RNA–Protein interactions for RNA: ENST00000551641.5

RAB3IP-215, Transcript of RAB3A interacting protein, humanhuman

TSL 1 (best) BASIC

Gene RAB3IP, Length 2,840 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IP-215ENST00000551641 TSGA10IPQ3SY00 556 aa9.65□□□□□ -0.86
RAB3IP-215ENST00000551641 NARFQ9UHQ1 456 aa9.65□□□□□ -0.86
RAB3IP-215ENST00000551641 MTMR6Q9Y217 621 aa9.65□□□□□ -0.86
RAB3IP-215ENST00000551641 RFX7Q2KHR2 1363 aa9.65□□□□□ -0.86
RAB3IP-215ENST00000551641 GJB2P29033 226 aa9.65□□□□□ -0.86
RAB3IP-215ENST00000551641 R3HDM1Q15032 1099 aaKnown RBP9.65□□□□□ -0.86
RAB3IP-215ENST00000551641 ERFEQ4G0M1 354 aa9.65□□□□□ -0.86
RAB3IP-215ENST00000551641 PDZRN4Q6ZMN7 1036 aaPredicted RBP9.65□□□□□ -0.86
RAB3IP-215ENST00000551641 FAM227BQ96M60 508 aa9.65□□□□□ -0.86
RAB3IP-215ENST00000551641 COPRSQ9NQ92 184 aa9.65□□□□□ -0.86
RAB3IP-215ENST00000551641 TLR7Q9NYK1 1049 aaKnown RBP9.65□□□□□ -0.86
RAB3IP-215ENST00000551641 CCDC39Q9UFE4 941 aa9.65□□□□□ -0.86
RAB3IP-215ENST00000551641 SLC27A2O14975 620 aa9.64□□□□□ -0.87
RAB3IP-215ENST00000551641 ZBTB7AO95365 584 aa9.64□□□□□ -0.87
RAB3IP-215ENST00000551641 PSMA5P28066 241 aa9.64□□□□□ -0.87
RAB3IP-215ENST00000551641 RFX5P48382 616 aaPredicted RBP9.64□□□□□ -0.87
RAB3IP-215ENST00000551641 ME3Q16798 604 aa9.64□□□□□ -0.87
RAB3IP-215ENST00000551641 TAF7LQ5H9L4 462 aa9.64□□□□□ -0.87
RAB3IP-215ENST00000551641 RC3H1Q5TC82 1133 aaKnown RBP9.64□□□□□ -0.87
RAB3IP-215ENST00000551641 CCDC83Q8IWF9 413 aa9.64□□□□□ -0.87
RAB3IP-215ENST00000551641 CCDC191Q8NCU4 936 aa9.64□□□□□ -0.87
RAB3IP-215ENST00000551641 LARP6Q9BRS8 491 aaKnown RBP9.64□□□□□ -0.87
RAB3IP-215ENST00000551641 UTP14AQ9BVJ6 771 aaKnown RBP9.64□□□□□ -0.87
RAB3IP-215ENST00000551641 ATF5Q9Y2D1 282 aaPredicted RBP9.64□□□□□ -0.87
RAB3IP-215ENST00000551641 LAMB4A4D0S4 1761 aa9.64□□□□□ -0.87
RAB3IP-215ENST00000551641 A0A0D9SFI3 127 aa9.64□□□□□ -0.87
RAB3IP-215ENST00000551641 NFIXQ14938 502 aa9.64□□□□□ -0.87
RAB3IP-215ENST00000551641 SLC15A2Q16348 729 aa9.64□□□□□ -0.87
RAB3IP-215ENST00000551641 CSPP1Q1MSJ5 1256 aa9.64□□□□□ -0.87
RAB3IP-215ENST00000551641 RABL6Q3YEC7 729 aaPredicted RBP9.64□□□□□ -0.87
RAB3IP-215ENST00000551641 HSP90AB3PQ58FF7 597 aa9.64□□□□□ -0.87
RAB3IP-215ENST00000551641 ISCA1Q9BUE6 129 aa9.64□□□□□ -0.87
RAB3IP-215ENST00000551641 CCDC8Q9H0W5 538 aaPredicted RBP9.64□□□□□ -0.87
RAB3IP-215ENST00000551641 DCAF8L1A6NGE4 600 aa9.64□□□□□ -0.87
RAB3IP-215ENST00000551641 FOXD4L6Q3SYB3 417 aaPredicted RBP9.64□□□□□ -0.87
RAB3IP-215ENST00000551641 FOXD4L3Q6VB84 417 aaPredicted RBP9.64□□□□□ -0.87
RAB3IP-215ENST00000551641 RNF214Q8ND24 703 aa9.64□□□□□ -0.87
RAB3IP-215ENST00000551641 UPF1Q92900 1129 aaKnown RBP eCLIP9.64□□□□□ -0.87
RAB3IP-215ENST00000551641 TPCN1Q9ULQ1 816 aa9.64□□□□□ -0.87
RAB3IP-215ENST00000551641 ERVV-1B6SEH8 477 aa9.63□□□□□ -0.87
RAB3IP-215ENST00000551641 GYS1P13807 737 aa9.63□□□□□ -0.87
RAB3IP-215ENST00000551641 FUCA2Q9BTY2 467 aa9.63□□□□□ -0.87
RAB3IP-215ENST00000551641 HMG20BQ9P0W2 317 aa9.63□□□□□ -0.87
RAB3IP-215ENST00000551641 ATP5JP18859 108 aa9.63□□□□□ -0.87
RAB3IP-215ENST00000551641 ANKRD1Q15327 319 aa9.63□□□□□ -0.87
RAB3IP-215ENST00000551641 RNF20Q5VTR2 975 aa9.63□□□□□ -0.87
RAB3IP-215ENST00000551641 C3orf67Q6ZVT6 689 aa9.63□□□□□ -0.87
RAB3IP-215ENST00000551641 ZNF34Q8IZ26 560 aa9.63□□□□□ -0.87
RAB3IP-215ENST00000551641 AKT1S1Q96B36 256 aa9.63□□□□□ -0.87
RAB3IP-215ENST00000551641 BOLA2Q9H3K6 86 aa9.63□□□□□ -0.87
RAB3IP-215ENST00000551641 ZNF219Q9P2Y4 722 aaPredicted RBP9.63□□□□□ -0.87
RAB3IP-215ENST00000551641 C4BP0C0L5 1744 aa9.62□□□□□ -0.87
RAB3IP-215ENST00000551641 PNPLA7Q6ZV29 1317 aa9.62□□□□□ -0.87
RAB3IP-215ENST00000551641 H7C1W4 665 aa9.62□□□□□ -0.87
RAB3IP-215ENST00000551641 MMP10P09238 476 aa9.62□□□□□ -0.87
RAB3IP-215ENST00000551641 RPS6KB1P23443 525 aa9.62□□□□□ -0.87
RAB3IP-215ENST00000551641 ZBTB38Q8NAP3 1195 aaPredicted RBP9.62□□□□□ -0.87
RAB3IP-215ENST00000551641 FSD1Q9BTV5 496 aa9.62□□□□□ -0.87
RAB3IP-215ENST00000551641 SEC31BQ9NQW1 1179 aa9.62□□□□□ -0.87
RAB3IP-215ENST00000551641 SH3TC1Q8TE82 1336 aa9.62□□□□□ -0.87
RAB3IP-215ENST00000551641 NPM3O75607 178 aaKnown RBP9.62□□□□□ -0.87
RAB3IP-215ENST00000551641 CASP7P55210 303 aa9.62□□□□□ -0.87
RAB3IP-215ENST00000551641 PTPN12Q05209 780 aaKnown RBP9.62□□□□□ -0.87
RAB3IP-215ENST00000551641 HELBQ8NG08 1087 aaPredicted RBP9.62□□□□□ -0.87
RAB3IP-215ENST00000551641 GREM2Q9H772 168 aa9.62□□□□□ -0.87
RAB3IP-215ENST00000551641 TCHHQ07283 1943 aa9.62□□□□□ -0.87
RAB3IP-215ENST00000551641 ARFGEF2Q9Y6D5 1785 aa9.62□□□□□ -0.87
RAB3IP-215ENST00000551641 TAF5LO75529 589 aa9.61□□□□□ -0.87
RAB3IP-215ENST00000551641 DNM1Q05193 864 aaKnown RBP9.61□□□□□ -0.87
RAB3IP-215ENST00000551641 COL9A3Q14050 684 aaPredicted RBP9.61□□□□□ -0.87
RAB3IP-215ENST00000551641 ZNF589Q86UQ0 364 aaPredicted RBP9.61□□□□□ -0.87
RAB3IP-215ENST00000551641 SLC51AQ86UW1 340 aa9.61□□□□□ -0.87
RAB3IP-215ENST00000551641 PUS3Q9BZE2 481 aaKnown RBP9.61□□□□□ -0.87
RAB3IP-215ENST00000551641 DBNLQ9UJU6 430 aaKnown RBP9.61□□□□□ -0.87
RAB3IP-215ENST00000551641 ELP1O95163 1332 aa9.61□□□□□ -0.87
RAB3IP-215ENST00000551641 FIBPO43427 364 aa9.61□□□□□ -0.87
RAB3IP-215ENST00000551641 SERPINB2P05120 415 aa9.61□□□□□ -0.87
RAB3IP-215ENST00000551641 PCCAP05165 728 aaPredicted RBP9.61□□□□□ -0.87
RAB3IP-215ENST00000551641 TOB2Q14106 344 aaPredicted RBP9.61□□□□□ -0.87
RAB3IP-215ENST00000551641 CCDC57Q2TAC2 916 aa9.61□□□□□ -0.87
RAB3IP-215ENST00000551641 TNNI3KQ59H18 835 aa9.61□□□□□ -0.87
RAB3IP-215ENST00000551641 BLOC1S2Q6QNY1 142 aa9.61□□□□□ -0.87
RAB3IP-215ENST00000551641 CNBD1Q8NA66 436 aa9.61□□□□□ -0.87
RAB3IP-215ENST00000551641 FPGT-TNNI3KV9GXZ4 949 aa9.61□□□□□ -0.87
RAB3IP-215ENST00000551641 AFDNP55196 1824 aaKnown RBP9.61□□□□□ -0.87
RAB3IP-215ENST00000551641 RRP9O43818 475 aaKnown RBP9.6□□□□□ -0.87
RAB3IP-215ENST00000551641 PDCP20941 246 aa9.6□□□□□ -0.87
RAB3IP-215ENST00000551641 KCNJ4P48050 445 aa9.6□□□□□ -0.87
RAB3IP-215ENST00000551641 FOXO4P98177 505 aa9.6□□□□□ -0.87
RAB3IP-215ENST00000551641 TPTE2Q6XPS3 522 aa9.6□□□□□ -0.87
RAB3IP-215ENST00000551641 TICAM2Q86XR7 235 aa9.6□□□□□ -0.87
RAB3IP-215ENST00000551641 NECAB1Q8N987 351 aa9.6□□□□□ -0.87
RAB3IP-215ENST00000551641 SNAP23O00161 211 aa9.6□□□□□ -0.87
RAB3IP-215ENST00000551641 NTSR2O95665 410 aa9.6□□□□□ -0.87
RAB3IP-215ENST00000551641 ITGA6P23229 1130 aa9.6□□□□□ -0.87
RAB3IP-215ENST00000551641 DDR1Q08345 913 aa9.6□□□□□ -0.87
RAB3IP-215ENST00000551641 TAF6LQ9Y6J9 622 aa9.6□□□□□ -0.87
RAB3IP-215ENST00000551641 IFIT5Q13325 482 aaKnown RBP9.6□□□□□ -0.87
RAB3IP-215ENST00000551641 KRT32Q14532 448 aa9.6□□□□□ -0.87
RAB3IP-215ENST00000551641 LRRC24Q50LG9 513 aa9.6□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms