RNA–Protein interactions for RNA: ENST00000537024.5

SNHG1-203, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 5

Gene SNHG1, Length 532 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-203ENST00000537024 TREHO43280 583 aa6.15□□□□□ -1.42
SNHG1-203ENST00000537024 FZD6O60353 706 aa6.15□□□□□ -1.42
SNHG1-203ENST00000537024 P4HBP07237 508 aaKnown RBP6.15□□□□□ -1.42
SNHG1-203ENST00000537024 PRELPP51888 382 aa6.15□□□□□ -1.42
SNHG1-203ENST00000537024 TAGLNQ01995 201 aaKnown RBP6.15□□□□□ -1.42
SNHG1-203ENST00000537024 DGKZQ13574 1117 aa6.15□□□□□ -1.42
SNHG1-203ENST00000537024 C11orf91Q3C1V1 193 aa6.15□□□□□ -1.42
SNHG1-203ENST00000537024 SH3PXD2AQ5TCZ1 1133 aa6.15□□□□□ -1.42
SNHG1-203ENST00000537024 ZDHHC1Q8WTX9 485 aa6.15□□□□□ -1.42
SNHG1-203ENST00000537024 ZNF395Q9H8N7 513 aaPredicted RBP6.15□□□□□ -1.42
SNHG1-203ENST00000537024 PPP1R1BQ9UD71 204 aaPredicted RBP6.15□□□□□ -1.42
SNHG1-203ENST00000537024 PARP3Q9Y6F1 533 aa6.15□□□□□ -1.42
SNHG1-203ENST00000537024 CCDC18Q5T9S5 1454 aa6.15□□□□□ -1.43
SNHG1-203ENST00000537024 NRKQ7Z2Y5 1582 aa6.14□□□□□ -1.43
SNHG1-203ENST00000537024 EIF2AK4Q9P2K8 1649 aaKnown RBP6.14□□□□□ -1.43
SNHG1-203ENST00000537024 TIMP2P16035 220 aa6.14□□□□□ -1.43
SNHG1-203ENST00000537024 VAMP1P23763 118 aa6.14□□□□□ -1.43
SNHG1-203ENST00000537024 FGD1P98174 961 aa6.14□□□□□ -1.43
SNHG1-203ENST00000537024 PLCB3Q01970 1234 aa6.14□□□□□ -1.43
SNHG1-203ENST00000537024 GNASQ5JWF2 1037 aa6.14□□□□□ -1.43
SNHG1-203ENST00000537024 SLC27A3Q5K4L6 730 aa6.14□□□□□ -1.43
SNHG1-203ENST00000537024 RHBDD1Q8TEB9 315 aa6.14□□□□□ -1.43
SNHG1-203ENST00000537024 DDX17Q92841 729 aaKnown RBP6.14□□□□□ -1.43
SNHG1-203ENST00000537024 KLF16Q9BXK1 252 aaPredicted RBP6.14□□□□□ -1.43
SNHG1-203ENST00000537024 PHACTR1Q9C0D0 580 aa6.14□□□□□ -1.43
SNHG1-203ENST00000537024 IGSF5Q9NSI5 407 aa6.14□□□□□ -1.43
SNHG1-203ENST00000537024 MYOM1P52179 1685 aa6.14□□□□□ -1.43
SNHG1-203ENST00000537024 ZBTB39O15060 712 aa6.13□□□□□ -1.43
SNHG1-203ENST00000537024 CAPN5O15484 640 aaPredicted RBP6.13□□□□□ -1.43
SNHG1-203ENST00000537024 TCF3P15923 654 aa6.13□□□□□ -1.43
SNHG1-203ENST00000537024 USP5P45974 858 aa6.13□□□□□ -1.43
SNHG1-203ENST00000537024 MAPK8P45983 427 aa6.13□□□□□ -1.43
SNHG1-203ENST00000537024 FMR1Q06787 632 aaKnown RBP eCLIP6.13□□□□□ -1.43
SNHG1-203ENST00000537024 ATCAYQ86WG3 371 aa6.13□□□□□ -1.43
SNHG1-203ENST00000537024 ZNF295-AS1Q8N0V1 137 aa6.13□□□□□ -1.43
SNHG1-203ENST00000537024 IFT43Q96FT9 208 aa6.13□□□□□ -1.43
SNHG1-203ENST00000537024 KLK14Q9P0G3 267 aa6.13□□□□□ -1.43
SNHG1-203ENST00000537024 ARHGAP31Q2M1Z3 1444 aa6.13□□□□□ -1.43
SNHG1-203ENST00000537024 TRPM2O94759 1503 aa6.13□□□□□ -1.43
SNHG1-203ENST00000537024 SLIT2O94813 1529 aa6.13□□□□□ -1.43
SNHG1-203ENST00000537024 LDHBP07195 334 aaKnown RBP6.12□□□□□ -1.43
SNHG1-203ENST00000537024 PCSK2P16519 638 aa6.12□□□□□ -1.43
SNHG1-203ENST00000537024 MZF1P28698 734 aaPredicted RBP6.12□□□□□ -1.43
SNHG1-203ENST00000537024 GPC1P35052 558 aa6.12□□□□□ -1.43
SNHG1-203ENST00000537024 ZAP70P43403 619 aa6.12□□□□□ -1.43
SNHG1-203ENST00000537024 ATP2B2Q01814 1243 aa6.12□□□□□ -1.43
SNHG1-203ENST00000537024 XPCQ01831 940 aaPredicted RBP6.12□□□□□ -1.43
SNHG1-203ENST00000537024 DNM1Q05193 864 aaKnown RBP6.12□□□□□ -1.43
SNHG1-203ENST00000537024 EHHADHQ08426 723 aa6.12□□□□□ -1.43
SNHG1-203ENST00000537024 C1orf53Q5VUE5 145 aa6.12□□□□□ -1.43
SNHG1-203ENST00000537024 ETFBKMTQ8IXQ9 262 aa6.12□□□□□ -1.43
SNHG1-203ENST00000537024 FAM129BQ96TA1 746 aa6.12□□□□□ -1.43
SNHG1-203ENST00000537024 SPON1Q9HCB6 807 aa6.12□□□□□ -1.43
SNHG1-203ENST00000537024 PLEKHG1Q9ULL1 1385 aa6.12□□□□□ -1.43
SNHG1-203ENST00000537024 POLIQ9UNA4 740 aa6.12□□□□□ -1.43
SNHG1-203ENST00000537024 CASZ1Q86V15 1759 aa6.11□□□□□ -1.43
SNHG1-203ENST00000537024 PTPN23Q9H3S7 1636 aa6.11□□□□□ -1.43
SNHG1-203ENST00000537024 CCDC141Q6ZP82 1450 aa6.11□□□□□ -1.43
SNHG1-203ENST00000537024 ITGAEP38570 1179 aa6.11□□□□□ -1.43
SNHG1-203ENST00000537024 PLA2G4AP47712 749 aa6.11□□□□□ -1.43
SNHG1-203ENST00000537024 DSC3Q14574 896 aa6.11□□□□□ -1.43
SNHG1-203ENST00000537024 HIF1AQ16665 826 aa6.11□□□□□ -1.43
SNHG1-203ENST00000537024 TSNAXIP1Q2TAA8 658 aa6.11□□□□□ -1.43
SNHG1-203ENST00000537024 NBPF1Q3BBV0 1214 aa6.11□□□□□ -1.43
SNHG1-203ENST00000537024 FAM26DQ5JW98 314 aa6.11□□□□□ -1.43
SNHG1-203ENST00000537024 KRT27Q7Z3Y8 459 aa6.11□□□□□ -1.43
SNHG1-203ENST00000537024 MEIOBQ8N635 442 aa6.11□□□□□ -1.43
SNHG1-203ENST00000537024 TTC16Q8NEE8 873 aa6.11□□□□□ -1.43
SNHG1-203ENST00000537024 EDEM1Q92611 657 aa6.11□□□□□ -1.43
SNHG1-203ENST00000537024 TSEN34Q9BSV6 310 aaKnown RBP6.11□□□□□ -1.43
SNHG1-203ENST00000537024 XRN1Q8IZH2 1706 aaKnown RBP6.11□□□□□ -1.43
SNHG1-203ENST00000537024 TMEM131LA2VDJ0 1609 aa6.1□□□□□ -1.43
SNHG1-203ENST00000537024 EHBP1L1Q8N3D4 1523 aa6.1□□□□□ -1.43
SNHG1-203ENST00000537024 ZFYVE9O95405 1425 aa6.1□□□□□ -1.43
SNHG1-203ENST00000537024 SOS2Q07890 1332 aaPredicted RBP6.1□□□□□ -1.43
SNHG1-203ENST00000537024 GPR182O15218 404 aa6.1□□□□□ -1.43
SNHG1-203ENST00000537024 KCNQ2O43526 872 aa6.1□□□□□ -1.43
SNHG1-203ENST00000537024 PRPF40AO75400 957 aaKnown RBP6.1□□□□□ -1.43
SNHG1-203ENST00000537024 UPP2O95045 317 aa6.1□□□□□ -1.43
SNHG1-203ENST00000537024 HSPA6P17066 643 aa6.1□□□□□ -1.43
SNHG1-203ENST00000537024 TXLNAP40222 546 aa6.1□□□□□ -1.43
SNHG1-203ENST00000537024 GSK3AP49840 483 aa6.1□□□□□ -1.43
SNHG1-203ENST00000537024 RNF144AP50876 292 aaPredicted RBP6.1□□□□□ -1.43
SNHG1-203ENST00000537024 EZH2Q15910 746 aaKnown RBP6.1□□□□□ -1.43
SNHG1-203ENST00000537024 COL13A1Q5TAT6 717 aaPredicted RBP6.1□□□□□ -1.43
SNHG1-203ENST00000537024 TREML1Q86YW5 311 aa6.1□□□□□ -1.43
SNHG1-203ENST00000537024 RHPN1Q8TCX5 695 aa6.1□□□□□ -1.43
SNHG1-203ENST00000537024 AIDAQ96BJ3 306 aa6.1□□□□□ -1.43
SNHG1-203ENST00000537024 ALKBH8Q96BT7 664 aaKnown RBP6.1□□□□□ -1.43
SNHG1-203ENST00000537024 GRIP2Q9C0E4 1043 aa6.1□□□□□ -1.43
SNHG1-203ENST00000537024 NIF3L1Q9GZT8 377 aa6.1□□□□□ -1.43
SNHG1-203ENST00000537024 MRS2Q9HD23 443 aa6.1□□□□□ -1.43
SNHG1-203ENST00000537024 POLMQ9NP87 494 aaPredicted RBP6.1□□□□□ -1.43
SNHG1-203ENST00000537024 FAM13BQ9NYF5 915 aa6.1□□□□□ -1.43
SNHG1-203ENST00000537024 CFDP1Q9UEE9 299 aaPredicted RBP6.1□□□□□ -1.43
SNHG1-203ENST00000537024 NALCNQ8IZF0 1738 aa6.1□□□□□ -1.43
SNHG1-203ENST00000537024 PARD3Q8TEW0 1356 aa6.09□□□□□ -1.43
SNHG1-203ENST00000537024 PIK3R4Q99570 1358 aa6.09□□□□□ -1.43
SNHG1-203ENST00000537024 NWD2Q9ULI1 1742 aa6.09□□□□□ -1.43
SNHG1-203ENST00000537024 IGSF3O75054 1194 aa6.09□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms