RNA–Protein interactions for RNA: ENST00000537335.5

POLR1B-216, Transcript of RNA polymerase I subunit B, humanhuman

TSL 2 BASIC

Gene POLR1B, Length 4,961 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1B-216ENST00000537335 CCDC65Q8IXS2 484 aa13.35□□□□□ -0.27
POLR1B-216ENST00000537335 GSDMBQ8TAX9 411 aa13.35□□□□□ -0.27
POLR1B-216ENST00000537335 CXorf56Q9H5V9 222 aa13.35□□□□□ -0.27
POLR1B-216ENST00000537335 CBX8Q9HC52 389 aa13.35□□□□□ -0.27
POLR1B-216ENST00000537335 PDE11AQ9HCR9 933 aa13.35□□□□□ -0.27
POLR1B-216ENST00000537335 ATP2A1O14983 1001 aa13.35□□□□□ -0.27
POLR1B-216ENST00000537335 KRT13P13646 458 aa13.35□□□□□ -0.27
POLR1B-216ENST00000537335 ZNF131P52739 623 aa13.35□□□□□ -0.27
POLR1B-216ENST00000537335 HDGFL1Q5TGJ6 251 aa13.35□□□□□ -0.27
POLR1B-216ENST00000537335 FYB2Q5VWT5 728 aa13.35□□□□□ -0.27
POLR1B-216ENST00000537335 SPG7Q9UQ90 795 aa13.35□□□□□ -0.27
POLR1B-216ENST00000537335 RANBP1P43487 201 aa13.35□□□□□ -0.27
POLR1B-216ENST00000537335 NLRP5P59047 1200 aa13.35□□□□□ -0.27
POLR1B-216ENST00000537335 PAK2Q13177 524 aa13.34□□□□□ -0.27
POLR1B-216ENST00000537335 RUFY3Q7L099 469 aa13.34□□□□□ -0.27
POLR1B-216ENST00000537335 NECAB1Q8N987 351 aa13.34□□□□□ -0.27
POLR1B-216ENST00000537335 KLHDC4Q8TBB5 520 aa13.34□□□□□ -0.27
POLR1B-216ENST00000537335 ORC3Q9UBD5 711 aaPredicted RBP13.34□□□□□ -0.27
POLR1B-216ENST00000537335 RPGRIP1Q96KN7 1286 aa13.34□□□□□ -0.27
POLR1B-216ENST00000537335 TMEM63CQ9P1W3 806 aa13.34□□□□□ -0.27
POLR1B-216ENST00000537335 AKAP2Q9Y2D5 859 aa13.34□□□□□ -0.27
POLR1B-216ENST00000537335 ETF1P62495 437 aaKnown RBP13.34□□□□□ -0.27
POLR1B-216ENST00000537335 RRAGBQ5VZM2 374 aa13.34□□□□□ -0.27
POLR1B-216ENST00000537335 CCDC63Q8NA47 563 aa13.34□□□□□ -0.27
POLR1B-216ENST00000537335 TSGA10Q9BZW7 698 aa13.34□□□□□ -0.27
POLR1B-216ENST00000537335 SDSP20132 328 aa13.34□□□□□ -0.27
POLR1B-216ENST00000537335 NUF2Q9BZD4 464 aa13.34□□□□□ -0.27
POLR1B-216ENST00000537335 FAM204AQ9H8W3 233 aa13.34□□□□□ -0.27
POLR1B-216ENST00000537335 ANKRD30BQ9BXX2 1392 aa13.34□□□□□ -0.27
POLR1B-216ENST00000537335 STMN1P16949 149 aa13.33□□□□□ -0.27
POLR1B-216ENST00000537335 CCDC62Q6P9F0 684 aa13.33□□□□□ -0.27
POLR1B-216ENST00000537335 CCDC26Q8TAB7 109 aa13.33□□□□□ -0.27
POLR1B-216ENST00000537335 SLMAPQ14BN4 828 aa13.33□□□□□ -0.28
POLR1B-216ENST00000537335 IQCA1Q86XH1 822 aa13.33□□□□□ -0.28
POLR1B-216ENST00000537335 SPAG5Q96R06 1193 aa13.33□□□□□ -0.28
POLR1B-216ENST00000537335 GOLGA8BA8MQT2 603 aa13.33□□□□□ -0.28
POLR1B-216ENST00000537335 ATP2A2P16615 1042 aaKnown RBP13.33□□□□□ -0.28
POLR1B-216ENST00000537335 FAN1Q9Y2M0 1017 aa13.33□□□□□ -0.28
POLR1B-216ENST00000537335 NUTM2FA1L443 756 aa13.33□□□□□ -0.28
POLR1B-216ENST00000537335 HGSO14964 777 aaPredicted RBP13.33□□□□□ -0.28
POLR1B-216ENST00000537335 AMPD3Q01432 767 aa13.33□□□□□ -0.28
POLR1B-216ENST00000537335 TAOK1Q7L7X3 1001 aa13.33□□□□□ -0.28
POLR1B-216ENST00000537335 NUTM2AQ8IVF1 878 aaPredicted RBP13.33□□□□□ -0.28
POLR1B-216ENST00000537335 HMG20BQ9P0W2 317 aa13.32□□□□□ -0.28
POLR1B-216ENST00000537335 DDX41Q9UJV9 622 aaKnown RBP13.32□□□□□ -0.28
POLR1B-216ENST00000537335 ATAD2Q6PL18 1390 aa13.32□□□□□ -0.28
POLR1B-216ENST00000537335 TMPOP42166 694 aaKnown RBP13.32□□□□□ -0.28
POLR1B-216ENST00000537335 DDX21Q9NR30 783 aaKnown RBP eCLIP13.32□□□□□ -0.28
POLR1B-216ENST00000537335 PPP1R9AQ9ULJ8 1098 aa13.32□□□□□ -0.28
POLR1B-216ENST00000537335 ZBTB22O15209 634 aa13.32□□□□□ -0.28
POLR1B-216ENST00000537335 CALCOCO2Q13137 446 aa13.32□□□□□ -0.28
POLR1B-216ENST00000537335 RABGGTAQ92696 567 aa13.32□□□□□ -0.28
POLR1B-216ENST00000537335 TSNARE1Q96NA8 513 aa13.32□□□□□ -0.28
POLR1B-216ENST00000537335 THEGQ9P2T0 379 aa13.32□□□□□ -0.28
POLR1B-216ENST00000537335 IRX4P78413 519 aa13.32□□□□□ -0.28
POLR1B-216ENST00000537335 SCOCQ9UIL1 159 aa13.32□□□□□ -0.28
POLR1B-216ENST00000537335 EIF3CLB5ME19 914 aaKnown RBP13.31□□□□□ -0.28
POLR1B-216ENST00000537335 IKQ13123 557 aaPredicted RBP13.31□□□□□ -0.28
POLR1B-216ENST00000537335 ATP2B3Q16720 1220 aa13.31□□□□□ -0.28
POLR1B-216ENST00000537335 CNKSR2Q8WXI2 1034 aa13.31□□□□□ -0.28
POLR1B-216ENST00000537335 EIF3CQ99613 913 aaKnown RBP13.31□□□□□ -0.28
POLR1B-216ENST00000537335 RNF40O75150 1001 aa13.31□□□□□ -0.28
POLR1B-216ENST00000537335 FKBP4Q02790 459 aaKnown RBP eCLIP13.31□□□□□ -0.28
POLR1B-216ENST00000537335 TMED1Q13445 227 aa13.31□□□□□ -0.28
POLR1B-216ENST00000537335 CCDC25Q86WR0 208 aa13.31□□□□□ -0.28
POLR1B-216ENST00000537335 GEMIN8Q9NWZ8 242 aaKnown RBP13.31□□□□□ -0.28
POLR1B-216ENST00000537335 GUCY2CP25092 1073 aa13.31□□□□□ -0.28
POLR1B-216ENST00000537335 IFT88Q13099 833 aa13.31□□□□□ -0.28
POLR1B-216ENST00000537335 DYNC1I2Q13409 638 aaKnown RBP13.31□□□□□ -0.28
POLR1B-216ENST00000537335 YY1AP1Q9H869 796 aa13.31□□□□□ -0.28
POLR1B-216ENST00000537335 SSRP1Q08945 709 aaKnown RBP13.31□□□□□ -0.28
POLR1B-216ENST00000537335 MTMR3Q13615 1198 aa13.31□□□□□ -0.28
POLR1B-216ENST00000537335 NEK1Q96PY6 1258 aa13.31□□□□□ -0.28
POLR1B-216ENST00000537335 SPTLC2O15270 562 aa13.3□□□□□ -0.28
POLR1B-216ENST00000537335 CETN1Q12798 172 aa13.3□□□□□ -0.28
POLR1B-216ENST00000537335 ESYT1Q9BSJ8 1104 aa13.3□□□□□ -0.28
POLR1B-216ENST00000537335 RAB34Q9BZG1 259 aa13.3□□□□□ -0.28
POLR1B-216ENST00000537335 CLSTN2Q9H4D0 955 aa13.3□□□□□ -0.28
POLR1B-216ENST00000537335 ACTR5Q9H9F9 607 aaPredicted RBP13.3□□□□□ -0.28
POLR1B-216ENST00000537335 ZWINTO95229 277 aa13.3□□□□□ -0.28
POLR1B-216ENST00000537335 ATP1A2P50993 1020 aa13.3□□□□□ -0.28
POLR1B-216ENST00000537335 FANCCQ00597 558 aa13.3□□□□□ -0.28
POLR1B-216ENST00000537335 TMEM132AQ24JP5 1023 aa13.3□□□□□ -0.28
POLR1B-216ENST00000537335 PDCD7Q8N8D1 485 aaKnown RBP13.3□□□□□ -0.28
POLR1B-216ENST00000537335 HAUS1Q96CS2 278 aa13.3□□□□□ -0.28
POLR1B-216ENST00000537335 PSMA7O14818 248 aa13.3□□□□□ -0.28
POLR1B-216ENST00000537335 TCERG1LQ5VWI1 586 aa13.3□□□□□ -0.28
POLR1B-216ENST00000537335 MYCNP04198 464 aaPredicted RBP13.29□□□□□ -0.28
POLR1B-216ENST00000537335 IARSP41252 1262 aaKnown RBP13.29□□□□□ -0.28
POLR1B-216ENST00000537335 LRMPQ12912 555 aa13.29□□□□□ -0.28
POLR1B-216ENST00000537335 GDAP1L1Q96MZ0 367 aa13.29□□□□□ -0.28
POLR1B-216ENST00000537335 TAF11Q15544 211 aa13.29□□□□□ -0.28
POLR1B-216ENST00000537335 LONRF2Q1L5Z9 754 aa13.29□□□□□ -0.28
POLR1B-216ENST00000537335 KRT71Q3SY84 523 aa13.29□□□□□ -0.28
POLR1B-216ENST00000537335 JAKMIP2Q96AA8 810 aa13.29□□□□□ -0.28
POLR1B-216ENST00000537335 GNL3LQ9NVN8 582 aaKnown RBP13.29□□□□□ -0.28
POLR1B-216ENST00000537335 ABCC11Q96J66 1382 aa13.29□□□□□ -0.28
POLR1B-216ENST00000537335 ACTN4O43707 911 aaKnown RBP13.29□□□□□ -0.28
POLR1B-216ENST00000537335 UBA7P41226 1012 aa13.29□□□□□ -0.28
POLR1B-216ENST00000537335 UBXN1Q04323 297 aa13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 60.6 ms