RNA–Protein interactions for RNA: ENST00000544552.5

PAAF1-214, Transcript of proteasomal ATPase associated factor 1, humanhuman

TSL 1 (best) BASIC

Gene PAAF1, Length 1,612 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAAF1-214ENST00000544552 TMX3Q96JJ7 454 aa15.3■□□□□ 0.04
PAAF1-214ENST00000544552 TTC14Q96N46 770 aa15.3■□□□□ 0.04
PAAF1-214ENST00000544552 NLRP3Q96P20 1036 aa15.3■□□□□ 0.04
PAAF1-214ENST00000544552 ZSWIM6Q9HCJ5 1215 aa15.3■□□□□ 0.04
PAAF1-214ENST00000544552 BSDC1Q9NW68 430 aaPredicted RBP15.3■□□□□ 0.04
PAAF1-214ENST00000544552 U3KPZ7 1027 aaPredicted RBP15.3■□□□□ 0.04
PAAF1-214ENST00000544552 SLC27A2O14975 620 aa15.29■□□□□ 0.04
PAAF1-214ENST00000544552 PSMA5P28066 241 aa15.29■□□□□ 0.04
PAAF1-214ENST00000544552 KCNJ4P48050 445 aa15.29■□□□□ 0.04
PAAF1-214ENST00000544552 SCARF1Q14162 830 aa15.29■□□□□ 0.04
PAAF1-214ENST00000544552 CCDC102BQ68D86 513 aa15.29■□□□□ 0.04
PAAF1-214ENST00000544552 ANKRD18AQ8IVF6 992 aa15.29■□□□□ 0.04
PAAF1-214ENST00000544552 INTS4Q96HW7 963 aaKnown RBP15.29■□□□□ 0.04
PAAF1-214ENST00000544552 UPF3BQ9BZI7 483 aaKnown RBP15.29■□□□□ 0.04
PAAF1-214ENST00000544552 AKAP11Q9UKA4 1901 aa15.29■□□□□ 0.04
PAAF1-214ENST00000544552 ARAP2Q8WZ64 1704 aa15.29■□□□□ 0.04
PAAF1-214ENST00000544552 MCAMP43121 646 aa15.28■□□□□ 0.04
PAAF1-214ENST00000544552 ZAP70P43403 619 aa15.28■□□□□ 0.04
PAAF1-214ENST00000544552 DSCC1Q9BVC3 393 aa15.28■□□□□ 0.04
PAAF1-214ENST00000544552 C4AP0C0L4 1744 aa15.28■□□□□ 0.04
PAAF1-214ENST00000544552 CHRNDQ07001 517 aa15.28■□□□□ 0.04
PAAF1-214ENST00000544552 RAB3GAP1Q15042 981 aa15.28■□□□□ 0.04
PAAF1-214ENST00000544552 VPS53Q5VIR6 699 aa15.28■□□□□ 0.04
PAAF1-214ENST00000544552 C3orf67Q6ZVT6 689 aa15.28■□□□□ 0.04
PAAF1-214ENST00000544552 HELBQ8NG08 1087 aaPredicted RBP15.28■□□□□ 0.04
PAAF1-214ENST00000544552 SEC62Q99442 399 aaKnown RBP15.28■□□□□ 0.04
PAAF1-214ENST00000544552 CARMIL3Q8ND23 1372 aa15.27■□□□□ 0.04
PAAF1-214ENST00000544552 UBR3Q6ZT12 1888 aa15.27■□□□□ 0.04
PAAF1-214ENST00000544552 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP15.27■□□□□ 0.03
PAAF1-214ENST00000544552 FRAT2O75474 233 aaPredicted RBP15.27■□□□□ 0.03
PAAF1-214ENST00000544552 KRT32Q14532 448 aa15.27■□□□□ 0.03
PAAF1-214ENST00000544552 ZSCAN25Q6NSZ9 544 aa15.27■□□□□ 0.03
PAAF1-214ENST00000544552 DDX24Q9GZR7 859 aaKnown RBP eCLIP15.27■□□□□ 0.03
PAAF1-214ENST00000544552 CYP46A1Q9Y6A2 500 aa15.27■□□□□ 0.03
PAAF1-214ENST00000544552 RPAP1Q9BWH6 1393 aaPredicted RBP15.26■□□□□ 0.03
PAAF1-214ENST00000544552 CASTP20810 708 aaKnown RBP15.26■□□□□ 0.03
PAAF1-214ENST00000544552 PHKA1P46020 1223 aa15.26■□□□□ 0.03
PAAF1-214ENST00000544552 UBE4AQ14139 1066 aa15.26■□□□□ 0.03
PAAF1-214ENST00000544552 NFIXQ14938 502 aa15.26■□□□□ 0.03
PAAF1-214ENST00000544552 ADCK5Q3MIX3 580 aa15.26■□□□□ 0.03
PAAF1-214ENST00000544552 RUFY3Q7L099 469 aa15.26■□□□□ 0.03
PAAF1-214ENST00000544552 JAKMIP1Q96N16 626 aaKnown RBP15.26■□□□□ 0.03
PAAF1-214ENST00000544552 ALDH8A1Q9H2A2 487 aaPredicted RBP15.26■□□□□ 0.03
PAAF1-214ENST00000544552 PHF14O94880 888 aa15.25■□□□□ 0.03
PAAF1-214ENST00000544552 CHGBP05060 677 aa15.25■□□□□ 0.03
PAAF1-214ENST00000544552 RPS8P62241 208 aaKnown RBP15.25■□□□□ 0.03
PAAF1-214ENST00000544552 NUCB2P80303 420 aa15.25■□□□□ 0.03
PAAF1-214ENST00000544552 APPBP2Q92624 585 aa15.25■□□□□ 0.03
PAAF1-214ENST00000544552 AKT1S1Q96B36 256 aa15.25■□□□□ 0.03
PAAF1-214ENST00000544552 LIMCH1Q9UPQ0 1083 aa15.25■□□□□ 0.03
PAAF1-214ENST00000544552 MAST3O60307 1309 aa15.25■□□□□ 0.03
PAAF1-214ENST00000544552 CYP2E1P05181 493 aaPredicted RBP15.25■□□□□ 0.03
PAAF1-214ENST00000544552 CCDC129Q6ZRS4 1044 aa15.25■□□□□ 0.03
PAAF1-214ENST00000544552 CLEC17AQ6ZS10 378 aa15.25■□□□□ 0.03
PAAF1-214ENST00000544552 OSBP2Q969R2 916 aa15.25■□□□□ 0.03
PAAF1-214ENST00000544552 FOXD4L1Q9NU39 408 aa15.25■□□□□ 0.03
PAAF1-214ENST00000544552 PDRG1Q9NUG6 133 aa15.25■□□□□ 0.03
PAAF1-214ENST00000544552 STK32BQ9NY57 414 aa15.25■□□□□ 0.03
PAAF1-214ENST00000544552 MINPP1Q9UNW1 487 aa15.25■□□□□ 0.03
PAAF1-214ENST00000544552 HSPD1P10809 573 aaKnown RBP15.24■□□□□ 0.03
PAAF1-214ENST00000544552 GYS1P13807 737 aa15.24■□□□□ 0.03
PAAF1-214ENST00000544552 TM4SF1P30408 202 aa15.24■□□□□ 0.03
PAAF1-214ENST00000544552 ADD2P35612 726 aa15.24■□□□□ 0.03
PAAF1-214ENST00000544552 AK2P54819 239 aa15.24■□□□□ 0.03
PAAF1-214ENST00000544552 UBE3CQ15386 1083 aa15.24■□□□□ 0.03
PAAF1-214ENST00000544552 PI16Q6UXB8 463 aa15.24■□□□□ 0.03
PAAF1-214ENST00000544552 SPATA5Q8NB90 893 aa15.24■□□□□ 0.03
PAAF1-214ENST00000544552 ZSCAN31Q96LW9 406 aaPredicted RBP15.24■□□□□ 0.03
PAAF1-214ENST00000544552 CASZ1Q86V15 1759 aa15.23■□□□□ 0.03
PAAF1-214ENST00000544552 ZBTB22O15209 634 aa15.23■□□□□ 0.03
PAAF1-214ENST00000544552 CELF1Q92879 486 aaKnown RBP15.23■□□□□ 0.03
PAAF1-214ENST00000544552 TFCP2L1Q9NZI6 479 aa15.23■□□□□ 0.03
PAAF1-214ENST00000544552 MYH7P12883 1935 aa15.23■□□□□ 0.03
PAAF1-214ENST00000544552 MCM4P33991 863 aa15.22■□□□□ 0.03
PAAF1-214ENST00000544552 RASGRF1Q13972 1273 aa15.22■□□□□ 0.03
PAAF1-214ENST00000544552 ANKRD1Q15327 319 aa15.22■□□□□ 0.03
PAAF1-214ENST00000544552 SLC15A2Q16348 729 aa15.22■□□□□ 0.03
PAAF1-214ENST00000544552 ZNF827Q17R98 1081 aa15.22■□□□□ 0.03
PAAF1-214ENST00000544552 SLFNL1Q499Z3 407 aa15.22■□□□□ 0.03
PAAF1-214ENST00000544552 BLOC1S2Q6QNY1 142 aa15.22■□□□□ 0.03
PAAF1-214ENST00000544552 ZGPATQ8N5A5 531 aaKnown RBP15.22■□□□□ 0.03
PAAF1-214ENST00000544552 FLAD1Q8NFF5 587 aa15.22■□□□□ 0.03
PAAF1-214ENST00000544552 TNPO1Q92973 898 aaKnown RBP15.22■□□□□ 0.03
PAAF1-214ENST00000544552 ANKRD2Q9GZV1 360 aa15.22■□□□□ 0.03
PAAF1-214ENST00000544552 SH2B1Q9NRF2 756 aaPredicted RBP15.22■□□□□ 0.03
PAAF1-214ENST00000544552 CTNNA3Q9UI47 895 aa15.22■□□□□ 0.03
PAAF1-214ENST00000544552 ZNF804BA4D1E1 1349 aa15.22■□□□□ 0.03
PAAF1-214ENST00000544552 M0R2C6 588 aa15.21■□□□□ 0.03
PAAF1-214ENST00000544552 CYP21A2P08686 494 aa15.21■□□□□ 0.03
PAAF1-214ENST00000544552 WASHC4Q2M389 1173 aa15.21■□□□□ 0.03
PAAF1-214ENST00000544552 CNBD1Q8NA66 436 aa15.21■□□□□ 0.03
PAAF1-214ENST00000544552 PIH1D3Q9NQM4 214 aaKnown RBP15.21■□□□□ 0.03
PAAF1-214ENST00000544552 COL4A1P02462 1669 aa15.21■□□□□ 0.03
PAAF1-214ENST00000544552 SNAP23O00161 211 aa15.21■□□□□ 0.02
PAAF1-214ENST00000544552 HMGB1P09429 215 aaKnown RBP15.21■□□□□ 0.02
PAAF1-214ENST00000544552 RPS6KB1P23443 525 aa15.21■□□□□ 0.02
PAAF1-214ENST00000544552 BCAMP50895 628 aa15.21■□□□□ 0.02
PAAF1-214ENST00000544552 SLC9C2Q5TAH2 1124 aa15.21■□□□□ 0.02
PAAF1-214ENST00000544552 GBP4Q96PP9 640 aa15.21■□□□□ 0.02
PAAF1-214ENST00000544552 NEK1Q96PY6 1258 aa15.21■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms