RNA–Protein interactions for RNA: ENST00000550146.5

TMEM106C-213, Transcript of transmembrane protein 106C, humanhuman

TSL 3

Gene TMEM106C, Length 663 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM106C-213ENST00000550146 RSBN1LQ6PCB5 846 aaPredicted RBP8.04□□□□□ -1.12
TMEM106C-213ENST00000550146 USP17L1Q7RTZ2 530 aa8.04□□□□□ -1.12
TMEM106C-213ENST00000550146 MICALL2Q8IY33 904 aa8.04□□□□□ -1.12
TMEM106C-213ENST00000550146 HELBQ8NG08 1087 aaPredicted RBP8.04□□□□□ -1.12
TMEM106C-213ENST00000550146 FBXW7Q969H0 707 aa8.04□□□□□ -1.12
TMEM106C-213ENST00000550146 COA1Q9GZY4 146 aa8.04□□□□□ -1.12
TMEM106C-213ENST00000550146 MROH5Q6ZUA9 1318 aa8.03□□□□□ -1.12
TMEM106C-213ENST00000550146 TRPM7Q96QT4 1865 aa8.03□□□□□ -1.12
TMEM106C-213ENST00000550146 ITGBL1O95965 494 aaPredicted RBP8.03□□□□□ -1.12
TMEM106C-213ENST00000550146 VIL1P09327 827 aaKnown RBP8.03□□□□□ -1.12
TMEM106C-213ENST00000550146 HTRA3P83110 453 aa8.03□□□□□ -1.12
TMEM106C-213ENST00000550146 RBM26Q5T8P6 1007 aaKnown RBP8.03□□□□□ -1.12
TMEM106C-213ENST00000550146 INTS3Q68E01 1043 aaKnown RBP8.03□□□□□ -1.12
TMEM106C-213ENST00000550146 ATF7IPQ6VMQ6 1270 aa8.03□□□□□ -1.12
TMEM106C-213ENST00000550146 ZNF804AQ7Z570 1209 aa8.03□□□□□ -1.12
TMEM106C-213ENST00000550146 ANKRD44Q8N8A2 993 aa8.03□□□□□ -1.12
TMEM106C-213ENST00000550146 AGBL3Q8NEM8 1001 aa8.03□□□□□ -1.12
TMEM106C-213ENST00000550146 ZC3H15Q8WU90 426 aaKnown RBP8.03□□□□□ -1.12
TMEM106C-213ENST00000550146 MYO3BQ8WXR4 1341 aa8.03□□□□□ -1.12
TMEM106C-213ENST00000550146 TMEM88BA6NKF7 163 aa8.02□□□□□ -1.13
TMEM106C-213ENST00000550146 GNAI3P08754 354 aa8.02□□□□□ -1.13
TMEM106C-213ENST00000550146 USP17L8P0C7I0 530 aa8.02□□□□□ -1.13
TMEM106C-213ENST00000550146 TBC1D10BQ4KMP7 808 aaPredicted RBP8.02□□□□□ -1.13
TMEM106C-213ENST00000550146 METTL24Q5JXM2 366 aa8.02□□□□□ -1.13
TMEM106C-213ENST00000550146 STRIP1Q5VSL9 837 aa8.02□□□□□ -1.13
TMEM106C-213ENST00000550146 ZKSCAN2Q63HK3 967 aa8.02□□□□□ -1.13
TMEM106C-213ENST00000550146 SAMD7Q7Z3H4 446 aa8.02□□□□□ -1.13
TMEM106C-213ENST00000550146 TXNRD3Q86VQ6 643 aa8.02□□□□□ -1.13
TMEM106C-213ENST00000550146 OGFOD1Q8N543 542 aa8.02□□□□□ -1.13
TMEM106C-213ENST00000550146 DNAJC5GQ8N7S2 189 aa8.02□□□□□ -1.13
TMEM106C-213ENST00000550146 CLUAP1Q96AJ1 413 aa8.02□□□□□ -1.13
TMEM106C-213ENST00000550146 PUS3Q9BZE2 481 aaKnown RBP8.02□□□□□ -1.13
TMEM106C-213ENST00000550146 CREBZFQ9NS37 354 aa8.02□□□□□ -1.13
TMEM106C-213ENST00000550146 PASKQ96RG2 1323 aa8.02□□□□□ -1.13
TMEM106C-213ENST00000550146 SHTN1A0MZ66 631 aa8.01□□□□□ -1.13
TMEM106C-213ENST00000550146 SNAP23O00161 211 aa8.01□□□□□ -1.13
TMEM106C-213ENST00000550146 TRIM27P14373 513 aa8.01□□□□□ -1.13
TMEM106C-213ENST00000550146 KLRK1P26718 216 aa8.01□□□□□ -1.13
TMEM106C-213ENST00000550146 DSG3P32926 999 aa8.01□□□□□ -1.13
TMEM106C-213ENST00000550146 HIRAP54198 1017 aaPredicted RBP8.01□□□□□ -1.13
TMEM106C-213ENST00000550146 GTF2IP78347 998 aa8.01□□□□□ -1.13
TMEM106C-213ENST00000550146 UBE4AQ14139 1066 aa8.01□□□□□ -1.13
TMEM106C-213ENST00000550146 KIF4BQ2VIQ3 1234 aa8.01□□□□□ -1.13
TMEM106C-213ENST00000550146 DACT2Q5SW24 774 aa8.01□□□□□ -1.13
TMEM106C-213ENST00000550146 TTLL5Q6EMB2 1281 aa8.01□□□□□ -1.13
TMEM106C-213ENST00000550146 C15orf52Q6ZUT6 534 aaKnown RBP8.01□□□□□ -1.13
TMEM106C-213ENST00000550146 CDC37L1Q7L3B6 337 aa8.01□□□□□ -1.13
TMEM106C-213ENST00000550146 FTSJ3Q8IY81 847 aaKnown RBP8.01□□□□□ -1.13
TMEM106C-213ENST00000550146 KLHDC4Q8TBB5 520 aa8.01□□□□□ -1.13
TMEM106C-213ENST00000550146 TRPM4Q8TD43 1214 aa8.01□□□□□ -1.13
TMEM106C-213ENST00000550146 DCPSQ96C86 337 aaKnown RBP8.01□□□□□ -1.13
TMEM106C-213ENST00000550146 KLRG1Q96E93 195 aa8.01□□□□□ -1.13
TMEM106C-213ENST00000550146 CD209Q9NNX6 404 aa8.01□□□□□ -1.13
TMEM106C-213ENST00000550146 PGAP2Q9UHJ9 254 aa8.01□□□□□ -1.13
TMEM106C-213ENST00000550146 RIPOR2Q9Y4F9 1068 aa8.01□□□□□ -1.13
TMEM106C-213ENST00000550146 LRRFIP2Q9Y608 721 aaKnown RBP8.01□□□□□ -1.13
TMEM106C-213ENST00000550146 EYA2O00167 538 aa8□□□□□ -1.13
TMEM106C-213ENST00000550146 PDE8BO95263 885 aa8□□□□□ -1.13
TMEM106C-213ENST00000550146 HIBADHP31937 336 aaKnown RBP8□□□□□ -1.13
TMEM106C-213ENST00000550146 MMP14P50281 582 aa8□□□□□ -1.13
TMEM106C-213ENST00000550146 ZNF280AP59817 542 aaPredicted RBP8□□□□□ -1.13
TMEM106C-213ENST00000550146 LRRC24Q50LG9 513 aa8□□□□□ -1.13
TMEM106C-213ENST00000550146 CAVIN4Q5BKX8 364 aa8□□□□□ -1.13
TMEM106C-213ENST00000550146 VPS37DQ86XT2 251 aa8□□□□□ -1.13
TMEM106C-213ENST00000550146 GMLQ99445 158 aa8□□□□□ -1.13
TMEM106C-213ENST00000550146 MEIS3Q99687 375 aa8□□□□□ -1.13
TMEM106C-213ENST00000550146 GLIS2Q9BZE0 524 aaPredicted RBP8□□□□□ -1.13
TMEM106C-213ENST00000550146 MYOZ2Q9NPC6 264 aa8□□□□□ -1.13
TMEM106C-213ENST00000550146 HDAC9Q9UKV0 1011 aa8□□□□□ -1.13
TMEM106C-213ENST00000550146 ABT1Q9ULW3 272 aaKnown RBP8□□□□□ -1.13
TMEM106C-213ENST00000550146 ZNF609O15014 1411 aa8□□□□□ -1.13
TMEM106C-213ENST00000550146 TRAF5O00463 557 aa7.99□□□□□ -1.13
TMEM106C-213ENST00000550146 FRAT2O75474 233 aaPredicted RBP7.99□□□□□ -1.13
TMEM106C-213ENST00000550146 CAPN15O75808 1086 aa7.99□□□□□ -1.13
TMEM106C-213ENST00000550146 EGFRP00533 1210 aa7.99□□□□□ -1.13
TMEM106C-213ENST00000550146 GNAI2P04899 355 aa7.99□□□□□ -1.13
TMEM106C-213ENST00000550146 MS4A1P11836 297 aa7.99□□□□□ -1.13
TMEM106C-213ENST00000550146 IL1R1P14778 569 aa7.99□□□□□ -1.13
TMEM106C-213ENST00000550146 GYG1P46976 350 aa7.99□□□□□ -1.13
TMEM106C-213ENST00000550146 PTPN12Q05209 780 aaKnown RBP7.99□□□□□ -1.13
TMEM106C-213ENST00000550146 SCARF1Q14162 830 aa7.99□□□□□ -1.13
TMEM106C-213ENST00000550146 PUM3Q15397 648 aaKnown RBP7.99□□□□□ -1.13
TMEM106C-213ENST00000550146 USP48Q86UV5 1035 aa7.99□□□□□ -1.13
TMEM106C-213ENST00000550146 SULF1Q8IWU6 871 aa7.99□□□□□ -1.13
TMEM106C-213ENST00000550146 DZIP1LQ8IYY4 767 aaKnown RBP7.99□□□□□ -1.13
TMEM106C-213ENST00000550146 TMEM57Q8N5G2 664 aa7.99□□□□□ -1.13
TMEM106C-213ENST00000550146 MXD3Q9BW11 206 aa7.99□□□□□ -1.13
TMEM106C-213ENST00000550146 SIL1Q9H173 461 aa7.99□□□□□ -1.13
TMEM106C-213ENST00000550146 MKRN1Q9UHC7 482 aaKnown RBP7.99□□□□□ -1.13
TMEM106C-213ENST00000550146 FBXO3Q9UK99 471 aa7.99□□□□□ -1.13
TMEM106C-213ENST00000550146 TNNQ9UQP3 1299 aa7.99□□□□□ -1.13
TMEM106C-213ENST00000550146 IRS2Q9Y4H2 1338 aa7.99□□□□□ -1.13
TMEM106C-213ENST00000550146 SRGAP3O43295 1099 aa7.98□□□□□ -1.13
TMEM106C-213ENST00000550146 CIAO1O76071 339 aa7.98□□□□□ -1.13
TMEM106C-213ENST00000550146 SASH1O94885 1247 aa7.98□□□□□ -1.13
TMEM106C-213ENST00000550146 CELF2O95319 508 aaKnown RBP7.98□□□□□ -1.13
TMEM106C-213ENST00000550146 IFIT1P09914 478 aaKnown RBP7.98□□□□□ -1.13
TMEM106C-213ENST00000550146 IL15P40933 162 aaPredicted RBP7.98□□□□□ -1.13
TMEM106C-213ENST00000550146 RFX5P48382 616 aaPredicted RBP7.98□□□□□ -1.13
TMEM106C-213ENST00000550146 FMR1Q06787 632 aaKnown RBP eCLIP7.98□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 54.2 ms