RNA–Protein interactions for RNA: ENST00000548126.1

CCDC59-203, Transcript of coiled-coil domain containing 59, humanhuman

TSL 2

Gene CCDC59, Length 984 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC59-203ENST00000548126 TMEM132EQ6IEE7 984 aa10.11□□□□□ -0.79
CCDC59-203ENST00000548126 RUBCNLQ9H714 662 aa10.11□□□□□ -0.79
CCDC59-203ENST00000548126 DOLKQ9UPQ8 538 aa10.11□□□□□ -0.79
CCDC59-203ENST00000548126 THRAP3Q9Y2W1 955 aaKnown RBP10.11□□□□□ -0.79
CCDC59-203ENST00000548126 GPRASP1Q5JY77 1395 aa10.11□□□□□ -0.79
CCDC59-203ENST00000548126 KIAA0232Q92628 1395 aa10.11□□□□□ -0.79
CCDC59-203ENST00000548126 PPLO60437 1756 aa10.11□□□□□ -0.79
CCDC59-203ENST00000548126 SHISA8B8ZZ34 492 aa10.1□□□□□ -0.79
CCDC59-203ENST00000548126 ITGB2P05107 769 aa10.1□□□□□ -0.79
CCDC59-203ENST00000548126 SLFNL1Q499Z3 407 aa10.1□□□□□ -0.79
CCDC59-203ENST00000548126 COL13A1Q5TAT6 717 aaPredicted RBP10.1□□□□□ -0.79
CCDC59-203ENST00000548126 SLCO4C1Q6ZQN7 724 aa10.1□□□□□ -0.79
CCDC59-203ENST00000548126 CCDC85AQ96PX6 553 aaPredicted RBP10.1□□□□□ -0.79
CCDC59-203ENST00000548126 GRIN3BO60391 1043 aa10.09□□□□□ -0.79
CCDC59-203ENST00000548126 FGFR3P22607 806 aa10.09□□□□□ -0.79
CCDC59-203ENST00000548126 ZC3H6P61129 1189 aaKnown RBP10.09□□□□□ -0.79
CCDC59-203ENST00000548126 TLR1Q15399 786 aa10.09□□□□□ -0.79
CCDC59-203ENST00000548126 TXNRD1Q16881 649 aa10.09□□□□□ -0.79
CCDC59-203ENST00000548126 LARP1Q6PKG0 1096 aaKnown RBP10.09□□□□□ -0.79
CCDC59-203ENST00000548126 TBC1D9Q6ZT07 1266 aa10.09□□□□□ -0.79
CCDC59-203ENST00000548126 PTF1AQ7RTS3 328 aa10.09□□□□□ -0.79
CCDC59-203ENST00000548126 PPARGC1BQ86YN6 1023 aaKnown RBP10.09□□□□□ -0.79
CCDC59-203ENST00000548126 DNAJC5GQ8N7S2 189 aa10.09□□□□□ -0.79
CCDC59-203ENST00000548126 CRYBG1Q9Y4K1 1723 aa10.09□□□□□ -0.79
CCDC59-203ENST00000548126 ADGRF5Q8IZF2 1346 aa10.08□□□□□ -0.8
CCDC59-203ENST00000548126 OVOS2A0A0G2JMS6 1433 aa10.08□□□□□ -0.8
CCDC59-203ENST00000548126 OVOS2A0A0J9YW53 1432 aa10.08□□□□□ -0.8
CCDC59-203ENST00000548126 OVOS2Q6IE36 1432 aa10.08□□□□□ -0.8
CCDC59-203ENST00000548126 SSH2Q76I76 1423 aa10.08□□□□□ -0.8
CCDC59-203ENST00000548126 ATP10DQ9P241 1426 aa10.08□□□□□ -0.8
CCDC59-203ENST00000548126 KNDC1Q76NI1 1749 aa10.08□□□□□ -0.8
CCDC59-203ENST00000548126 PCNTO95613 3336 aa10.08□□□□□ -0.8
CCDC59-203ENST00000548126 THBS1P07996 1170 aa10.08□□□□□ -0.8
CCDC59-203ENST00000548126 C1orf216Q8TAB5 229 aa10.08□□□□□ -0.8
CCDC59-203ENST00000548126 CDCA7Q9BWT1 371 aaPredicted RBP10.08□□□□□ -0.8
CCDC59-203ENST00000548126 CRISPLD1Q9H336 500 aa10.08□□□□□ -0.8
CCDC59-203ENST00000548126 PEAK1Q9H792 1746 aa10.07□□□□□ -0.8
CCDC59-203ENST00000548126 KRBA1A5PL33 1030 aa10.07□□□□□ -0.8
CCDC59-203ENST00000548126 GNB5O14775 395 aa10.07□□□□□ -0.8
CCDC59-203ENST00000548126 GPR37L1O60883 481 aa10.07□□□□□ -0.8
CCDC59-203ENST00000548126 GRIN2CQ14957 1233 aa10.07□□□□□ -0.8
CCDC59-203ENST00000548126 ABHD17AQ96GS6 310 aa10.07□□□□□ -0.8
CCDC59-203ENST00000548126 NOP53Q9NZM5 478 aaKnown RBP10.07□□□□□ -0.8
CCDC59-203ENST00000548126 PARP4Q9UKK3 1724 aaKnown RBP10.07□□□□□ -0.8
CCDC59-203ENST00000548126 YTHDC2Q9H6S0 1430 aaKnown RBP10.07□□□□□ -0.8
CCDC59-203ENST00000548126 ACIN1Q9UKV3 1341 aaKnown RBP10.07□□□□□ -0.8
CCDC59-203ENST00000548126 UBAP2LQ14157 1087 aaKnown RBP10.06□□□□□ -0.8
CCDC59-203ENST00000548126 RNF135Q8IUD6 432 aa10.06□□□□□ -0.8
CCDC59-203ENST00000548126 TNS4Q8IZW8 715 aa10.06□□□□□ -0.8
CCDC59-203ENST00000548126 GGA1Q9UJY5 639 aa10.06□□□□□ -0.8
CCDC59-203ENST00000548126 ANKARQ7Z5J8 1434 aa10.06□□□□□ -0.8
CCDC59-203ENST00000548126 DHX57Q6P158 1386 aaKnown RBP10.05□□□□□ -0.8
CCDC59-203ENST00000548126 ARAFP10398 606 aa10.05□□□□□ -0.8
CCDC59-203ENST00000548126 C1orf229Q6ZS94 237 aaPredicted RBP10.05□□□□□ -0.8
CCDC59-203ENST00000548126 SNRKQ9NRH2 765 aa10.05□□□□□ -0.8
CCDC59-203ENST00000548126 YBX3P16989 372 aaKnown RBP eCLIP10.04□□□□□ -0.8
CCDC59-203ENST00000548126 SAFB2Q14151 953 aaKnown RBP eCLIP10.04□□□□□ -0.8
CCDC59-203ENST00000548126 DDB1Q16531 1140 aa10.04□□□□□ -0.8
CCDC59-203ENST00000548126 NLRP8Q86W28 1048 aa10.04□□□□□ -0.8
CCDC59-203ENST00000548126 NGDNQ8NEJ9 315 aaKnown RBP10.04□□□□□ -0.8
CCDC59-203ENST00000548126 ETNK1Q9HBU6 452 aa10.04□□□□□ -0.8
CCDC59-203ENST00000548126 PCDHGC4Q9Y5F7 938 aa10.04□□□□□ -0.8
CCDC59-203ENST00000548126 ATP7BP35670 1465 aa10.04□□□□□ -0.8
CCDC59-203ENST00000548126 BNIP3LO60238 219 aa10.03□□□□□ -0.8
CCDC59-203ENST00000548126 EPXP11678 715 aa10.03□□□□□ -0.8
CCDC59-203ENST00000548126 POLD1P28340 1107 aa10.03□□□□□ -0.8
CCDC59-203ENST00000548126 PLA2G4AP47712 749 aa10.03□□□□□ -0.8
CCDC59-203ENST00000548126 XP32Q5T750 250 aa10.03□□□□□ -0.8
CCDC59-203ENST00000548126 NLGN2Q8NFZ4 835 aa10.03□□□□□ -0.8
CCDC59-203ENST00000548126 ZNF526Q8TF50 670 aaPredicted RBP10.03□□□□□ -0.8
CCDC59-203ENST00000548126 NIFKQ9BYG3 293 aaKnown RBP10.03□□□□□ -0.8
CCDC59-203ENST00000548126 NDFIP2Q9NV92 336 aa10.03□□□□□ -0.8
CCDC59-203ENST00000548126 COL8A1P27658 744 aa10.02□□□□□ -0.81
CCDC59-203ENST00000548126 OXLD1Q5BKU9 147 aa10.02□□□□□ -0.81
CCDC59-203ENST00000548126 BTBD6Q96KE9 485 aa10.02□□□□□ -0.81
CCDC59-203ENST00000548126 PRAM1Q96QH2 718 aa10.02□□□□□ -0.81
CCDC59-203ENST00000548126 AATKQ6ZMQ8 1374 aa10.01□□□□□ -0.81
CCDC59-203ENST00000548126 BCL9O00512 1426 aa10.01□□□□□ -0.81
CCDC59-203ENST00000548126 CTBSQ01459 385 aa10.01□□□□□ -0.81
CCDC59-203ENST00000548126 TMEM132AQ24JP5 1023 aa10.01□□□□□ -0.81
CCDC59-203ENST00000548126 NBPF1Q3BBV0 1214 aa10.01□□□□□ -0.81
CCDC59-203ENST00000548126 LINC00114Q6XXX2 140 aa10.01□□□□□ -0.81
CCDC59-203ENST00000548126 MARCH10Q8NA82 808 aaPredicted RBP10.01□□□□□ -0.81
CCDC59-203ENST00000548126 PHRF1Q9P1Y6 1649 aaKnown RBP10□□□□□ -0.81
CCDC59-203ENST00000548126 LOC105371045A0A1W2PR82 267 aa10□□□□□ -0.81
CCDC59-203ENST00000548126 C2CD2LO14523 706 aa10□□□□□ -0.81
CCDC59-203ENST00000548126 ADH6P28332 368 aa10□□□□□ -0.81
CCDC59-203ENST00000548126 MAP7D1Q3KQU3 841 aa10□□□□□ -0.81
CCDC59-203ENST00000548126 NUTM2GQ5VZR2 741 aa10□□□□□ -0.81
CCDC59-203ENST00000548126 PHTF2Q8N3S3 785 aa10□□□□□ -0.81
CCDC59-203ENST00000548126 AIDAQ96BJ3 306 aa10□□□□□ -0.81
CCDC59-203ENST00000548126 ZCCHC2Q9C0B9 1178 aaKnown RBP10□□□□□ -0.81
CCDC59-203ENST00000548126 AVENQ9NQS1 362 aaPredicted RBP10□□□□□ -0.81
CCDC59-203ENST00000548126 POGKQ9P215 609 aa10□□□□□ -0.81
CCDC59-203ENST00000548126 ADCY9O60503 1353 aa10□□□□□ -0.81
CCDC59-203ENST00000548126 ANKRD30BQ9BXX2 1392 aa10□□□□□ -0.81
CCDC59-203ENST00000548126 ATXN7O15265 892 aaPredicted RBP9.99□□□□□ -0.81
CCDC59-203ENST00000548126 INHAP05111 366 aa9.99□□□□□ -0.81
CCDC59-203ENST00000548126 TATP17735 454 aaPredicted RBP9.99□□□□□ -0.81
CCDC59-203ENST00000548126 ITGAEP38570 1179 aa9.99□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms