RNA–Protein interactions for RNA: ENST00000546407.1

CFTR-207, Transcript of cystic fibrosis transmembrane conductance regulator, humanhuman

TSL 1 (best)

Gene CFTR, Length 222 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CFTR-207ENST00000546407 USP6NLQ92738 828 aa2.29□□□□□ -2.04
CFTR-207ENST00000546407 DDX12PQ92771 950 aa2.29□□□□□ -2.04
CFTR-207ENST00000546407 E2F7Q96AV8 911 aa2.29□□□□□ -2.04
CFTR-207ENST00000546407 SKA1Q96BD8 255 aa2.29□□□□□ -2.04
CFTR-207ENST00000546407 TBC1D20Q96BZ9 403 aa2.29□□□□□ -2.04
CFTR-207ENST00000546407 CFAP36Q96G28 342 aa2.29□□□□□ -2.04
CFTR-207ENST00000546407 TCHPQ9BT92 498 aa2.29□□□□□ -2.04
CFTR-207ENST00000546407 BACH2Q9BYV9 841 aa2.29□□□□□ -2.04
CFTR-207ENST00000546407 PPP1R12CQ9BZL4 782 aa2.29□□□□□ -2.04
CFTR-207ENST00000546407 TRIM8Q9BZR9 551 aa2.29□□□□□ -2.04
CFTR-207ENST00000546407 DDX24Q9GZR7 859 aaKnown RBP eCLIP2.29□□□□□ -2.04
CFTR-207ENST00000546407 PRKRIP1Q9H875 184 aaPredicted RBP2.29□□□□□ -2.04
CFTR-207ENST00000546407 CAPN10Q9HC96 672 aa2.29□□□□□ -2.04
CFTR-207ENST00000546407 GDPD2Q9HCC8 539 aa2.29□□□□□ -2.04
CFTR-207ENST00000546407 ENAMQ9NRM1 1142 aa2.29□□□□□ -2.04
CFTR-207ENST00000546407 METTL5Q9NRN9 209 aaKnown RBP2.29□□□□□ -2.04
CFTR-207ENST00000546407 PDRG1Q9NUG6 133 aa2.29□□□□□ -2.04
CFTR-207ENST00000546407 PSD3Q9NYI0 1048 aa2.29□□□□□ -2.04
CFTR-207ENST00000546407 IL20Q9NYY1 176 aa2.29□□□□□ -2.04
CFTR-207ENST00000546407 SPATA7Q9P0W8 599 aa2.29□□□□□ -2.04
CFTR-207ENST00000546407 ITGB1BP2Q9UKP3 347 aa2.29□□□□□ -2.04
CFTR-207ENST00000546407 INTUQ9ULD6 942 aa2.29□□□□□ -2.04
CFTR-207ENST00000546407 TRAK1Q9UPV9 953 aa2.29□□□□□ -2.04
CFTR-207ENST00000546407 TRAF3IP3Q9Y228 551 aa2.29□□□□□ -2.04
CFTR-207ENST00000546407 LUC7L2Q9Y383 392 aaKnown RBP2.29□□□□□ -2.04
CFTR-207ENST00000546407 MRPL11Q9Y3B7 192 aaKnown RBP2.29□□□□□ -2.04
CFTR-207ENST00000546407 GJA3Q9Y6H8 435 aa2.29□□□□□ -2.04
CFTR-207ENST00000546407 MORC2Q9Y6X9 1032 aaPredicted RBP2.29□□□□□ -2.04
CFTR-207ENST00000546407 DHX29Q7Z478 1369 aaKnown RBP2.28□□□□□ -2.04
CFTR-207ENST00000546407 NINLQ9Y2I6 1382 aa2.28□□□□□ -2.04
CFTR-207ENST00000546407 C2orf81A6NN90 581 aa2.28□□□□□ -2.04
CFTR-207ENST00000546407 TBKBP1A7MCY6 615 aa2.28□□□□□ -2.04
CFTR-207ENST00000546407 PRSS47A8MTI9 375 aa2.28□□□□□ -2.04
CFTR-207ENST00000546407 C9IYK1 514 aa2.28□□□□□ -2.04
CFTR-207ENST00000546407 IQCJ-SCHIP1C9J366 451 aaPredicted RBP2.28□□□□□ -2.04
CFTR-207ENST00000546407 H0Y3Z8 333 aa2.28□□□□□ -2.04
CFTR-207ENST00000546407 BOLA2-SMG1P6H3BVE0 249 aa2.28□□□□□ -2.04
CFTR-207ENST00000546407 M0QX08 132 aa2.28□□□□□ -2.04
CFTR-207ENST00000546407 LILRB3O75022 631 aa2.28□□□□□ -2.04
CFTR-207ENST00000546407 PRPF40AO75400 957 aaKnown RBP2.28□□□□□ -2.04
CFTR-207ENST00000546407 OFD1O75665 1012 aa2.28□□□□□ -2.04
CFTR-207ENST00000546407 SASH1O94885 1247 aa2.28□□□□□ -2.04
CFTR-207ENST00000546407 ECEL1O95672 775 aa2.28□□□□□ -2.04
CFTR-207ENST00000546407 MYBL2P10244 700 aa2.28□□□□□ -2.04
CFTR-207ENST00000546407 ATF7P17544 494 aaPredicted RBP2.28□□□□□ -2.04
CFTR-207ENST00000546407 KCNA6P17658 529 aa2.28□□□□□ -2.04
CFTR-207ENST00000546407 YY1P25490 414 aa2.28□□□□□ -2.04
CFTR-207ENST00000546407 DNAJA1P31689 397 aaKnown RBP2.28□□□□□ -2.04
CFTR-207ENST00000546407 HSPA4P34932 840 aa2.28□□□□□ -2.04
CFTR-207ENST00000546407 PRPHP41219 470 aa2.28□□□□□ -2.04
CFTR-207ENST00000546407 UBA7P41226 1012 aa2.28□□□□□ -2.04
CFTR-207ENST00000546407 PLA2G4AP47712 749 aa2.28□□□□□ -2.04
CFTR-207ENST00000546407 GJA8P48165 433 aa2.28□□□□□ -2.04
CFTR-207ENST00000546407 NASPP49321 788 aaPredicted RBP2.28□□□□□ -2.04
CFTR-207ENST00000546407 CTCFP49711 727 aaPredicted RBP2.28□□□□□ -2.04
CFTR-207ENST00000546407 USP11P51784 963 aa2.28□□□□□ -2.04
CFTR-207ENST00000546407 COPAP53621 1224 aa2.28□□□□□ -2.04
CFTR-207ENST00000546407 EPHB1P54762 984 aa2.28□□□□□ -2.04
CFTR-207ENST00000546407 CSE1LP55060 971 aaKnown RBP2.28□□□□□ -2.04
CFTR-207ENST00000546407 UBASH3AP57075 661 aa2.28□□□□□ -2.04
CFTR-207ENST00000546407 RIPK4P57078 832 aa2.28□□□□□ -2.04
CFTR-207ENST00000546407 GPSM2P81274 684 aa2.28□□□□□ -2.04
CFTR-207ENST00000546407 EXOSC10Q01780 885 aaKnown RBP2.28□□□□□ -2.04
CFTR-207ENST00000546407 ARID5AQ03989 594 aa2.28□□□□□ -2.04
CFTR-207ENST00000546407 ICA1Q05084 483 aa2.28□□□□□ -2.04
CFTR-207ENST00000546407 NSUN2Q08J23 767 aaKnown RBP eCLIP2.28□□□□□ -2.04
CFTR-207ENST00000546407 LRRC74AQ0VAA2 488 aa2.28□□□□□ -2.04
CFTR-207ENST00000546407 CCDC173Q0VFZ6 552 aa2.28□□□□□ -2.04
CFTR-207ENST00000546407 DDX10Q13206 875 aaKnown RBP2.28□□□□□ -2.04
CFTR-207ENST00000546407 TNIP1Q15025 636 aa2.28□□□□□ -2.04
CFTR-207ENST00000546407 PPP2R5BQ15173 497 aa2.28□□□□□ -2.04
CFTR-207ENST00000546407 PUM3Q15397 648 aaKnown RBP2.28□□□□□ -2.04
CFTR-207ENST00000546407 SLC5A9Q2M3M2 681 aa2.28□□□□□ -2.04
CFTR-207ENST00000546407 KIF4BQ2VIQ3 1234 aa2.28□□□□□ -2.04
CFTR-207ENST00000546407 SLC4A8Q2Y0W8 1093 aa2.28□□□□□ -2.04
CFTR-207ENST00000546407 LARP7Q4G0J3 582 aaKnown RBP eCLIP2.28□□□□□ -2.04
CFTR-207ENST00000546407 CCDC152Q4G0S7 254 aa2.28□□□□□ -2.04
CFTR-207ENST00000546407 ARSHQ5FYA8 562 aa2.28□□□□□ -2.04
CFTR-207ENST00000546407 ZC3H12BQ5HYM0 836 aaKnown RBP2.28□□□□□ -2.04
CFTR-207ENST00000546407 SPDYCQ5MJ68 293 aa2.28□□□□□ -2.04
CFTR-207ENST00000546407 MYSM1Q5VVJ2 828 aa2.28□□□□□ -2.04
CFTR-207ENST00000546407 C9orf131Q5VYM1 1079 aa2.28□□□□□ -2.04
CFTR-207ENST00000546407 NUTM2GQ5VZR2 741 aa2.28□□□□□ -2.04
CFTR-207ENST00000546407 FAAH2Q6GMR7 532 aa2.28□□□□□ -2.04
CFTR-207ENST00000546407 PPP4R3AQ6IN85 833 aa2.28□□□□□ -2.04
CFTR-207ENST00000546407 ALKBH2Q6NS38 261 aa2.28□□□□□ -2.04
CFTR-207ENST00000546407 IRGCQ6NXR0 463 aa2.28□□□□□ -2.04
CFTR-207ENST00000546407 ZNF449Q6P9G9 518 aa2.28□□□□□ -2.04
CFTR-207ENST00000546407 ABRAXAS1Q6UWZ7 409 aa2.28□□□□□ -2.04
CFTR-207ENST00000546407 PACS1Q6VY07 963 aa2.28□□□□□ -2.04
CFTR-207ENST00000546407 SEPT14Q6ZU15 432 aa2.28□□□□□ -2.04
CFTR-207ENST00000546407 USP51Q70EK9 711 aa2.28□□□□□ -2.04
CFTR-207ENST00000546407 BEND5Q7L4P6 421 aa2.28□□□□□ -2.04
CFTR-207ENST00000546407 MCM10Q7L590 875 aa2.28□□□□□ -2.04
CFTR-207ENST00000546407 CATSPER4Q7RTX7 472 aa2.28□□□□□ -2.04
CFTR-207ENST00000546407 USP48Q86UV5 1035 aa2.28□□□□□ -2.04
CFTR-207ENST00000546407 DZIP1Q86YF9 867 aaKnown RBP2.28□□□□□ -2.04
CFTR-207ENST00000546407 LURAP1LQ8IV03 231 aa2.28□□□□□ -2.04
CFTR-207ENST00000546407 PEX5LQ8IYB4 626 aa2.28□□□□□ -2.04
CFTR-207ENST00000546407 RNF168Q8IYW5 571 aaPredicted RBP2.28□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms