RNA–Protein interactions for RNA: ENST00000536634.5

CLIP1-207, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 3

Gene CLIP1, Length 929 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-207ENST00000536634 GDF6Q6KF10 455 aaPredicted RBP9.77□□□□□ -0.85
CLIP1-207ENST00000536634 ADAMTSL4Q6UY14 1074 aa9.77□□□□□ -0.85
CLIP1-207ENST00000536634 DMRTC2Q8IXT2 367 aaPredicted RBP9.77□□□□□ -0.85
CLIP1-207ENST00000536634 RBSNQ9H1K0 784 aa9.77□□□□□ -0.85
CLIP1-207ENST00000536634 ARHGEF11O15085 1522 aa9.77□□□□□ -0.85
CLIP1-207ENST00000536634 URB2Q14146 1524 aaKnown RBP9.77□□□□□ -0.85
CLIP1-207ENST00000536634 BAG6P46379 1132 aa9.76□□□□□ -0.85
CLIP1-207ENST00000536634 SPACA7Q96KW9 195 aa9.76□□□□□ -0.85
CLIP1-207ENST00000536634 A0A0A0MRY4 1105 aa9.75□□□□□ -0.85
CLIP1-207ENST00000536634 SPDYE3A6NKU9 549 aa9.75□□□□□ -0.85
CLIP1-207ENST00000536634 GPR182O15218 404 aa9.75□□□□□ -0.85
CLIP1-207ENST00000536634 PLA2G4EQ3MJ16 856 aa9.75□□□□□ -0.85
CLIP1-207ENST00000536634 CEP135Q66GS9 1140 aa9.75□□□□□ -0.85
CLIP1-207ENST00000536634 GPAT2Q6NUI2 795 aa9.75□□□□□ -0.85
CLIP1-207ENST00000536634 ALYREFQ86V81 257 aaKnown RBP9.75□□□□□ -0.85
CLIP1-207ENST00000536634 AEBP1Q8IUX7 1158 aa9.75□□□□□ -0.85
CLIP1-207ENST00000536634 ZFYVE28Q9HCC9 887 aa9.75□□□□□ -0.85
CLIP1-207ENST00000536634 TRPA1O75762 1119 aa9.74□□□□□ -0.85
CLIP1-207ENST00000536634 SPATA31C1P0DKV0 1188 aa9.74□□□□□ -0.85
CLIP1-207ENST00000536634 WFDC8Q8IUA0 241 aa9.74□□□□□ -0.85
CLIP1-207ENST00000536634 PBX4Q9BYU1 374 aa9.74□□□□□ -0.85
CLIP1-207ENST00000536634 CFTRP13569 1480 aa9.73□□□□□ -0.85
CLIP1-207ENST00000536634 POLR3DP05423 398 aaPredicted RBP9.73□□□□□ -0.85
CLIP1-207ENST00000536634 TRIM28Q13263 835 aaKnown RBP9.73□□□□□ -0.85
CLIP1-207ENST00000536634 ORC1Q13415 861 aa9.73□□□□□ -0.85
CLIP1-207ENST00000536634 PRRT3Q5FWE3 981 aa9.73□□□□□ -0.85
CLIP1-207ENST00000536634 TMC1Q8TDI8 760 aa9.73□□□□□ -0.85
CLIP1-207ENST00000536634 PMEPA1Q969W9 287 aa9.73□□□□□ -0.85
CLIP1-207ENST00000536634 HHIPQ96QV1 700 aa9.73□□□□□ -0.85
CLIP1-207ENST00000536634 CITED4Q96RK1 184 aa9.73□□□□□ -0.85
CLIP1-207ENST00000536634 RBCK1Q9BYM8 510 aa9.73□□□□□ -0.85
CLIP1-207ENST00000536634 KRTAP4-8Q9BYQ9 185 aa9.73□□□□□ -0.85
CLIP1-207ENST00000536634 LACRTQ9GZZ8 138 aa9.73□□□□□ -0.85
CLIP1-207ENST00000536634 LATS2Q9NRM7 1088 aa9.73□□□□□ -0.85
CLIP1-207ENST00000536634 DCTN4Q9UJW0 460 aa9.73□□□□□ -0.85
CLIP1-207ENST00000536634 NFKBIEO00221 500 aa9.72□□□□□ -0.85
CLIP1-207ENST00000536634 PDE3BQ13370 1112 aa9.72□□□□□ -0.85
CLIP1-207ENST00000536634 USPL1Q5W0Q7 1092 aa9.72□□□□□ -0.85
CLIP1-207ENST00000536634 IL22RA1Q8N6P7 574 aa9.72□□□□□ -0.85
CLIP1-207ENST00000536634 POP1Q99575 1024 aaKnown RBP9.72□□□□□ -0.85
CLIP1-207ENST00000536634 DZANK1Q9NVP4 752 aa9.72□□□□□ -0.85
CLIP1-207ENST00000536634 AMOTL2Q9Y2J4 779 aa9.72□□□□□ -0.85
CLIP1-207ENST00000536634 ZNF608Q9ULD9 1512 aaPredicted RBP9.72□□□□□ -0.85
CLIP1-207ENST00000536634 SMNDC1O75940 238 aaKnown RBP eCLIP9.71□□□□□ -0.86
CLIP1-207ENST00000536634 CHRNA4P43681 627 aa9.71□□□□□ -0.86
CLIP1-207ENST00000536634 GRIK4Q16099 956 aa9.71□□□□□ -0.86
CLIP1-207ENST00000536634 TMC7Q7Z402 723 aa9.71□□□□□ -0.86
CLIP1-207ENST00000536634 CD163Q86VB7 1156 aa9.71□□□□□ -0.86
CLIP1-207ENST00000536634 FMR1NBQ8N0W7 255 aaPredicted RBP9.71□□□□□ -0.86
CLIP1-207ENST00000536634 ZKSCAN3Q9BRR0 538 aa9.71□□□□□ -0.86
CLIP1-207ENST00000536634 NIF3L1Q9GZT8 377 aa9.71□□□□□ -0.86
CLIP1-207ENST00000536634 C1QTNF9BB2RNN3 333 aa9.7□□□□□ -0.86
CLIP1-207ENST00000536634 DEAF1O75398 565 aaPredicted RBP9.7□□□□□ -0.86
CLIP1-207ENST00000536634 MAPK1P28482 360 aa9.7□□□□□ -0.86
CLIP1-207ENST00000536634 RAC1P63000 192 aa9.7□□□□□ -0.86
CLIP1-207ENST00000536634 PEAR1Q5VY43 1037 aaPredicted RBP9.7□□□□□ -0.86
CLIP1-207ENST00000536634 PATL2C9JE40 543 aaKnown RBP9.69□□□□□ -0.86
CLIP1-207ENST00000536634 OSMRQ99650 979 aa9.69□□□□□ -0.86
CLIP1-207ENST00000536634 EDN3P14138 238 aa9.68□□□□□ -0.86
CLIP1-207ENST00000536634 ELNP15502 786 aa9.68□□□□□ -0.86
CLIP1-207ENST00000536634 CYB5RLQ6IPT4 315 aa9.68□□□□□ -0.86
CLIP1-207ENST00000536634 SHISA2Q6UWI4 295 aa9.68□□□□□ -0.86
CLIP1-207ENST00000536634 SH2B1Q9NRF2 756 aaPredicted RBP9.68□□□□□ -0.86
CLIP1-207ENST00000536634 PDE2AO00408 941 aaPredicted RBP9.67□□□□□ -0.86
CLIP1-207ENST00000536634 CDC27P30260 824 aa9.67□□□□□ -0.86
CLIP1-207ENST00000536634 TXNDC11Q6PKC3 985 aa9.67□□□□□ -0.86
CLIP1-207ENST00000536634 FBXO11Q86XK2 927 aa9.67□□□□□ -0.86
CLIP1-207ENST00000536634 DTWD1Q8N5C7 304 aa9.67□□□□□ -0.86
CLIP1-207ENST00000536634 ALKBH8Q96BT7 664 aaKnown RBP9.67□□□□□ -0.86
CLIP1-207ENST00000536634 DMRTB1Q96MA1 342 aa9.67□□□□□ -0.86
CLIP1-207ENST00000536634 ARAP1Q96P48 1450 aa9.66□□□□□ -0.86
CLIP1-207ENST00000536634 EIF1AYO14602 144 aaKnown RBP9.66□□□□□ -0.86
CLIP1-207ENST00000536634 PROCP04070 461 aa9.66□□□□□ -0.86
CLIP1-207ENST00000536634 SELPP16109 830 aa9.66□□□□□ -0.86
CLIP1-207ENST00000536634 EPHA1P21709 976 aa9.66□□□□□ -0.86
CLIP1-207ENST00000536634 CDC25BP30305 580 aa9.66□□□□□ -0.86
CLIP1-207ENST00000536634 GALNT12Q8IXK2 581 aa9.66□□□□□ -0.86
CLIP1-207ENST00000536634 TMEM102Q8N9M5 508 aaPredicted RBP9.66□□□□□ -0.86
CLIP1-207ENST00000536634 NXPE3Q969Y0 559 aa9.66□□□□□ -0.86
CLIP1-207ENST00000536634 PPME1Q9Y570 386 aa9.66□□□□□ -0.86
CLIP1-207ENST00000536634 LINC01387J3KSC0 135 aa9.65□□□□□ -0.86
CLIP1-207ENST00000536634 CPNE3O75131 537 aaKnown RBP9.65□□□□□ -0.86
CLIP1-207ENST00000536634 APBA3O96018 575 aa9.65□□□□□ -0.86
CLIP1-207ENST00000536634 NEFLP07196 543 aa9.65□□□□□ -0.86
CLIP1-207ENST00000536634 PTPRAP18433 802 aa9.65□□□□□ -0.86
CLIP1-207ENST00000536634 SETDB1Q15047 1291 aa9.65□□□□□ -0.86
CLIP1-207ENST00000536634 CACTIN-AS1Q8N1I8 211 aa9.65□□□□□ -0.86
CLIP1-207ENST00000536634 SPOCK3Q9BQ16 436 aa9.65□□□□□ -0.86
CLIP1-207ENST00000536634 ADAM19Q9H013 955 aa9.65□□□□□ -0.86
CLIP1-207ENST00000536634 A0A1W2PP55 124 aa9.64□□□□□ -0.87
CLIP1-207ENST00000536634 DSC3Q14574 896 aa9.64□□□□□ -0.87
CLIP1-207ENST00000536634 IFT140Q96RY7 1462 aa9.64□□□□□ -0.87
CLIP1-207ENST00000536634 EIF4G3O43432 1585 aaKnown RBP9.63□□□□□ -0.87
CLIP1-207ENST00000536634 METTL12A8MUP2 240 aa9.63□□□□□ -0.87
CLIP1-207ENST00000536634 TREHO43280 583 aa9.63□□□□□ -0.87
CLIP1-207ENST00000536634 CSRNP1Q96S65 589 aa9.63□□□□□ -0.87
CLIP1-207ENST00000536634 NPHS2Q9NP85 383 aa9.63□□□□□ -0.87
CLIP1-207ENST00000536634 CHD1O14646 1710 aa9.62□□□□□ -0.87
CLIP1-207ENST00000536634 PRDM2Q13029 1718 aa9.62□□□□□ -0.87
CLIP1-207ENST00000536634 DLL1O00548 723 aa9.62□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms