RNA–Protein interactions for RNA: ENST00000549417.5

LIN7A-202, Transcript of lin-7 homolog A, crumbs cell polarity complex component, humanhuman

TSL 1 (best)

Gene LIN7A, Length 905 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN7A-202ENST00000549417 AMER1Q5JTC6 1135 aaPredicted RBP9.06□□□□□ -0.96
LIN7A-202ENST00000549417 LDLRAD1Q5T700 205 aa9.06□□□□□ -0.96
LIN7A-202ENST00000549417 AGBL3Q8NEM8 1001 aa9.06□□□□□ -0.96
LIN7A-202ENST00000549417 WNK4Q96J92 1243 aa9.06□□□□□ -0.96
LIN7A-202ENST00000549417 MXD3Q9BW11 206 aa9.06□□□□□ -0.96
LIN7A-202ENST00000549417 ZC3H12CQ9C0D7 883 aaKnown RBP9.06□□□□□ -0.96
LIN7A-202ENST00000549417 STAP2Q9UGK3 403 aa9.06□□□□□ -0.96
LIN7A-202ENST00000549417 TRMT112Q9UI30 125 aaKnown RBP9.06□□□□□ -0.96
LIN7A-202ENST00000549417 ZBTB7BO15156 539 aaPredicted RBP9.05□□□□□ -0.96
LIN7A-202ENST00000549417 UFL1O94874 794 aa9.05□□□□□ -0.96
LIN7A-202ENST00000549417 SASH1O94885 1247 aa9.05□□□□□ -0.96
LIN7A-202ENST00000549417 ANXA1P04083 346 aa9.05□□□□□ -0.96
LIN7A-202ENST00000549417 INHBEP58166 350 aa9.05□□□□□ -0.96
LIN7A-202ENST00000549417 MTFR1Q15390 333 aa9.05□□□□□ -0.96
LIN7A-202ENST00000549417 CC2D1BQ5T0F9 858 aaKnown RBP9.05□□□□□ -0.96
LIN7A-202ENST00000549417 TMC4Q7Z404 712 aa9.05□□□□□ -0.96
LIN7A-202ENST00000549417 PHF6Q8IWS0 365 aaKnown RBP eCLIP9.05□□□□□ -0.96
LIN7A-202ENST00000549417 GMLQ99445 158 aa9.05□□□□□ -0.96
LIN7A-202ENST00000549417 PTPN18Q99952 460 aa9.05□□□□□ -0.96
LIN7A-202ENST00000549417 COL3A1P02461 1466 aaPredicted RBP9.04□□□□□ -0.96
LIN7A-202ENST00000549417 WNT10BO00744 389 aa9.04□□□□□ -0.96
LIN7A-202ENST00000549417 GJA5P36382 358 aa9.04□□□□□ -0.96
LIN7A-202ENST00000549417 TAF7Q15545 349 aaPredicted RBP9.04□□□□□ -0.96
LIN7A-202ENST00000549417 NLRP10Q86W26 655 aa9.04□□□□□ -0.96
LIN7A-202ENST00000549417 FBXW7Q969H0 707 aa9.04□□□□□ -0.96
LIN7A-202ENST00000549417 ARHGAP39Q9C0H5 1083 aa9.04□□□□□ -0.96
LIN7A-202ENST00000549417 PRDM6Q9NQX0 595 aa9.04□□□□□ -0.96
LIN7A-202ENST00000549417 RAPGEFL1Q9UHV5 662 aa9.04□□□□□ -0.96
LIN7A-202ENST00000549417 STXBP5LQ9Y2K9 1186 aa9.04□□□□□ -0.96
LIN7A-202ENST00000549417 NR2E3Q9Y5X4 410 aa9.04□□□□□ -0.96
LIN7A-202ENST00000549417 SH3TC1Q8TE82 1336 aa9.04□□□□□ -0.96
LIN7A-202ENST00000549417 PSME4Q14997 1843 aa9.03□□□□□ -0.96
LIN7A-202ENST00000549417 ZBTB48P10074 688 aaPredicted RBP9.03□□□□□ -0.96
LIN7A-202ENST00000549417 MKRN4PQ13434 485 aaPredicted RBP9.03□□□□□ -0.96
LIN7A-202ENST00000549417 PROSER3Q2NL68 480 aa9.03□□□□□ -0.96
LIN7A-202ENST00000549417 RTL5Q5HYW3 569 aaPredicted RBP9.03□□□□□ -0.96
LIN7A-202ENST00000549417 OTUD7BQ6GQQ9 843 aa9.03□□□□□ -0.96
LIN7A-202ENST00000549417 HTATIP2Q9BUP3 242 aa9.03□□□□□ -0.96
LIN7A-202ENST00000549417 RSPH6AQ9H0K4 717 aa9.03□□□□□ -0.96
LIN7A-202ENST00000549417 ANKIB1Q9P2G1 1089 aa9.03□□□□□ -0.96
LIN7A-202ENST00000549417 A0A1W2PPC1 479 aa9.02□□□□□ -0.97
LIN7A-202ENST00000549417 USP17L3A6NCW0 530 aa9.02□□□□□ -0.97
LIN7A-202ENST00000549417 USP17L4A6NCW7 530 aa9.02□□□□□ -0.97
LIN7A-202ENST00000549417 PITPNM1O00562 1244 aa9.02□□□□□ -0.97
LIN7A-202ENST00000549417 AIMP1Q12904 312 aaKnown RBP9.02□□□□□ -0.97
LIN7A-202ENST00000549417 USP17L1Q7RTZ2 530 aa9.02□□□□□ -0.97
LIN7A-202ENST00000549417 MTMR10Q9NXD2 777 aa9.02□□□□□ -0.97
LIN7A-202ENST00000549417 EVI5O60447 810 aa9.01□□□□□ -0.97
LIN7A-202ENST00000549417 EIF2S2P20042 333 aaKnown RBP9.01□□□□□ -0.97
LIN7A-202ENST00000549417 COL9A1P20849 921 aa9.01□□□□□ -0.97
LIN7A-202ENST00000549417 EIF4A1P60842 406 aaKnown RBP9.01□□□□□ -0.97
LIN7A-202ENST00000549417 ANKRD13DQ6ZTN6 518 aa9.01□□□□□ -0.97
LIN7A-202ENST00000549417 FAM89AQ96GI7 184 aa9.01□□□□□ -0.97
LIN7A-202ENST00000549417 GGA1Q9UJY5 639 aa9.01□□□□□ -0.97
LIN7A-202ENST00000549417 MUC3AQ02505 3323 aa9□□□□□ -0.97
LIN7A-202ENST00000549417 SSC5DA1L4H1 1573 aa9□□□□□ -0.97
LIN7A-202ENST00000549417 LAMB1P07942 1786 aa9□□□□□ -0.97
LIN7A-202ENST00000549417 RPS8P62241 208 aaKnown RBP9□□□□□ -0.97
LIN7A-202ENST00000549417 ARHGEF6Q15052 776 aa9□□□□□ -0.97
LIN7A-202ENST00000549417 TAF1CQ15572 869 aaPredicted RBP9□□□□□ -0.97
LIN7A-202ENST00000549417 LRP10Q7Z4F1 713 aa9□□□□□ -0.97
LIN7A-202ENST00000549417 UBE2Q1Q7Z7E8 422 aa9□□□□□ -0.97
LIN7A-202ENST00000549417 APOBEC3FQ8IUX4 373 aaKnown RBP9□□□□□ -0.97
LIN7A-202ENST00000549417 OGFOD1Q8N543 542 aa9□□□□□ -0.97
LIN7A-202ENST00000549417 NECTIN2Q92692 538 aa9□□□□□ -0.97
LIN7A-202ENST00000549417 ZNF646O15015 1829 aaPredicted RBP8.99□□□□□ -0.97
LIN7A-202ENST00000549417 FARP2O94887 1054 aaPredicted RBP8.99□□□□□ -0.97
LIN7A-202ENST00000549417 HSPA5P11021 654 aaKnown RBP8.99□□□□□ -0.97
LIN7A-202ENST00000549417 PDIA6Q15084 440 aa8.99□□□□□ -0.97
LIN7A-202ENST00000549417 COPS6Q7L5N1 327 aa8.99□□□□□ -0.97
LIN7A-202ENST00000549417 XAGE3Q8WTP9 111 aa8.99□□□□□ -0.97
LIN7A-202ENST00000549417 DEFB129Q9H1M3 183 aa8.99□□□□□ -0.97
LIN7A-202ENST00000549417 ELP3Q9H9T3 547 aa8.99□□□□□ -0.97
LIN7A-202ENST00000549417 SEC31BQ9NQW1 1179 aa8.99□□□□□ -0.97
LIN7A-202ENST00000549417 PODXL2Q9NZ53 605 aa8.99□□□□□ -0.97
LIN7A-202ENST00000549417 ERBB4Q15303 1308 aa8.99□□□□□ -0.97
LIN7A-202ENST00000549417 PPP1R12BO60237 982 aaPredicted RBP8.98□□□□□ -0.97
LIN7A-202ENST00000549417 CCL5P13501 91 aa8.98□□□□□ -0.97
LIN7A-202ENST00000549417 GJA8P48165 433 aa8.98□□□□□ -0.97
LIN7A-202ENST00000549417 BCAMP50895 628 aa8.98□□□□□ -0.97
LIN7A-202ENST00000549417 SF3B3Q15393 1217 aaKnown RBP8.98□□□□□ -0.97
LIN7A-202ENST00000549417 MAP3K11Q16584 847 aa8.98□□□□□ -0.97
LIN7A-202ENST00000549417 HSP90AB3PQ58FF7 597 aa8.98□□□□□ -0.97
LIN7A-202ENST00000549417 DACT2Q5SW24 774 aa8.98□□□□□ -0.97
LIN7A-202ENST00000549417 PIP4P2Q8N4L2 257 aa8.98□□□□□ -0.97
LIN7A-202ENST00000549417 NKX2-3Q8TAU0 364 aa8.98□□□□□ -0.97
LIN7A-202ENST00000549417 BRI3BPQ8WY22 251 aa8.98□□□□□ -0.97
LIN7A-202ENST00000549417 OPTNQ96CV9 577 aa8.98□□□□□ -0.97
LIN7A-202ENST00000549417 RNF208Q9H0X6 261 aa8.98□□□□□ -0.97
LIN7A-202ENST00000549417 ZFYVE28Q9HCC9 887 aa8.98□□□□□ -0.97
LIN7A-202ENST00000549417 BIN2Q9UBW5 565 aaPredicted RBP8.98□□□□□ -0.97
LIN7A-202ENST00000549417 CCL15-CCL14A0A0B4J2E2 113 aa8.97□□□□□ -0.97
LIN7A-202ENST00000549417 TESPA1A2RU30 521 aaPredicted RBP8.97□□□□□ -0.97
LIN7A-202ENST00000549417 ATP5J2-PTCD1G3V325 749 aa8.97□□□□□ -0.97
LIN7A-202ENST00000549417 U2AF1L5P0DN76 240 aaPredicted RBP8.97□□□□□ -0.97
LIN7A-202ENST00000549417 U2AF1Q01081 240 aaKnown RBP eCLIP8.97□□□□□ -0.97
LIN7A-202ENST00000549417 KIF22Q14807 665 aa8.97□□□□□ -0.97
LIN7A-202ENST00000549417 CCL15Q16663 113 aa8.97□□□□□ -0.97
LIN7A-202ENST00000549417 GPR153Q6NV75 609 aa8.97□□□□□ -0.97
LIN7A-202ENST00000549417 KIAA0825Q8IV33 1275 aa8.97□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 61.2 ms