RNA–Protein interactions for RNA: ENST00000533690.5

ATM-221, Transcript of ATM serine/threonine kinase, humanhuman

TSL 5

Gene ATM, Length 3,354 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATM-221ENST00000533690 CDC37L1Q7L3B6 337 aa4.7□□□□□ -1.66
ATM-221ENST00000533690 MB21D2Q8IYB1 491 aaPredicted RBP4.7□□□□□ -1.66
ATM-221ENST00000533690 CNTROBQ8N137 903 aa4.7□□□□□ -1.66
ATM-221ENST00000533690 NKX2-3Q8TAU0 364 aa4.7□□□□□ -1.66
ATM-221ENST00000533690 ZNF274Q96GC6 653 aaPredicted RBP4.7□□□□□ -1.66
ATM-221ENST00000533690 CTNNA3Q9UI47 895 aa4.7□□□□□ -1.66
ATM-221ENST00000533690 PHF8Q9UPP1 1060 aa4.7□□□□□ -1.66
ATM-221ENST00000533690 BHMG1C9JSJ3 638 aaPredicted RBP4.7□□□□□ -1.66
ATM-221ENST00000533690 GRM8O00222 908 aa4.7□□□□□ -1.66
ATM-221ENST00000533690 ONECUT3O60422 494 aaPredicted RBP4.7□□□□□ -1.66
ATM-221ENST00000533690 HCLS1P14317 486 aaPredicted RBP4.7□□□□□ -1.66
ATM-221ENST00000533690 SARSP49591 514 aaKnown RBP4.7□□□□□ -1.66
ATM-221ENST00000533690 RCAN1P53805 252 aa4.7□□□□□ -1.66
ATM-221ENST00000533690 NMIQ13287 307 aaPredicted RBP4.7□□□□□ -1.66
ATM-221ENST00000533690 NOLC1Q14978 699 aaKnown RBP eCLIP4.7□□□□□ -1.66
ATM-221ENST00000533690 PTPAQ15257 358 aa4.7□□□□□ -1.66
ATM-221ENST00000533690 AXDND1Q5T1B0 1012 aaPredicted RBP4.7□□□□□ -1.66
ATM-221ENST00000533690 TSHZ3Q63HK5 1081 aa4.7□□□□□ -1.66
ATM-221ENST00000533690 FAM200AQ8TCP9 573 aa4.7□□□□□ -1.66
ATM-221ENST00000533690 MTA3Q9BTC8 594 aa4.7□□□□□ -1.66
ATM-221ENST00000533690 RTEL1Q9NZ71 1219 aa4.7□□□□□ -1.66
ATM-221ENST00000533690 ZSCAN21Q9Y5A6 473 aaPredicted RBP4.7□□□□□ -1.66
ATM-221ENST00000533690 SPATA31A3Q5VYP0 1347 aa4.69□□□□□ -1.66
ATM-221ENST00000533690 PHF14O94880 888 aa4.69□□□□□ -1.66
ATM-221ENST00000533690 NEK4P51957 841 aa4.69□□□□□ -1.66
ATM-221ENST00000533690 NECTIN2Q92692 538 aa4.69□□□□□ -1.66
ATM-221ENST00000533690 SHISA4Q96DD7 197 aa4.69□□□□□ -1.66
ATM-221ENST00000533690 TIGD1Q96MW7 591 aa4.69□□□□□ -1.66
ATM-221ENST00000533690 BICC1Q9H694 974 aaKnown RBP4.69□□□□□ -1.66
ATM-221ENST00000533690 MIS18AQ9NYP9 233 aa4.69□□□□□ -1.66
ATM-221ENST00000533690 CLEC11AQ9Y240 323 aa4.69□□□□□ -1.66
ATM-221ENST00000533690 RBM8AQ9Y5S9 174 aaKnown RBP4.69□□□□□ -1.66
ATM-221ENST00000533690 COL11A2P13942 1736 aaPredicted RBP4.69□□□□□ -1.66
ATM-221ENST00000533690 PDS5AQ29RF7 1337 aaKnown RBP4.69□□□□□ -1.66
ATM-221ENST00000533690 UBN2Q6ZU65 1347 aa4.69□□□□□ -1.66
ATM-221ENST00000533690 PRAMEF22A3QJZ6 481 aa4.69□□□□□ -1.66
ATM-221ENST00000533690 NBPF26B4DH59 902 aa4.69□□□□□ -1.66
ATM-221ENST00000533690 UBTFL1P0CB47 393 aaPredicted RBP4.69□□□□□ -1.66
ATM-221ENST00000533690 LIG1P18858 919 aa4.69□□□□□ -1.66
ATM-221ENST00000533690 GJB2P29033 226 aa4.69□□□□□ -1.66
ATM-221ENST00000533690 ANTXR2P58335 489 aa4.69□□□□□ -1.66
ATM-221ENST00000533690 ALX1Q15699 326 aa4.69□□□□□ -1.66
ATM-221ENST00000533690 CCDC144BQ3MJ40 725 aa4.69□□□□□ -1.66
ATM-221ENST00000533690 TNNI3KQ59H18 835 aa4.69□□□□□ -1.66
ATM-221ENST00000533690 NBPF14Q5TI25 921 aa4.69□□□□□ -1.66
ATM-221ENST00000533690 NBPF10Q6P3W6 841 aaKnown RBP4.69□□□□□ -1.66
ATM-221ENST00000533690 CCDC144CPQ8IYA2 1237 aa4.69□□□□□ -1.66
ATM-221ENST00000533690 NBPF15Q8N660 670 aa4.69□□□□□ -1.66
ATM-221ENST00000533690 FPGT-TNNI3KV9GXZ4 949 aa4.69□□□□□ -1.66
ATM-221ENST00000533690 TULP2O00295 520 aa4.68□□□□□ -1.66
ATM-221ENST00000533690 FGFR2P21802 821 aa4.68□□□□□ -1.66
ATM-221ENST00000533690 MCCD1P59942 119 aaPredicted RBP4.68□□□□□ -1.66
ATM-221ENST00000533690 SLC20A2Q08357 652 aa4.68□□□□□ -1.66
ATM-221ENST00000533690 SCRN1Q12765 414 aa4.68□□□□□ -1.66
ATM-221ENST00000533690 NTRK3Q16288 839 aa4.68□□□□□ -1.66
ATM-221ENST00000533690 ATP2B3Q16720 1220 aa4.68□□□□□ -1.66
ATM-221ENST00000533690 LMOD2Q6P5Q4 547 aa4.68□□□□□ -1.66
ATM-221ENST00000533690 TRIM65Q6PJ69 517 aa4.68□□□□□ -1.66
ATM-221ENST00000533690 CBX8Q9HC52 389 aa4.68□□□□□ -1.66
ATM-221ENST00000533690 DDX19AQ9NUU7 478 aaKnown RBP4.68□□□□□ -1.66
ATM-221ENST00000533690 POLR3EQ9NVU0 708 aa4.68□□□□□ -1.66
ATM-221ENST00000533690 ZNF446Q9NWS9 450 aa4.68□□□□□ -1.66
ATM-221ENST00000533690 DDX41Q9UJV9 622 aaKnown RBP4.68□□□□□ -1.66
ATM-221ENST00000533690 ADCY5O95622 1261 aa4.68□□□□□ -1.66
ATM-221ENST00000533690 CYP21A2P08686 494 aa4.68□□□□□ -1.66
ATM-221ENST00000533690 ZNF18P17022 549 aa4.68□□□□□ -1.66
ATM-221ENST00000533690 KIAA2012Q0VF49 1180 aa4.68□□□□□ -1.66
ATM-221ENST00000533690 ANKRD1Q15327 319 aa4.68□□□□□ -1.66
ATM-221ENST00000533690 ZSCAN25Q6NSZ9 544 aa4.68□□□□□ -1.66
ATM-221ENST00000533690 SH3RF1Q7Z6J0 888 aa4.68□□□□□ -1.66
ATM-221ENST00000533690 RNF25Q96BH1 459 aaPredicted RBP4.68□□□□□ -1.66
ATM-221ENST00000533690 FAM227BQ96M60 508 aa4.68□□□□□ -1.66
ATM-221ENST00000533690 ZSCAN16Q9H4T2 348 aaPredicted RBP4.68□□□□□ -1.66
ATM-221ENST00000533690 BCL2L12Q9HB09 334 aa4.68□□□□□ -1.66
ATM-221ENST00000533690 FAM217BQ9NTX9 383 aaPredicted RBP4.68□□□□□ -1.66
ATM-221ENST00000533690 IMPACTQ9P2X3 320 aa4.68□□□□□ -1.66
ATM-221ENST00000533690 ROBO3Q96MS0 1386 aa4.68□□□□□ -1.66
ATM-221ENST00000533690 MROH7-TTC4A0A0A0MT08 1334 aa4.68□□□□□ -1.66
ATM-221ENST00000533690 PI4KAP2A4QPH2 592 aa4.68□□□□□ -1.66
ATM-221ENST00000533690 GOLGA6L22H0YM25 854 aa4.68□□□□□ -1.66
ATM-221ENST00000533690 CYP27B1O15528 508 aa4.68□□□□□ -1.66
ATM-221ENST00000533690 GCP02774 474 aa4.68□□□□□ -1.66
ATM-221ENST00000533690 MCCP23508 829 aa4.68□□□□□ -1.66
ATM-221ENST00000533690 U2AF2P26368 475 aaKnown RBP eCLIP4.68□□□□□ -1.663e-7■■□□□ 11.5
ATM-221ENST00000533690 ARID4AP29374 1257 aaPredicted RBP4.68□□□□□ -1.66
ATM-221ENST00000533690 HDGFL1Q5TGJ6 251 aa4.68□□□□□ -1.66
ATM-221ENST00000533690 ZNF790Q6PG37 636 aa4.68□□□□□ -1.66
ATM-221ENST00000533690 ZNF662Q6ZS27 426 aa4.68□□□□□ -1.66
ATM-221ENST00000533690 BARGINQ6ZT62 677 aa4.68□□□□□ -1.66
ATM-221ENST00000533690 CREBRFQ8IUR6 639 aa4.68□□□□□ -1.66
ATM-221ENST00000533690 PI4KAP1Q8N8J0 262 aa4.68□□□□□ -1.66
ATM-221ENST00000533690 TNFRSF25Q93038 417 aa4.68□□□□□ -1.66
ATM-221ENST00000533690 MED15Q96RN5 788 aa4.68□□□□□ -1.66
ATM-221ENST00000533690 EIF4ENIF1Q9NRA8 985 aaKnown RBP4.68□□□□□ -1.66
ATM-221ENST00000533690 INTS13Q9NVM9 706 aa4.68□□□□□ -1.66
ATM-221ENST00000533690 MAP3K2Q9Y2U5 619 aa4.68□□□□□ -1.66
ATM-221ENST00000533690 SMTNL1A8MU46 457 aa4.67□□□□□ -1.66
ATM-221ENST00000533690 IKBKBO14920 756 aa4.67□□□□□ -1.66
ATM-221ENST00000533690 GTF2E1P29083 439 aaPredicted RBP4.67□□□□□ -1.66
ATM-221ENST00000533690 NOVP48745 357 aa4.67□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms