RNA–Protein interactions for RNA: ENST00000534313.5

SIPA1-209, Transcript of signal-induced proliferation-associated 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIPA1, Length 3,521 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIPA1-209ENST00000534313 ADD1P35611 737 aaKnown RBP20.28■□□□□ 0.84
SIPA1-209ENST00000534313 ZNF771Q7L3S4 317 aaPredicted RBP20.28■□□□□ 0.84
SIPA1-209ENST00000534313 GJB4Q9NTQ9 266 aa20.28■□□□□ 0.84
SIPA1-209ENST00000534313 ARID5BQ14865 1188 aa20.28■□□□□ 0.84
SIPA1-209ENST00000534313 PI16Q6UXB8 463 aa20.28■□□□□ 0.84
SIPA1-209ENST00000534313 SMARCC2Q8TAQ2 1214 aa20.28■□□□□ 0.84
SIPA1-209ENST00000534313 PDIA4P13667 645 aaKnown RBP20.28■□□□□ 0.84
SIPA1-209ENST00000534313 ME1P48163 572 aa20.28■□□□□ 0.84
SIPA1-209ENST00000534313 GORABQ5T7V8 394 aa20.28■□□□□ 0.84
SIPA1-209ENST00000534313 OSBP2Q969R2 916 aa20.28■□□□□ 0.84
SIPA1-209ENST00000534313 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP20.28■□□□□ 0.84
SIPA1-209ENST00000534313 SH3TC1Q8TE82 1336 aa20.27■□□□□ 0.84
SIPA1-209ENST00000534313 CCDC144BQ3MJ40 725 aa20.27■□□□□ 0.84
SIPA1-209ENST00000534313 CCDC144CPQ8IYA2 1237 aa20.27■□□□□ 0.84
SIPA1-209ENST00000534313 ZSCAN16Q9H4T2 348 aaPredicted RBP20.27■□□□□ 0.84
SIPA1-209ENST00000534313 CLIP2Q9UDT6 1046 aa20.27■□□□□ 0.84
SIPA1-209ENST00000534313 ZMYM1Q5SVZ6 1142 aa20.27■□□□□ 0.84
SIPA1-209ENST00000534313 TOM1L2Q6ZVM7 507 aa20.27■□□□□ 0.84
SIPA1-209ENST00000534313 EYA2O00167 538 aa20.27■□□□□ 0.83
SIPA1-209ENST00000534313 TRPM3Q9HCF6 1732 aaPredicted RBP20.26■□□□□ 0.83
SIPA1-209ENST00000534313 POLR3DP05423 398 aaPredicted RBP20.26■□□□□ 0.83
SIPA1-209ENST00000534313 PDIA3P30101 505 aaKnown RBP20.26■□□□□ 0.83
SIPA1-209ENST00000534313 BCL2L12Q9HB09 334 aa20.26■□□□□ 0.83
SIPA1-209ENST00000534313 SCN11AQ9UI33 1791 aa20.26■□□□□ 0.83
SIPA1-209ENST00000534313 AFDNP55196 1824 aaKnown RBP20.26■□□□□ 0.83
SIPA1-209ENST00000534313 IL15P40933 162 aaPredicted RBP20.26■□□□□ 0.83
SIPA1-209ENST00000534313 EXOSC10Q01780 885 aaKnown RBP20.26■□□□□ 0.83
SIPA1-209ENST00000534313 RBM43Q6ZSC3 357 aaKnown RBP20.26■□□□□ 0.83
SIPA1-209ENST00000534313 HELLSQ9NRZ9 838 aa20.26■□□□□ 0.83
SIPA1-209ENST00000534313 GOLGA6L19H0YKK7 550 aa20.25■□□□□ 0.83
SIPA1-209ENST00000534313 RNF113AO15541 343 aaKnown RBP20.25■□□□□ 0.83
SIPA1-209ENST00000534313 SCARF1Q14162 830 aa20.25■□□□□ 0.83
SIPA1-209ENST00000534313 PRDM4Q9UKN5 801 aa20.25■□□□□ 0.83
SIPA1-209ENST00000534313 TMEM94Q12767 1356 aa20.25■□□□□ 0.83
SIPA1-209ENST00000534313 ZSCAN25Q6NSZ9 544 aa20.24■□□□□ 0.83
SIPA1-209ENST00000534313 PLA2G4DQ86XP0 818 aa20.24■□□□□ 0.83
SIPA1-209ENST00000534313 SYNE4Q8N205 404 aa20.24■□□□□ 0.83
SIPA1-209ENST00000534313 FSIP1Q8NA03 581 aa20.24■□□□□ 0.83
SIPA1-209ENST00000534313 TDRD7Q8NHU6 1098 aaKnown RBP20.24■□□□□ 0.83
SIPA1-209ENST00000534313 CACTINQ8WUQ7 758 aaKnown RBP20.24■□□□□ 0.83
SIPA1-209ENST00000534313 DSCC1Q9BVC3 393 aa20.24■□□□□ 0.83
SIPA1-209ENST00000534313 HMGB1P09429 215 aaKnown RBP20.24■□□□□ 0.83
SIPA1-209ENST00000534313 CCDC73Q6ZRK6 1079 aa20.24■□□□□ 0.83
SIPA1-209ENST00000534313 FAM89AQ96GI7 184 aa20.24■□□□□ 0.83
SIPA1-209ENST00000534313 CAMTA1Q9Y6Y1 1673 aa20.24■□□□□ 0.83
SIPA1-209ENST00000534313 TPM3P06753 285 aa20.24■□□□□ 0.83
SIPA1-209ENST00000534313 ILDR1Q86SU0 546 aaPredicted RBP20.24■□□□□ 0.83
SIPA1-209ENST00000534313 CEP126Q9P2H0 1117 aa20.24■□□□□ 0.83
SIPA1-209ENST00000534313 A0A1B0GVL5 298 aa20.23■□□□□ 0.83
SIPA1-209ENST00000534313 ADAMTS7Q9UKP4 1686 aa20.23■□□□□ 0.83
SIPA1-209ENST00000534313 TTC39AQ5SRH9 613 aa20.23■□□□□ 0.83
SIPA1-209ENST00000534313 FILIP1Q7Z7B0 1213 aa20.23■□□□□ 0.83
SIPA1-209ENST00000534313 BECN2A8MW95 431 aa20.22■□□□□ 0.83
SIPA1-209ENST00000534313 KINO60870 393 aaKnown RBP20.22■□□□□ 0.83
SIPA1-209ENST00000534313 FDPSP14324 419 aaKnown RBP20.22■□□□□ 0.83
SIPA1-209ENST00000534313 ZCRB1Q8TBF4 217 aaKnown RBP20.22■□□□□ 0.83
SIPA1-209ENST00000534313 LLPHQ9BRT6 129 aaKnown RBP20.22■□□□□ 0.83
SIPA1-209ENST00000534313 PRDM11Q9NQV5 511 aa20.22■□□□□ 0.83
SIPA1-209ENST00000534313 STRN4Q9NRL3 753 aa20.22■□□□□ 0.83
SIPA1-209ENST00000534313 RCOR1Q9UKL0 485 aa20.22■□□□□ 0.83
SIPA1-209ENST00000534313 SNW1Q13573 536 aaKnown RBP20.22■□□□□ 0.83
SIPA1-209ENST00000534313 CCDC57Q2TAC2 916 aa20.22■□□□□ 0.83
SIPA1-209ENST00000534313 DENND2AQ9ULE3 1009 aa20.22■□□□□ 0.83
SIPA1-209ENST00000534313 PALLDQ8WX93 1383 aa20.22■□□□□ 0.83
SIPA1-209ENST00000534313 TAF7LQ5H9L4 462 aa20.22■□□□□ 0.83
SIPA1-209ENST00000534313 NAA16Q6N069 864 aaPredicted RBP20.22■□□□□ 0.83
SIPA1-209ENST00000534313 IQCB1Q15051 598 aa20.21■□□□□ 0.83
SIPA1-209ENST00000534313 XAGE2Q96GT9 111 aa20.21■□□□□ 0.83
SIPA1-209ENST00000534313 U2AF2P26368 475 aaKnown RBP eCLIP20.2■□□□□ 0.82
SIPA1-209ENST00000534313 ZAP70P43403 619 aa20.2■□□□□ 0.82
SIPA1-209ENST00000534313 PUS7LQ9H0K6 701 aaKnown RBP20.2■□□□□ 0.82
SIPA1-209ENST00000534313 RFX7Q2KHR2 1363 aa20.2■□□□□ 0.82
SIPA1-209ENST00000534313 CARMIL3Q8ND23 1372 aa20.2■□□□□ 0.82
SIPA1-209ENST00000534313 ARFGEF2Q9Y6D5 1785 aa20.2■□□□□ 0.82
SIPA1-209ENST00000534313 RXRAP19793 462 aa20.2■□□□□ 0.82
SIPA1-209ENST00000534313 PCDHA7Q9UN72 937 aa20.2■□□□□ 0.82
SIPA1-209ENST00000534313 CLIC4Q9Y696 253 aa20.2■□□□□ 0.82
SIPA1-209ENST00000534313 KLF18A0A0U1RQI7 1052 aa20.19■□□□□ 0.82
SIPA1-209ENST00000534313 SDF4Q9BRK5 362 aa20.19■□□□□ 0.82
SIPA1-209ENST00000534313 BIN1O00499 593 aa20.19■□□□□ 0.82
SIPA1-209ENST00000534313 FOXP2O15409 715 aa20.19■□□□□ 0.82
SIPA1-209ENST00000534313 FGAP02671 866 aa20.19■□□□□ 0.82
SIPA1-209ENST00000534313 GPTP24298 496 aa20.19■□□□□ 0.82
SIPA1-209ENST00000534313 NAA30Q147X3 362 aaPredicted RBP20.19■□□□□ 0.82
SIPA1-209ENST00000534313 SF3A1Q15459 793 aaKnown RBP20.19■□□□□ 0.82
SIPA1-209ENST00000534313 TPD52L1Q16890 204 aaPredicted RBP20.19■□□□□ 0.82
SIPA1-209ENST00000534313 CCDC158Q5M9N0 1113 aa20.19■□□□□ 0.82
SIPA1-209ENST00000534313 CCDC191Q8NCU4 936 aa20.19■□□□□ 0.82
SIPA1-209ENST00000534313 ZNF396Q96N95 335 aaPredicted RBP20.19■□□□□ 0.82
SIPA1-209ENST00000534313 TNNT1P13805 278 aa20.19■□□□□ 0.82
SIPA1-209ENST00000534313 GTF2F1P35269 517 aaKnown RBP eCLIP20.19■□□□□ 0.825e-6■□□□□ 9.2
SIPA1-209ENST00000534313 STX1AQ16623 288 aa20.19■□□□□ 0.82
SIPA1-209ENST00000534313 ISM2Q6H9L7 571 aa20.19■□□□□ 0.82
SIPA1-209ENST00000534313 AOPEPQ8N6M6 819 aa20.19■□□□□ 0.82
SIPA1-209ENST00000534313 MST1RQ04912 1400 aa20.18■□□□□ 0.82
SIPA1-209ENST00000534313 GOLGA8BA8MQT2 603 aa20.18■□□□□ 0.82
SIPA1-209ENST00000534313 NPHP1O15259 732 aa20.18■□□□□ 0.82
SIPA1-209ENST00000534313 PRC1O43663 620 aa20.18■□□□□ 0.82
SIPA1-209ENST00000534313 USP27XA6NNY8 438 aa20.18■□□□□ 0.82
SIPA1-209ENST00000534313 FAM160A1Q05DH4 1040 aa20.17■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 90.2 ms