP-218ENST00000553099 IDH1O75874 414 aaKnown RBP10.83□□□□□ -0.68
RAB3IP-218ENST00000553099 HSPD1P10809 573 aaKnown RBP10.83□□□□□ -0.68
RAB3IP-218ENST00000553099 SLC5A1P13866 664 aa10.83□□□□□ -0.68
RAB3IP-218ENST00000553099 RPS6KB1P23443 525 aa10.83□□□□□ -0.68
RAB3IP-218ENST00000553099 TBC1D9BQ66K14 1250 aa10.83□□□□□ -0.68
RAB3IP-218ENST00000553099 SEPT12Q8IYM1 358 aa10.83□□□□□ -0.68
RAB3IP-218ENST00000553099 NECAB1Q8N987 351 aa10.83□□□□□ -0.68
RAB3IP-218ENST00000553099 LPIN2Q92539 896 aa10.83□□□□□ -0.68
RAB3IP-218ENST00000553099 NEK1Q96PY6 1258 aa10.83□□□□□ -0.68
RAB3IP-218ENST00000553099 TRPC5Q9UL62 973 aaPredicted RBP10.83□□□□□ -0.68
RAB3IP-218ENST00000553099 ABCC12Q96J65 1359 aa10.83□□□□□ -0.68
RAB3IP-218ENST00000553099 NPHP1O15259 732 aa10.83□□□□□ -0.68
RAB3IP-218ENST00000553099 PTMSP20962 102 aa10.83□□□□□ -0.68
RAB3IP-218ENST00000553099 FGD1P98174 961 aa10.83□□□□□ -0.68
RAB3IP-218ENST00000553099 ME3Q16798 604 aa10.83□□□□□ -0.68
RAB3IP-218ENST00000553099 CLEC17AQ6ZS10 378 aa10.83□□□□□ -0.68
RAB3IP-218ENST00000553099 TPCN1Q9ULQ1 816 aa10.83□□□□□ -0.68
RAB3IP-218ENST00000553099 RTCBQ9Y3I0 505 aaKnown RBP10.83□□□□□ -0.68
RAB3IP-218ENST00000553099 ARAP2Q8WZ64 1704 aa10.83□□□□□ -0.68
RAB3IP-218ENST00000553099 BRD1O95696 1058 aa10.82□□□□□ -0.68
RAB3IP-218ENST00000553099 STK3Q13188 491 aa10.82□□□□□ -0.68
RAB3IP-218ENST00000553099 CCDC24Q8N4L8 307 aa10.82□□□□□ -0.68
RAB3IP-218ENST00000553099 ZSCAN31Q96LW9 406 aaPredicted RBP10.82□□□□□ -0.68
RAB3IP-218ENST00000553099 DSCC1Q9BVC3 393 aa10.82□□□□□ -0.68
RAB3IP-218ENST00000553099 DDX24Q9GZR7 859 aaKnown RBP eCLIP10.82□□□□□ -0.68
RAB3IP-218ENST00000553099 SH2B1Q9NRF2 756 aaPredicted RBP10.82□□□□□ -0.68
RAB3IP-218ENST00000553099 DDX49Q9Y6V7 483 aaKnown RBP10.82□□□□□ -0.68
RAB3IP-218ENST00000553099 A0A0G2JLW4 131 aa10.82□□□□□ -0.68
RAB3IP-218ENST00000553099 RPS6KA4O75676 772 aa10.82□□□□□ -0.68
RAB3IP-218ENST00000553099 ZFYP08048 801 aaPredicted RBP10.82□□□□□ -0.68
RAB3IP-218ENST00000553099 NCLP19338 710 aaKnown RBP10.82□□□□□ -0.68
RAB3IP-218ENST00000553099 C3orf67Q6ZVT6 689 aa10.82□□□□□ -0.68
RAB3IP-218ENST00000553099 LRRC2Q9BYS8 371 aa10.82□□□□□ -0.68
RAB3IP-218ENST00000553099 PUS7LQ9H0K6 701 aaKnown RBP10.82□□□□□ -0.68
RAB3IP-218ENST00000553099 LY75O60449 1722 aa10.82□□□□□ -0.68
RAB3IP-218ENST00000553099 COL4A1P02462 1669 aa10.82□□□□□ -0.68
RAB3IP-218ENST00000553099 GJB2P29033 226 aa10.81□□□□□ -0.68
RAB3IP-218ENST00000553099 ANKRD1Q15327 319 aa10.81□□□□□ -0.68
RAB3IP-218ENST00000553099 SKOR2Q2VWA4 1001 aaPredicted RBP10.81□□□□□ -0.68
RAB3IP-218ENST00000553099 TSGA10IPQ3SY00 556 aa10.81□□□□□ -0.68
RAB3IP-218ENST00000553099 SLC9C2Q5TAH2 1124 aa10.81□□□□□ -0.68
RAB3IP-218ENST00000553099 APPBP2Q92624 585 aa10.81□□□□□ -0.68
RAB3IP-218ENST00000553099 SETDB2Q96T68 719 aa10.81□□□□□ -0.68
RAB3IP-218ENST00000553099 CDC5LQ99459 802 aaKnown RBP10.81□□□□□ -0.68
RAB3IP-218ENST00000553099 BCL2L12Q9HB09 334 aa10.81□□□□□ -0.68
RAB3IP-218ENST00000553099 NARFQ9UHQ1 456 aa10.81□□□□□ -0.68
RAB3IP-218ENST00000553099 PRPF40AO75400 957 aaKnown RBP10.81□□□□□ -0.68
RAB3IP-218ENST00000553099 UQCRFS1P1P0C7P4 283 aa10.81□□□□□ -0.68
RAB3IP-218ENST00000553099 FGFR2P21802 821 aa10.81□□□□□ -0.68
RAB3IP-218ENST00000553099 CHRNDQ07001 517 aa10.81□□□□□ -0.68
RAB3IP-218ENST00000553099 TOB2Q14106 344 aaPredicted RBP10.81□□□□□ -0.68
RAB3IP-218ENST00000553099 TTF1Q15361 905 aaPredicted RBP10.81□□□□□ -0.68
RAB3IP-218ENST00000553099 TTLL5Q6EMB2 1281 aa10.81□□□□□ -0.68
RAB3IP-218ENST00000553099 AMIGO3Q86WK7 504 aa10.81□□□□□ -0.68
RAB3IP-218ENST00000553099 NBPF5PQ86XG9 351 aaPredicted RBP10.81□□□□□ -0.68
RAB3IP-218ENST00000553099 WDR33Q9C0J8 1336 aaKnown RBP10.81□□□□□ -0.68
RAB3IP-218ENST00000553099 ARID4AP29374 1257 aaPredicted RBP10.81□□□□□ -0.68
RAB3IP-218ENST00000553099 HAND2P61296 217 aa10.81□□□□□ -0.68
RAB3IP-218ENST00000553099 RC3H1Q5TC82 1133 aaKnown RBP10.81□□□□□ -0.68
RAB3IP-218ENST00000553099 STOX1Q6ZVD7 989 aa10.81□□□□□ -0.68
RAB3IP-218ENST00000553099 ANKRD18AQ8IVF6 992 aa10.81□□□□□ -0.68
RAB3IP-218ENST00000553099 QTRT2Q9H974 415 aaKnown RBP10.81□□□□□ -0.68
RAB3IP-218ENST00000553099 PIH1D3Q9NQM4 214 aaKnown RBP10.81□□□□□ -0.68
RAB3IP-218ENST00000553099 GPAA1O43292 621 aa10.8□□□□□ -0.68
RAB3IP-218ENST00000553099 ST3GAL1Q11201 340 aa10.8□□□□□ -0.68
RAB3IP-218ENST00000553099 Q6ZUG5 572 aa10.8□□□□□ -0.68
RAB3IP-218ENST00000553099 TICAM2Q86XR7 235 aa10.8□□□□□ -0.68
RAB3IP-218ENST00000553099 ARHGEF1Q92888 912 aaKnown RBP10.8□□□□□ -0.68
RAB3IP-218ENST00000553099 IQSEC3Q9UPP2 1182 aaPredicted RBP10.8□□□□□ -0.68
RAB3IP-218ENST00000553099 ATRNO75882 1429 aa10.8□□□□□ -0.68
RAB3IP-218ENST00000553099 C4AP0C0L4 1744 aa10.8□□□□□ -0.68
RAB3IP-218ENST00000553099 C4BP0C0L5 1744 aa10.8□□□□□ -0.68
RAB3IP-218ENST00000553099 RTL9Q8NET4 1388 aa10.8□□□□□ -0.68
RAB3IP-218ENST00000553099 STX6O43752 255 aa10.8□□□□□ -0.68
RAB3IP-218ENST00000553099 SYT1P21579 422 aa10.8□□□□□ -0.68
RAB3IP-218ENST00000553099 RFC4P35249 363 aa10.8□□□□□ -0.68
RAB3IP-218ENST00000553099 BCAMP50895 628 aa10.8□□□□□ -0.68
RAB3IP-218ENST00000553099 RASGRF1Q13972 1273 aa10.8□□□□□ -0.68
RAB3IP-218ENST00000553099 ZSCAN25Q6NSZ9 544 aa10.8□□□□□ -0.68
RAB3IP-218ENST00000553099 SPATA5Q8NB90 893 aa10.8□□□□□ -0.68
RAB3IP-218ENST00000553099 ADD2P35612 726 aa10.79□□□□□ -0.68
RAB3IP-218ENST00000553099 BRF1Q92994 677 aa10.79□□□□□ -0.68
RAB3IP-218ENST00000553099 ZNF512BQ96KM6 892 aaPredicted RBP10.79□□□□□ -0.68
RAB3IP-218ENST00000553099 NYXQ9GZU5 481 aa10.79□□□□□ -0.68
RAB3IP-218ENST00000553099 LMBRD1Q9NUN5 540 aa10.79□□□□□ -0.68
RAB3IP-218ENST00000553099 WWC3Q9ULE0 1092 aa10.79□□□□□ -0.68
RAB3IP-218ENST00000553099 NAP1L2Q9ULW6 460 aaPredicted RBP10.79□□□□□ -0.68
RAB3IP-218ENST00000553099 ZNF532Q9HCE3 1301 aa10.79□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms